LOCUS       XM_017314411            1942 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus G protein pathway suppressor 1 (Gps1),
            transcript variant X4, mRNA.
ACCESSION   XM_017314411
VERSION     XM_017314411.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000077.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1942
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="11"
     gene            1..1942
                     /gene="Gps1"
                     /gene_synonym="Cops1; Csn1; Sgn1"
                     /note="G protein pathway suppressor 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 mRNAs, 98 ESTs, 860 long SRA reads, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 57 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:209318"
                     /db_xref="MGI:MGI:2384801"
     CDS             51..1520
                     /gene="Gps1"
                     /gene_synonym="Cops1; Csn1; Sgn1"
                     /codon_start=1
                     /product="COP9 signalosome complex subunit 1 isoform X4"
                     /protein_id="XP_017169900.1"
                     /db_xref="GeneID:209318"
                     /db_xref="MGI:MGI:2384801"
                     /translation="MPLPVQVFNLQGAVEPMQIDVDPQEDPQNAPDVNYVVENPTLDL
                     EQYAASYSGLMRIERLQFIADRCPPLRVEALKMALSFVQRTFNVDMYEEIHRKLSEAT
                     RELQNAPDAIPESGVEPPPLDTAWVEATRKKALLKLEKLDTDLKNYKGNSIKESIRRG
                     HDDLGDHYLDCGDLSNALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYV
                     SKAESTPEIAERGERDSQTQAILTKLKCAAGLAELAARKYKQAAKCFLLASFDHCDFP
                     ELLSPSNVAVYGGLCALATFDRQELQRNVISSSSFKLFLELEPQVRDIIFKFYESKYA
                     SCLKMLDEMKDNLLLDMYLAPHVRTLYTQIRNRALIQYFSPYVSADMHKMAAAFNTTV
                     AALEDELTQLILEGLINARIDSHSKILYARDVDQRSTTFEKSLLMGKEFQRRAKAMIL
                     RAAVLRNQIHVKVKSLGCEGMGGTHTASTEPSLSTAVSS"
ORIGIN      
        1 cggacgcgcc gccccggaag cgaacgtcgc cgcggcgccg ggggtggaag atgccgctgc
       61 cggttcaggt gtttaacttg cagggggccg tggaacccat gcagattgat gtcgatccgc
      121 aggaagatcc gcagaacgca cctgatgtca actatgtggt ggagaatccc accctggatc
      181 tggagcagta tgcagccagc tacagtggcc tgatgcgaat tgagcgacta cagtttattg
      241 ctgaccgttg ccctccactg agggtagagg ccttgaaaat ggctctatcc ttcgtgcaga
      301 ggaccttcaa tgtggacatg tatgaagaga tacaccggaa gctctccgag gctaccaggg
      361 agctgcagaa tgcacctgat gccatccctg agagtggagt ggagcccccg cccctggaca
      421 cagcctgggt ggaggccact cggaagaagg ctctgttgaa actggagaag ctggacacgg
      481 acttgaagaa ctataagggc aattctatca aagagagcat caggcgcggc cacgatgacc
      541 tgggtgatca ctacctggac tgtggggacc tcagcaatgc cctcaaatgt tactcacgag
      601 cccgagacta ctgcaccagt gctaagcatg tcatcaacat gtgcctcaac gtcatcaagg
      661 tcagtgtcta cttgcaaaat tggtctcatg tgttaagcta tgtcagcaag gccgagtcta
      721 ctccagagat tgctgagcgg ggagagcggg acagccagac gcaagccatc ctcaccaagc
      781 tcaagtgtgc tgcaggcttg gctgagctgg ccgcacggaa gtataagcaa gcagccaagt
      841 gcttccttct ggcttccttt gatcactgtg acttcccaga gctgctgtcc cccagcaatg
      901 tggctgtcta tggtggcctg tgtgccttag ccacctttga ccggcaggag ctgcaacgaa
      961 atgtcatctc cagcagttcc ttcaagctgt tcctggagct ggagccacag gtcagagaca
     1021 tcatcttcaa attctatgaa tccaagtatg cctcatgctt gaagatgctg gacgagatga
     1081 aggataacct gctcctggac atgtacctgg cccctcacgt caggacactg tacacccaga
     1141 ttcgtaaccg ggctcttatc caatacttca gcccctatgt gtcagctgat atgcacaaga
     1201 tggctgcagc cttcaacaca acagttgcag ctctggaaga tgagctgaca cagctcattc
     1261 tggagggcct tattaatgcc cgcatcgact cacacagcaa gatactgtat gctcgagatg
     1321 tggatcagcg tagcaccacc tttgagaagt ccctgctgat gggcaaggaa ttccaacgac
     1381 gtgccaaagc tatgattctg agagcagctg tgctccgcaa ccagatccat gtcaaggtga
     1441 agagcctggg gtgcgaggga atgggcggca ctcacacagc ctccactgaa ccctccctgt
     1501 ccactgcagt ctcctcctag agaagggagc caaggggagc tgactccagc caacagccag
     1561 tcacgcatga gtaccaacat gtgaaaggca ttcctgtgac cgtcagacca tagtctgcac
     1621 acctactctg cctgtggaag cagcacctgg gcctcctgcc tgctttcctc aagacgagag
     1681 agaccccaga ctgtgtgtgg ttcattagag cagtctggcc actggggtgc cagttcgttg
     1741 gccttccacg ctgaggtacc ctctgcagtg gtaggcagcc tgcccatatg gccacttggg
     1801 cctgactcta agtttctgcc ccagtgaaac agaccatgtg caattcccag gtaagggtac
     1861 ctcagaccct tcctgtccat gtagttccga ctgcagcagt gtcttaactg agtagtccat
     1921 taaagtacaa gttgatcatt gc
//
