LOCUS       NM_172876               2003 bp    mRNA    linear   ROD 01-JUN-2024
DEFINITION  Mus musculus G patch domain containing 3 (Gpatch3), mRNA.
ACCESSION   NM_172876 XM_908057
VERSION     NM_172876.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2003)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AK053051.1.
            
            On Apr 5, 2007 this sequence version replaced NM_172876.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK053051.1, BC096468.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-2003              AK053051.1         2-2004
FEATURES             Location/Qualifiers
     source          1..2003
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4 66.25 cM"
     gene            1..2003
                     /gene="Gpatch3"
                     /gene_synonym="D930035B09Rik; Gpatc3"
                     /note="G patch domain containing 3"
                     /db_xref="GeneID:242691"
                     /db_xref="MGI:MGI:2442492"
     exon            1..466
                     /gene="Gpatch3"
                     /gene_synonym="D930035B09Rik; Gpatc3"
                     /inference="alignment:Splign:2.1.0"
     CDS             16..1593
                     /gene="Gpatch3"
                     /gene_synonym="D930035B09Rik; Gpatc3"
                     /codon_start=1
                     /product="G patch domain-containing protein 3"
                     /protein_id="NP_766464.1"
                     /db_xref="CCDS:CCDS18752.1"
                     /db_xref="GeneID:242691"
                     /db_xref="MGI:MGI:2442492"
                     /translation="MASPRELDEESPVYLVVSGIPAVLRSAQLRSYFSQFREQRGGGF
                     LCFHYRHRPERGPPQASPEAARAGPDPAAEDPVLAQAPASDARAVRARGSAAAQTRTC
                     CCVVSVRGAAQAQRLLRMYSGRRWLDSQGTWLPGRCLIRRLRLPTEVSDLGSFPFKTR
                     KELQSRRAENEAFTLADLKQLPELNPPVLMPNGNVGTPLRVFLELIRSCRLPPRIITQ
                     LQLQFPKTGSSRRYGNVPFLYEDSETVEQEEHVYTAEGEEIPQGSCSEDPAAGSFDEP
                     EDEGQQQEEEEESGSEEDDDRGEEWERHEALHEDVTGQERTTERLFEEEIELKWEKGG
                     SGLVFYTDAQFWQEEEGDFDEQTADDWDVDMSVYYDRDGGDKDARDSVQMRLERRLRE
                     GQEDGSVLGGQVGTFERHTKGIGRKVMERQGWAEGQGLGSRCSGVPEALDGDGQHPRC
                     KRGLGYHGEKLQPFRQLKRPRRTGLGLISTIYDEPLPQDQGETLLRRQPPTSMKFRTD
                     MTFVKGSSCALDRPEPE"
     exon            467..894
                     /gene="Gpatch3"
                     /gene_synonym="D930035B09Rik; Gpatc3"
                     /inference="alignment:Splign:2.1.0"
     exon            895..1069
                     /gene="Gpatch3"
                     /gene_synonym="D930035B09Rik; Gpatc3"
                     /inference="alignment:Splign:2.1.0"
     exon            1070..1129
                     /gene="Gpatch3"
                     /gene_synonym="D930035B09Rik; Gpatc3"
                     /inference="alignment:Splign:2.1.0"
     exon            1130..1251
                     /gene="Gpatch3"
                     /gene_synonym="D930035B09Rik; Gpatc3"
                     /inference="alignment:Splign:2.1.0"
     exon            1252..1379
                     /gene="Gpatch3"
                     /gene_synonym="D930035B09Rik; Gpatc3"
                     /inference="alignment:Splign:2.1.0"
     exon            1380..2003
                     /gene="Gpatch3"
                     /gene_synonym="D930035B09Rik; Gpatc3"
                     /inference="alignment:Splign:2.1.0"
     polyA_site      2003
                     /gene="Gpatch3"
                     /gene_synonym="D930035B09Rik; Gpatc3"
                     /note="putative"
ORIGIN      
        1 atgtgacagg ccaagatggc gtcgcccagg gagctggacg aagagtcgcc ggtttacctg
       61 gtggtgagcg ggatccctgc cgtgttacgc tcggctcagt tacggagcta ctttagccag
      121 ttccgggaac agcgcggcgg aggcttcctg tgcttccact accggcaccg gcccgagagg
      181 ggccctccgc aggcgagtcc cgaggcggcc cgggctggcc cggaccccgc cgctgaggat
      241 ccggttctcg cccaggctcc ggcctccgat gcccgcgctg tccgcgcccg gggctctgcg
      301 gcagcccaga cccgcacctg ctgctgcgtc gtctcggtga ggggagcggc gcaagcccag
      361 cggctgcttc gcatgtactc cggtcgccgg tggctggact ctcaggggac ctggcttccc
      421 ggtcgctgtc tcatccgcag gcttaggctt cccaccgagg tttcagatct ggggtccttt
      481 ccctttaaga cccggaagga actacagagt cgaagggcgg agaatgaagc ttttaccctg
      541 gctgacctga agcagctccc ggagctgaat ccgccagtgc tgatgcccaa tggcaatgtg
      601 ggcacccccc tgcgggtctt tttagagttg atccggtcct gccgtctacc acctagaatc
      661 attacccagc tacagctcca gtttcccaag accggctcct cccggcgcta tggcaacgtg
      721 ccctttctgt atgaggactc agagactgtg gagcaagaag agcacgtgta cacagcagaa
      781 ggggaggaga tcccccaggg gagctgctcg gaagatccag cagctggctc ctttgatgag
      841 ccggaggatg aagggcagca gcaggaggag gaggaggagt ctggctcaga agaggacgat
      901 gaccggggtg aggagtggga gcgacacgaa gctctgcacg aggatgtgac cgggcaggag
      961 cggactacag agcggctctt cgaggaggag attgaactta agtgggagaa aggtggctct
     1021 ggcctcgtgt tctacaccga cgctcagttc tggcaggagg aggaaggaga ttttgatgag
     1081 cagacagctg atgactggga cgtggacatg agcgtctact acgacagaga tggaggagac
     1141 aaggatgccc gtgactctgt ccaaatgcgc ctggaacgga gactccgtga gggtcaggaa
     1201 gatggctctg tgctaggtgg ccaagtcggc acctttgagc gccacaccaa gggcatcggc
     1261 cggaaggtga tggagcgcca gggctgggct gaaggccagg gcctgggcag caggtgctcc
     1321 ggggtgcctg aggccctgga tggagatggc cagcatccta gatgcaagcg cggcttggga
     1381 taccatggag agaagttaca gccatttagg caactgaaga ggccccgtcg aactggcttg
     1441 gggctcattt ccaccatcta tgatgagcct ctgccccaag accaggggga gaccttgctc
     1501 cggcgccagc cacccaccag catgaagttt cggacagata tgacttttgt gaagggttct
     1561 agctgtgcct tggacagacc tgagcccgag tgagcctatg tccttggtca ggatcactct
     1621 gcggcaggga cttagccctc tgcctggatc ttgccctgtg gacctgagaa gcagcccaga
     1681 gcctgggagc agccctgagc atgcccagtt tctctacctc aaagatgata tcaccaaaag
     1741 cccctccgtc tcctggggtg tttgtgccta aaggccttcc cttggtctcc aggccctagt
     1801 gcttgtttgg gtttgcccag aacagtgaag atctggactg cctgtggcac cgtccagtcg
     1861 ggtttgaggg ttgtctgaag agctccgtga agctgggaaa ggggaccaga gaattgatcc
     1921 agagagcgtc gcggtccctt accacgtcta ccctctgcct agagacggat cggtgcgaga
     1981 ataaaccagt ttacccggca tgg
//
