LOCUS       XM_006518320            7638 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus glypican 5 (Gpc5), transcript variant X6,
            mRNA.
ACCESSION   XM_006518320
VERSION     XM_006518320.5
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000080.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_006518320.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7638
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="14"
     gene            1..7638
                     /gene="Gpc5"
                     /gene_synonym="A230034F01Rik"
                     /note="glypican 5; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 mRNAs, 7 ESTs, 80 long
                     SRA reads, 5 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 12 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:103978"
                     /db_xref="MGI:MGI:1194894"
     CDS             200..1981
                     /gene="Gpc5"
                     /gene_synonym="A230034F01Rik"
                     /codon_start=1
                     /product="glypican-5 isoform X6"
                     /protein_id="XP_006518383.1"
                     /db_xref="GeneID:103978"
                     /db_xref="MGI:MGI:1194894"
                     /translation="MLSMRSAASQPQGFRGESGALAGEAAVPSRSSRGRLRIEPLPDS
                     ATHLPPALPMLGALESEDHSGEGATRTPRMDARTWRLGWRCLLLLALLGSTRSEGVES
                     CEEVRKLFQWRLGGAVKGLPEAPRAGPDLQVCLSKNPTCCTRKMEERYQIAARQDLQQ
                     VLQTSSSTLKLLISRNAAAFQETLETLIRQAENYTSILFCNTYRNMALEAAASIQEFF
                     TDVGLYLFGADVNPEEFVNRFFDSLFPLVYNHLINPGVTDSSLQYSECIRMARQDVSP
                     FGNIPKRVMGQMGRSLLPGRTFLQALNLGIEVINTTDHIHFSKECSRALLKMQYCPHC
                     QSLMLSKPCMGYCLNVIRGCLAHMTELNPHWHAYIRSLEELSDAMHGTYDVEHVLLNF
                     HLLVNDAVLQAHLNGQKLLDQVNTICGHPVRTPTQSPRCTFDPSKEKHGMKISARNGE
                     ETLANRRKEFINSLRLHGSFYGGLADQLCVNELAAPEGRPCWNGEEIVKSYAQRVVGN
                     GIKAQSANPEVRVRGTDPVVNQIIDKLKHVIQLLRGRSPKPNKWELLQPGSGGGMLEN
                     SSGDCDDEDGCGGSGSGEVKRTLKITN"
ORIGIN      
        1 gtggcctgtt cgcggggttg gcgaaccggg ctctggagct ccgcaggctg gcacagccta
       61 ggttagtggc tgcgagctga gccttaggcg gctgcagcga taccggccag tgccggatgc
      121 ttgccgtgtc tcgcttctcc ccggctcgtg ttcggcttgc gcagcgccca cccgccctgg
      181 tccgggaggg acccgggcga tgctaagcat gagaagtgca gcgtctcagc ctcagggctt
      241 caggggagaa agcggagctc ttgcaggtga agccgcggtc ccttcgcggt cttcccgtgg
      301 ccgcctgcgc atcgaaccct tgccagattc cgccacgcat cttcctcccg cgctgccgat
      361 gctgggtgct ctggagagtg aggaccacag cggggagggc gcgacccgaa caccgaggat
      421 ggatgcccgc acctggcgtc tgggctggcg ctgtctcctt ctcctggctc tccttggatc
      481 tacccgaagc gagggcgtgg agagctgcga agaagttcgg aaacttttcc agtggcggct
      541 tgggggagct gtcaaagggc tgccggaggc gccgcgggca ggacctgatc ttcaggtttg
      601 cctatccaaa aacccaacgt gctgtaccag gaagatggag gagaggtacc agattgcagc
      661 tcggcaagat ttgcagcagg tgcttcagac atccagctca acattaaagt tgctaatatc
      721 tcgaaatgca gctgcttttc aagagaccct ggaaaccctc atcagacaag cagagaatta
      781 caccagtatc cttttctgca acacctaccg gaacatggcc ttggaggctg ctgcttccat
      841 tcaggaattt ttcacggatg ttggactcta tttatttggt gcggatgtta atcccgagga
      901 atttgtaaac agattctttg acagtctttt tcctctggtc tacaaccatc ttataaaccc
      961 tggtgtgact gacagttctc tgcaatactc agaatgcatt cgaatggccc gccaggatgt
     1021 tagtccattt ggcaacattc ccaaaagagt catggggcag atggggaggt cgctgctgcc
     1081 tggccgcaca ttcttgcagg cgcttaatct gggcattgag gtcatcaaca ccacggacca
     1141 catacacttc tccaaggagt gcagtagggc cctcctgaag atgcagtatt gtcctcactg
     1201 ccagagcctg atgctcagta agccctgtat ggggtactgc ctcaatgtca tcaggggctg
     1261 cctggcccac atgactgagc ttaatccaca ctggcatgct tatatccggt ctttggaaga
     1321 gttgtcagat gcgatgcacg gaacctacga cgttgaacac gtgctcctga acttccactt
     1381 gcttgttaat gatgccgtgt tgcaggctca cctcaatggg cagaaattat tggatcaggt
     1441 gaatacgatt tgtggccatc cagtgagaac accaacacag agcccccgct gtacttttga
     1501 cccaagcaaa gagaaacatg gaatgaagat ctctgcaagg aatggtgaag agacacttgc
     1561 caacagaaga aaagaattca tcaatagcct taggctgcat gggtccttct atggtggcct
     1621 ggctgaccag ctttgtgtta atgaattggc tgcccctgaa ggaaggccct gctggaatgg
     1681 ggaggaaata gtcaaaagct atgctcagcg tgtggttggg aatggaatca aagcccagtc
     1741 tgcaaatcct gaagtcagag tcagaggaac cgatcctgtg gtaaatcaga tcattgataa
     1801 actgaagcat gtcatccagt tgttacgggg gagatcaccc aagcccaaca agtgggagct
     1861 ccttcagcca ggcagtggag gcggcatgct tgagaactct agtggagact gtgatgacga
     1921 agatggctgt ggaggatcag gaagcggaga agtaaagagg accctgaaga tcacaaactg
     1981 atgtgtaagc ttgaccacag aatggttgct ctaatagctg gattctagct gaaccagact
     2041 gtctcagcct ccgcacaagc atttccttga acatcccaaa ctccagctga agtcataact
     2101 gagtcacagt agctgtcttc catgaaggag ccattaaggt ggagttggtg atcaggcatg
     2161 attttcacag tgtcttttac tgccaaaggc tttatccagt gatgctctct ctgttcccgt
     2221 gagtgcacaa gagcacctag agttctagtt tgttcgttat ttttaatact aactcttgct
     2281 tctaaagacc taagcctgtt ttatgtgatc actaggctcc tgctttgttc ttgaccatag
     2341 aacacaacat ttttataaga gaccggtatc tgtacacatc caacagataa atgcttagac
     2401 ttgaagcaca aaaagacaag ggcaacctat agatgcatta actacacttt aaatttttaa
     2461 ttttaaaact aagcttgaat ttaaacaaaa ccatataact tggaatgctt gtattttatt
     2521 ggttttgcct gagaacagca tggacctaga tgtgaatctg aagtctgaca tttactgatt
     2581 caacatcctt ttcctttaca ttgtactaaa tggctacaac atgcacatgg cattatcact
     2641 taaagtgaaa cctgtaggtg tctatagccc acctggatga cacacaggga gttttgtgct
     2701 tctgggccaa atcctgtccc tgcctgccca ggccaaatgg ctaggtggag agacccattc
     2761 acccgcagta atctctgcag tgctgatagg ctccttgcga ttaattaaga ctacagtcta
     2821 aaatggcttt gctagtatct ttttcaacaa ttgtgttgat agcacataca ctgtaaaatt
     2881 atattttaac ccaaggggaa ggaaaactat gaaagacaat tggaaaaaaa tatagaaatg
     2941 cacacttgag tccaattgtc tttttgtgaa agtatttgta gtgatgagaa aagacatctc
     3001 tcaatgcttc acctccaggt tttatgatca cacgcgatct gaactgtgtc acagtacttt
     3061 ctgatagtac atggtaaaga gccattgttt tctcagtgtg gaacctatga cttgtgaata
     3121 tggaattttt ccactactaa acctctatat taattatgat gcatctatca tttgtcatga
     3181 aggtgacacc tgtcccacac caacgattaa cagtgtgggt gtgtgtctct gattatttcc
     3241 agaagtctag gatagctctg tctcttatag tgtaagaaaa cttactttat aacagacacc
     3301 tgaaatctcc tctataacgc ttaaaaaatt cactatcaga accaaaatac acaattgttg
     3361 tattaaaaaa agttcagata ataaacagct tccaatttat tctgggaaag tgttttctgt
     3421 ttggggaaaa atgtagctaa tgagtgaatt caatcaagca aacaaaaaat gaacgcaagg
     3481 tctctcttgg tgtgctgagt aattaatgct ttgaatatgt gactcattgc tatgtgttaa
     3541 tgctaactgc aatggagatt ttccttattc tcattacagt ttttctcagg tattttatat
     3601 gcaatagaca tatattaatt atattcacag gactgtagaa atatcactat ctctttcctg
     3661 aatttggacc cctctacgta attttgaata gcacttcttt gtggggtttc atgttacctt
     3721 atacctgttg tttatatcca tataggagcc tgaggaaaag taggtgctat tcctttcatt
     3781 tttcttagta tgtatttatt gtataaaaca actggtttca ttatgacatt tccattcatg
     3841 catactatat agtttaatca tatacttccc ctcctcagaa aatgttaaag tactgacaca
     3901 ctaaattcat attgtggttt atgtaaatgg taagaaaata catattcata gagtataaag
     3961 ttatagtttt aaacacagcc ctcagatgaa gttgaaagga aacacaacca aaatccagtg
     4021 atgagcaaga agaactcaga tttccaattt atccccaaaa ctgatttaca ttaaatgcaa
     4081 atccaacagg gagagtcact ggacactttc aggtggtgat tatggagagc agatatgtaa
     4141 ggggaagcct gctatggaga atgtagtctt cacagaatcg aactgtgaac cctggatctg
     4201 gttgtccgca cctaaactgt ctgaaactta aaagtatcat ttaaagttca agctgtggtt
     4261 ttcaaactat tatccattat tcaaacaata attaagaagt aatttctttt ataatggtaa
     4321 ctcaatgttt tataatatga attaaagttt aaaattccag aattactcct tacctgctat
     4381 aaagttagct attagagaac agtaaaacat aagtgaaaat gaaaacaaag gcttgaaatt
     4441 aaagcattag gccaagtaat acataattat gagaaaattg atagttcggt gattccatga
     4501 cactgcgaca atgttgactt ctctgggtcc agttttgaat tatcgaatat tttttaacac
     4561 ctatgcatga ctttgcagct ctgtttgttg aaacaaaggt ggcaaagtag actacagtct
     4621 cagccacaga atccacagtg ggaagaaaat ttcaacgctt gctttatggg atatatcaac
     4681 tgtgcacttt gttttcattg agggtttatt ataggtaaaa ttagattagc aagcagggta
     4741 gaatctgtag catacgcgta gataggatgt ttatgcatgt tctttcacac ggcctttcca
     4801 aacactttta gataataaaa agtcctattt taatttggca ctggttcagc ctaatgtaaa
     4861 acaatgcctt gactcaaatc cctctctagc ataagctttg ccctctctct tatcagcctg
     4921 gcccagcatt agaaggtgac ttgctcttct ttgggggagc ctcttgatgc catgctcaac
     4981 atttgttaat tgctcaaaga tctttgtgta ggctgaaagc ctcgtgggct cacccctctg
     5041 caactatgct gcccatattg ctgtttattg tttggtcctt gttaaagctg tcatactgtt
     5101 gagaattcgt gagtgtggct tctgatacta ttagggtaca tactctcata gcaaactttg
     5161 ggattctctg gctcttaaaa ttgttctact ctatctttca aatgatcctt gaccctttga
     5221 tataggagtt ttatacacac acacacacac acacacacac acacacatct atatagatat
     5281 tgatattgat atcgacatct atatcagtat cgatatagat atatgcacac actttgggct
     5341 ctgcaactct gcatgctgat tggctgtggt tttacgtcct ggtctatttc tattccaaga
     5401 agtcatttcc tgtgttagag gttagaaata cactttgctg tgtgtgtagt gacaggtact
     5461 tagaatggag gtgttatggt agtttaataa agtggtggtt gtagattctt attcaagacc
     5521 tacaaattca ctagctctag ataggtggtt agatttccag taccaggcat gattttcctt
     5581 atgttgagca gatcttaagt gcaattggtt accaccatgg tatatgtgcc actgctacac
     5641 cctgagtgtt atggtaccat gctgctcatt gctctggttt gtagatttca tgctgggtaa
     5701 gactgttagt cattttcctg ctatgaaagc ttacatggta cctcagagag aaagctttca
     5761 ggccaatttt agctccaggc ttctgggcct tgtgtataaa gtcttgtgtc ttcaacaaat
     5821 ggaaacttac attctacagc ttaggggtta gccaaagaca gtgataatat ctgtaatgtt
     5881 ttgagacttg gatataagac ttacttctga ccgataactc aaaagaaagc atctcttacg
     5941 tgctgttgga atgttttgtt aggtcatctt ttgcatttgg agcaatgtca gacagatgga
     6001 aaattgtcat ttaaccttat atgtatattt atatgccgac ttacatttct tatatccatt
     6061 ttttagataa attgtttata cttccttata aattttcaga catcttactg ataccttacc
     6121 ctctttcttc tgcatttata tccctctctc tccctaatta gatcacccac cacaatttcc
     6181 cacttctatt tataagaatt taacagcaag acacattcat tctatttgct gccctaacac
     6241 acatcattcc acttgctaac tttctctttg attgtattta tattttgttt taatctgatc
     6301 atgattactg ttgaaattta ttacagttta tgagttttta agaacactca accttaatta
     6361 ttgtaaaaaa tccatttcat atactctaaa gcattggtat tattttacct tacagtattg
     6421 ttgtccaatc tggctttggt ttggggtaat aagatttgtt catagtgttt tatttttatt
     6481 aaaaataaat tgtaggagct ttgtttctat tttaagcata tctacagtat gaaacattta
     6541 caatagagaa acgcttcaag cttagaacag aaatctatgg gaaatctctc aatacacact
     6601 cacacacaca cgcatacgca cacacacaca catgcacaca cgcacgcaca cacacactca
     6661 cacgcacatg cacaagtaga ttatcaaact gcattagtta aggagctcct ttagaatttc
     6721 agaaagagtg aatattttgt ccagaatgaa gagtctcttt tgaaggttag atttctatat
     6781 ttattgatat gccctttgat ggatcctttt ccaagacaac tttgaaaagc aagatttctg
     6841 tgtgtcctag cttggtggac tatttccatt tcccatattg cacttcttct tatgatacaa
     6901 ggctttagct tctgtcattt cactaaaacc caccccttaa gtaaccaaat gtaatcctta
     6961 actgcctaaa cttagaaacc ccagtcaaat attaaacatc gtttcatttt aaaatctgta
     7021 ttctttgaga gatctaaaga tattatgtct tttaaaatat tttatatgct atcattattg
     7081 gctaggtttt tagtatccgg gcacgatttc cctcttgtta ggcaggtttc aactggagaa
     7141 ctgttggtta ccaccaaggt actggtgcca ctactgcatc ttcagggata atatgctatg
     7201 ggagttattc ctttggttta taggactctt ggttgcttct ctcctctgga agcctgcatg
     7261 ataccacaga gaggaggctc tctcatcagt tccaactgtg aactttaagt aaagttagtt
     7321 ttattatttt tattcacaca gatatatggg gatatttttt aaatgtttcc ttagtatgtg
     7381 atattactat aaaaatatca tctgaggatt ttttttatta cttaactcca aaactttgtc
     7441 tttgtttatt cattgttgat tttttaaact gcacacagaa tgacttttaa tgcaaaatta
     7501 tcagcacaat taactaaaga tatatccaaa atgagttcta tcagtctgcc aggcaaagaa
     7561 gttcacacta atgaagaatt tgagtaattg tataaggtat ggggaaaatc ataacttacc
     7621 agtgctctga aggtgaaa
//
