LOCUS       NM_029472                964 bp    mRNA    linear   ROD 01-JUN-2024
DEFINITION  Mus musculus glutathione S-transferase, theta 4 (Gstt4), mRNA.
ACCESSION   NM_029472
VERSION     NM_029472.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 964)
  AUTHORS   Endoh-Yamagami,S., Karkar,K.M., May,S.R., Cobos,I., Thwin,M.T.,
            Long,J.E., Ashique,A.M., Zarbalis,K., Rubenstein,J.L. and
            Peterson,A.S.
  TITLE     A mutation in the pericentrin gene causes abnormal interneuron
            migration to the olfactory bulb in mice
  JOURNAL   Dev Biol 340 (1), 41-53 (2010)
   PUBMED   20096683
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC142499.9 and AK016340.1.
            
            On Apr 13, 2010 this sequence version replaced NM_029472.2.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC061011.1, CA466071.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            CDS uses downstream in-frame AUG :: upstream AUG and CDS extension
                                                is not conserved
            RefSeq Select criteria           :: based on conservation,
                                                expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-81                AC142499.9         101675-101755
            82-961              AK016340.1         66-945
            962-964             AC142499.9         109273-109275
FEATURES             Location/Qualifiers
     source          1..964
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="10"
                     /map="10 38.58 cM"
     gene            1..964
                     /gene="Gstt4"
                     /gene_synonym="4930583C14Rik"
                     /note="glutathione S-transferase, theta 4"
                     /db_xref="GeneID:75886"
                     /db_xref="MGI:MGI:1923136"
     exon            1..232
                     /gene="Gstt4"
                     /gene_synonym="4930583C14Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             121..843
                     /gene="Gstt4"
                     /gene_synonym="4930583C14Rik"
                     /EC_number="2.5.1.18"
                     /note="GST class-theta-4"
                     /codon_start=1
                     /product="glutathione S-transferase theta-4"
                     /protein_id="NP_083748.3"
                     /db_xref="CCDS:CCDS23933.1"
                     /db_xref="GeneID:75886"
                     /db_xref="MGI:MGI:1923136"
                     /translation="MGLELYMDLLSAPCRAVYIFARKNGIPFDFQFVDLLKGHHHSKE
                     YIEINPLRKLPSLKDGKFILSESVAILFYLCRKYSAPSHWYPPDLHMRARVDEFMAWQ
                     HTAIQVPMSKILWIKLIIPMITGEEVPTERLEKTLDEVKRNLQQFEEKFLQDKMFITG
                     DHISLADLVALVEMMQPMGSNHNVFVSSKLAEWRMRVELAIGSGLFWEAHERLVKLPN
                     WDCSTLDPTIKMRICDFLQKFK"
     exon            233..320
                     /gene="Gstt4"
                     /gene_synonym="4930583C14Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            321..471
                     /gene="Gstt4"
                     /gene_synonym="4930583C14Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            472..648
                     /gene="Gstt4"
                     /gene_synonym="4930583C14Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            649..964
                     /gene="Gstt4"
                     /gene_synonym="4930583C14Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      940..945
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Gstt4"
                     /gene_synonym="4930583C14Rik"
                     /note="hexamer: AATAAA"
     regulatory      945..950
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Gstt4"
                     /gene_synonym="4930583C14Rik"
                     /note="hexamer: AAGAAA"
     polyA_site      960
                     /gene="Gstt4"
                     /gene_synonym="4930583C14Rik"
                     /note="major polyA site"
     polyA_site      964
                     /gene="Gstt4"
                     /gene_synonym="4930583C14Rik"
                     /note="major polyA site"
ORIGIN      
        1 agaatgcagg ttcctcagat caggagggag agggcccaga gccaggtgct caggctagcc
       61 ccaggctggg tctgtgggac acccgctgta gctgtgggcc ccctaataaa gcatttcaac
      121 atgggcctgg agctgtacat ggatctgctg tcggcgcctt gccgcgctgt ctacattttt
      181 gccaggaaga atggcatccc cttcgacttc caatttgtgg atctattaaa aggtcaccac
      241 catagcaagg aatacatcga aatcaacccc ctgaggaagc ttcccagcct caaggacggc
      301 aagttcatct tatctgaaag tgtggctatc ctcttctacc tatgtcgcaa gtacagtgcg
      361 ccttcccatt ggtacccacc ggatctgcac atgcgtgccc gcgtggacga gtttatggcc
      421 tggcagcata cagctattca ggtgcccatg agcaagatcc tgtggattaa gttgataatc
      481 ccaatgatca cgggtgagga ggttcccact gagagattag agaagacact ggatgaggtg
      541 aagagaaacc tacagcaatt tgaggagaag tttctgcagg acaagatgtt catcactggg
      601 gaccatatct cactggctga cttggtggcg ctggtagaaa tgatgcagcc aatggggagt
      661 aatcacaatg tctttgtcag ctctaagctt gcagaatggc gaatgcgggt ggagttagcc
      721 atcggctctg gcctcttctg ggaggctcat gaaagactgg tgaagttacc aaactgggac
      781 tgttcgacac tagaccctac gatcaagatg aggatttgtg actttctgca gaagtttaag
      841 tgatccaaga gagcattcgt tctacagggg ccagccgtct ttgccttttg agcctctttc
      901 cctagggaag tcaccaagaa acacactgtt cctttaccta ataaaagaaa aaaaaaacct
      961 gaaa
//
