LOCUS       NM_026181               3057 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus G patch domain containing 1 (Gpatch1), mRNA.
ACCESSION   NM_026181
VERSION     NM_026181.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3057)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 3057)
  AUTHORS   Perez-Garcia,V., Fineberg,E., Wilson,R., Murray,A., Mazzeo,C.I.,
            Tudor,C., Sienerth,A., White,J.K., Tuck,E., Ryder,E.J., Gleeson,D.,
            Siragher,E., Wardle-Jones,H., Staudt,N., Wali,N., Collins,J.,
            Geyer,S., Busch-Nentwich,E.M., Galli,A., Smith,J.C., Robertson,E.,
            Adams,D.J., Weninger,W.J., Mohun,T. and Hemberger,M.
  TITLE     Placentation defects are highly prevalent in embryonic lethal mouse
            mutants
  JOURNAL   Nature 555 (7697), 463-468 (2018)
   PUBMED   29539633
REFERENCE   3  (bases 1 to 3057)
  AUTHORS   Hoffman,B.G., Zavaglia,B., Witzsche,J., Ruiz de Algara,T.,
            Beach,M., Hoodless,P.A., Jones,S.J., Marra,M.A. and Helgason,C.D.
  TITLE     Identification of transcripts with enriched expression in the
            developing and adult pancreas
  JOURNAL   Genome Biol 9 (6), R99 (2008)
   PUBMED   18554416
REFERENCE   4  (bases 1 to 3057)
  AUTHORS   McKee,A.E., Minet,E., Stern,C., Riahi,S., Stiles,C.D. and
            Silver,P.A.
  TITLE     A genome-wide in situ hybridization map of RNA-binding proteins
            reveals anatomically restricted expression in the developing mouse
            brain
  JOURNAL   BMC Dev Biol 5, 14 (2005)
   PUBMED   16033648
  REMARK    Publication Status: Online-Only
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AK004868.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK004868.1, BC132155.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849375 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3057
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 21.27 cM"
     gene            1..3057
                     /gene="Gpatch1"
                     /gene_synonym="1300003A17Rik; ECGP; Gpatc1"
                     /note="G patch domain containing 1"
                     /db_xref="GeneID:67471"
                     /db_xref="MGI:MGI:1914721"
     exon            1..100
                     /gene="Gpatch1"
                     /gene_synonym="1300003A17Rik; ECGP; Gpatc1"
                     /inference="alignment:Splign:2.1.0"
     CDS             28..2820
                     /gene="Gpatch1"
                     /gene_synonym="1300003A17Rik; ECGP; Gpatc1"
                     /note="evolutionarily conserved G-patch domain containing"
                     /codon_start=1
                     /product="G patch domain-containing protein 1"
                     /protein_id="NP_080457.1"
                     /db_xref="CCDS:CCDS21147.1"
                     /db_xref="GeneID:67471"
                     /db_xref="MGI:MGI:1914721"
                     /translation="MAALDSDSDEDLISYGTGLEPLDEGERPKKPIPLQDQTVRDEKG
                     RYKRFHGAFSGGFSAGYFNTVGSKEGWTPSTFVSSRQNRADKSALGPEDFMDEEDLSE
                     FGIAPKAIVTTDDFASKTKDRIREKARQLAAAAAPIPGATLLDDLITPAKLSVGFELL
                     RKMGWKEGQGVGPRVKRKARRQKPDPGVKIYGCALPPGGSEESEDEDDDYLPDNVTFA
                     PKDVMPVDFTPKDNVHGLAYKGLDPHQALFGMPGEHLNLFGGASEGTSHLLGDVGLSK
                     GRKLGISGQAFGVGALEEEDDDIYATETLSKYDTVLKDEEPGDGLYGWTAPKQYKNQK
                     EPERDLRYVGKILEGFSLASKPLSSKKIYPPPQLPRDYRPVHYFRPVVAATAENAHVL
                     QVLSESSGKAGQDVGTHSRHQLNASKRGELLGEMPIQGSATSVLEFLSQKDKERIKEV
                     KQATDLKAAQAKARSLAQSASSSRAQASTPDLGHSSWHLALGGGTVTTRANNFKPFAK
                     DPEKQRRYEEFLVHMKKGQKDALERCLDPSMTEWERSREREEFARAAQLYVSSNSTLS
                     SRFTHAKEEEDSDQVEVPRDQENDVSDKQSAVKMKMFGKLTRDTFEWHPDKLLCKRFN
                     VPDPYPGSTLVGLPRVKRDKYSVFNFLTLPEPAPLPTAPVPSEKAPQQRGSDKSRKPS
                     RWDTSKQEKKEDSISEFLSQARSKVGPPKQESSALGSKEEQAPEPRPDTTVDKAVDAQ
                     TDGEGSRPSMDLFKAIFASSSDEKSSSSEEEQDDSEDSQEHTEEASLKGSQEAAAGET
                     SVVLAAEPEPCEPATPFPIQKAQIDEREEFGPRLPPVFCPNSRQKLEIPQKEKPKKSK
                     ERHKSKKEHRRKREKKKKHKKHKHKSKQKNKKSEKNSSSESTDSSDSGSDDGGPAELS
                     PQELLRRLKCLPLRRQ"
     exon            101..235
                     /gene="Gpatch1"
                     /gene_synonym="1300003A17Rik; ECGP; Gpatc1"
                     /inference="alignment:Splign:2.1.0"
     exon            236..321
                     /gene="Gpatch1"
                     /gene_synonym="1300003A17Rik; ECGP; Gpatc1"
                     /inference="alignment:Splign:2.1.0"
     exon            322..482
                     /gene="Gpatch1"
                     /gene_synonym="1300003A17Rik; ECGP; Gpatc1"
                     /inference="alignment:Splign:2.1.0"
     exon            483..580
                     /gene="Gpatch1"
                     /gene_synonym="1300003A17Rik; ECGP; Gpatc1"
                     /inference="alignment:Splign:2.1.0"
     exon            581..639
                     /gene="Gpatch1"
                     /gene_synonym="1300003A17Rik; ECGP; Gpatc1"
                     /inference="alignment:Splign:2.1.0"
     exon            640..882
                     /gene="Gpatch1"
                     /gene_synonym="1300003A17Rik; ECGP; Gpatc1"
                     /inference="alignment:Splign:2.1.0"
     exon            883..1030
                     /gene="Gpatch1"
                     /gene_synonym="1300003A17Rik; ECGP; Gpatc1"
                     /inference="alignment:Splign:2.1.0"
     exon            1031..1110
                     /gene="Gpatch1"
                     /gene_synonym="1300003A17Rik; ECGP; Gpatc1"
                     /inference="alignment:Splign:2.1.0"
     exon            1111..1315
                     /gene="Gpatch1"
                     /gene_synonym="1300003A17Rik; ECGP; Gpatc1"
                     /inference="alignment:Splign:2.1.0"
     exon            1316..1612
                     /gene="Gpatch1"
                     /gene_synonym="1300003A17Rik; ECGP; Gpatc1"
                     /inference="alignment:Splign:2.1.0"
     exon            1613..1791
                     /gene="Gpatch1"
                     /gene_synonym="1300003A17Rik; ECGP; Gpatc1"
                     /inference="alignment:Splign:2.1.0"
     exon            1792..1919
                     /gene="Gpatch1"
                     /gene_synonym="1300003A17Rik; ECGP; Gpatc1"
                     /inference="alignment:Splign:2.1.0"
     exon            1920..2056
                     /gene="Gpatch1"
                     /gene_synonym="1300003A17Rik; ECGP; Gpatc1"
                     /inference="alignment:Splign:2.1.0"
     exon            2057..2220
                     /gene="Gpatch1"
                     /gene_synonym="1300003A17Rik; ECGP; Gpatc1"
                     /inference="alignment:Splign:2.1.0"
     exon            2221..2434
                     /gene="Gpatch1"
                     /gene_synonym="1300003A17Rik; ECGP; Gpatc1"
                     /inference="alignment:Splign:2.1.0"
     exon            2435..2542
                     /gene="Gpatch1"
                     /gene_synonym="1300003A17Rik; ECGP; Gpatc1"
                     /inference="alignment:Splign:2.1.0"
     exon            2543..2640
                     /gene="Gpatch1"
                     /gene_synonym="1300003A17Rik; ECGP; Gpatc1"
                     /inference="alignment:Splign:2.1.0"
     exon            2641..2789
                     /gene="Gpatch1"
                     /gene_synonym="1300003A17Rik; ECGP; Gpatc1"
                     /inference="alignment:Splign:2.1.0"
     exon            2790..3057
                     /gene="Gpatch1"
                     /gene_synonym="1300003A17Rik; ECGP; Gpatc1"
                     /inference="alignment:Splign:2.1.0"
     polyA_site      3057
                     /gene="Gpatch1"
                     /gene_synonym="1300003A17Rik; ECGP; Gpatc1"
                     /note="putative"
ORIGIN      
        1 gagggggcgg agcccggaag gagcaggatg gcggcgctgg acagtgacag cgacgaggat
       61 ctgatcagct atggaacggg cctggagcct ctggacgaag gtgaaagacc aaagaaaccc
      121 attcctctac aagaccagac tgtcagagat gagaaaggaa ggtacaagcg cttccacgga
      181 gcctttagtg gtggtttctc tgctggttac ttcaataccg tcggctcaaa ggaaggatgg
      241 acaccctcta cctttgtgtc ttcaagacag aacagggcgg acaaatctgc tcttggacct
      301 gaagatttta tggacgaaga ggatcttagt gaattcggga tagcacctaa agcaattgtt
      361 accacggatg attttgcttc caaaaccaaa gacagaatcc gggagaaggc caggcagctg
      421 gccgctgctg cagcccctat tcccggcgcc acgctgcttg atgacctcat cacaccggca
      481 aaattgtctg ttggctttga attgttaaga aaaatgggtt ggaaggaagg gcaaggagtc
      541 ggccctcggg tgaagagaaa ggcgcgccga cagaaaccag atcctggtgt gaagatctat
      601 ggctgtgcat tgccgcctgg aggctctgaa gagtctgagg atgaagatga tgactacctg
      661 cctgacaatg tgacttttgc tcctaaagac gtcatgcctg tggattttac acctaaagat
      721 aatgtacatg ggttggccta caagggcctg gacccccacc aagcattgtt tggaatgcca
      781 ggagaacacc tgaatctttt tggtggcgca tctgagggga ccagccatct tcttggagat
      841 gttggactga gtaaaggaag aaaactgggc atttctggcc aggcttttgg tgtaggtgcc
      901 ctggaagagg aagatgatga catctacgcc acagaaactc tatccaagta tgacactgtg
      961 ctgaaggacg aggagcctgg agatggcctc tatggctgga cagctcccaa acaatacaaa
     1021 aatcagaaag aacccgagag agatcttcga tatgttggca aaattttgga aggattttcc
     1081 ttggcttcta aacctttatc ttcaaagaaa atttacccgc cccctcagtt gcccagagac
     1141 taccgaccgg tgcattattt cagacctgtg gtcgccgcaa cagccgagaa tgctcacgta
     1201 cttcaggtgt tatcagagtc atctgggaaa gcagggcagg acgtggggac acacagtagg
     1261 catcaactca atgcctccaa gcggggggag ttgctaggag agatgcctat tcaagggtca
     1321 gctacttcag tgttggagtt tctgtctcaa aaagacaaag agagaattaa agaagtgaag
     1381 caggcaactg acctgaaagc cgcccaagcc aaggccagga gtctggccca gagtgcttca
     1441 agcagcagag cgcaggcgtc cacaccagac ctgggccaca gctcatggca cctggccctg
     1501 ggcggaggga cagtcaccac cagagccaac aacttcaagc cttttgccaa agatccagaa
     1561 aagcagagac gatacgaaga gttcttagta cacatgaaga agggtcagaa agatgctctg
     1621 gaacgatgcc tggaccccag catgaccgag tgggagcgaa gccgagagcg ggaagagttt
     1681 gcccgggcag cccagctcta tgtgtcctcc aactccaccc tgtcctccag gttcactcac
     1741 gccaaggagg aggaggattc agatcaggtc gaagtccctc gggaccaaga gaacgatgtc
     1801 agtgacaagc agtcggctgt gaagatgaag atgttcggga agctcacccg agacacgttt
     1861 gagtggcacc ccgacaagct tctgtgtaag aggtttaacg tcccggaccc ttatccaggc
     1921 tcaactttag ttggcttacc cagagtgaag agggataaat actcagtctt caacttcctg
     1981 acgctcccag agcctgcccc tctgcccaca gctccagtac caagtgaaaa agccccgcag
     2041 caacggggtt cagacaaatc caggaaacca tcacgatggg acacatccaa acaggagaag
     2101 aaagaggatt ccattagcga gtttttaagt caagctagat caaaagttgg acctccaaaa
     2161 caagaatcca gtgccttagg aagcaaagag gaacaggccc cagagccacg cccagacacg
     2221 actgtagaca aagctgtgga tgcacagacg gacggggaag gtagccgccc ttccatggat
     2281 ttattcaaag ccatcttcgc cagttcctct gatgaaaagt cctcatcttc ggaggaggag
     2341 caagatgata gtgaggacag tcaagagcac actgaggagg ccagccttaa aggctctcag
     2401 gaggctgctg ctggggagac ctctgtggtc cttgctgctg agccggagcc ttgtgagcct
     2461 gcaaccccct tccccatcca aaaggcacag attgacgaac gggaagagtt cgggcctcgg
     2521 ctgcctcctg tcttctgccc caactctcgc cagaaactcg agatacctca aaaagagaaa
     2581 cccaagaaga gcaaagaaag acacaagagc aaaaaggaac acagaagaaa gagagagaag
     2641 aaaaagaaac ataagaaaca caaacacaaa agtaagcaaa agaataagaa atcggaaaaa
     2701 aatagcagtt ctgagagtac agacagcagt gacagtggga gcgatgacgg agggccagca
     2761 gagctgtccc ctcaggagct gctgagaaga ctgaagtgtc tccccctaag aaggcaataa
     2821 tggagccctg ccctggcctg tctcagtctg gaggttcctc catgatgcac atccattgat
     2881 ttcccagttc atcattgtac agattgtatt tatatgtaaa ttccttctgt aaaataattt
     2941 tttaaacctt gacatttcaa aggctgccct gaaaggttgc agaaattgat ttctattttt
     3001 aacttcagtc catgttagaa ggataaaaga ctgaacagtt taattaaagt ggctttt
//
