LOCUS       NM_020585               2031 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus golgin A7 (Golga7), transcript variant 1, mRNA.
ACCESSION   NM_020585
VERSION     NM_020585.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2031)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 2031)
  AUTHORS   Koscielny,G., Yaikhom,G., Iyer,V., Meehan,T.F., Morgan,H.,
            Atienza-Herrero,J., Blake,A., Chen,C.K., Easty,R., Di Fenza,A.,
            Fiegel,T., Grifiths,M., Horne,A., Karp,N.A., Kurbatova,N.,
            Mason,J.C., Matthews,P., Oakley,D.J., Qazi,A., Regnart,J.,
            Retha,A., Santos,L.A., Sneddon,D.J., Warren,J., Westerberg,H.,
            Wilson,R.J., Melvin,D.G., Smedley,D., Brown,S.D., Flicek,P.,
            Skarnes,W.C., Mallon,A.M. and Parkinson,H.
  TITLE     The International Mouse Phenotyping Consortium Web Portal, a
            unified point of access for knockout mice and related phenotyping
            data
  JOURNAL   Nucleic Acids Res 42 (Database issue), D802-D809 (2014)
   PUBMED   24194600
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BY330336.1, AK150696.1 and AC126038.4.
            
            On Jun 30, 2006 this sequence version replaced NM_020585.1.
            
            Transcript Variant: This variant (1) represents the longer
            transcript. Variants 1 and 2 encode the same protein.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK150696.1, AB041568.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164132, SAMN01164135
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-59                BY330336.1         3-61
            60-2004             AK150696.1         2-1946
            2005-2031           AC126038.4         82990-83016         c
FEATURES             Location/Qualifiers
     source          1..2031
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="8"
                     /map="8 11.42 cM"
     gene            1..2031
                     /gene="Golga7"
                     /gene_synonym="C130038N16Rik; GCP16; GOLGA3AP1; HSPC041"
                     /note="golgin A7"
                     /db_xref="GeneID:57437"
                     /db_xref="MGI:MGI:1931029"
     exon            1..407
                     /gene="Golga7"
                     /gene_synonym="C130038N16Rik; GCP16; GOLGA3AP1; HSPC041"
                     /inference="alignment:Splign:2.1.0"
     CDS             297..710
                     /gene="Golga7"
                     /gene_synonym="C130038N16Rik; GCP16; GOLGA3AP1; HSPC041"
                     /note="golgi autoantigen, golgin subfamily a, 7"
                     /codon_start=1
                     /product="golgin subfamily A member 7"
                     /protein_id="NP_065610.2"
                     /db_xref="CCDS:CCDS40297.1"
                     /db_xref="GeneID:57437"
                     /db_xref="MGI:MGI:1931029"
                     /translation="MRPQQAPVSGKVFIQRDYSSGTRCQFQTKFPAELENRIDRQQFE
                     ETVRTLNNLYAEAEKLGGQSYLEGCLACLTAYTIFLCMETHYEKVLKKVSKYIQEQNE
                     KIYAPQGLLLTDPIERGLRVIEITIYEDRGVSSGR"
     exon            408..560
                     /gene="Golga7"
                     /gene_synonym="C130038N16Rik; GCP16; GOLGA3AP1; HSPC041"
                     /inference="alignment:Splign:2.1.0"
     exon            561..662
                     /gene="Golga7"
                     /gene_synonym="C130038N16Rik; GCP16; GOLGA3AP1; HSPC041"
                     /inference="alignment:Splign:2.1.0"
     exon            663..725
                     /gene="Golga7"
                     /gene_synonym="C130038N16Rik; GCP16; GOLGA3AP1; HSPC041"
                     /inference="alignment:Splign:2.1.0"
     exon            726..2031
                     /gene="Golga7"
                     /gene_synonym="C130038N16Rik; GCP16; GOLGA3AP1; HSPC041"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2006..2011
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Golga7"
                     /gene_synonym="C130038N16Rik; GCP16; GOLGA3AP1; HSPC041"
                     /note="hexamer: AATAAA"
     polyA_site      2011
                     /gene="Golga7"
                     /gene_synonym="C130038N16Rik; GCP16; GOLGA3AP1; HSPC041"
                     /note="major polyA site"
ORIGIN      
        1 gcgacaggac gtaagcggcg acggaggtgg cgcgacagct gctggagggc cgaggaggcg
       61 ggtttgtgtt tccagggccg aaccaggatg tgggggggcg cgggtcctgg gcttgggtag
      121 cttggagtcc ctcggctaca gccatgagtg aaggggatcg gcgagggggg aggcctgggg
      181 cgtctttggg cggtgggtgg ctccgaaggg ctggcgggcc ggagagccgg ctctaggccg
      241 gccatctgac cccgtgtctt gcccgaactc gcagagcggc gggtcctgtc ctcgccatga
      301 ggccgcagca ggcaccggtg tccgggaagg tgttcattca gcgagactac agcagcggca
      361 cgcgctgcca gttccagacc aagttccccg cggagctgga gaacaggatt gacagacagc
      421 agtttgaaga aacagttcga actctaaata atctttatgc agaagcagag aaacttgggg
      481 gccagtcgta tcttgaaggc tgtttggctt gtttaacagc atacaccatc ttcttatgca
      541 tggaaactca ttatgagaag gtcttgaaga aagtctccaa atacattcaa gaacagaatg
      601 agaagatata tgctccccaa ggcctcctcc taacagaccc cattgagaga ggacttcgag
      661 ttattgaaat caccatctat gaagacagag gtgtgagcag tggaagataa accacagagt
      721 tacaggtcct gcctccagct gggaccttcg tctatccact ggccgatggc agagtgtccc
      781 tacctcctct ccagagcgtt attctcttgt ctctgctgcc agagccacgg tgccacacct
      841 ggagtgaccg ctcgtcactc agcatccact ttgtctccca gttgtgtagg actctgtgat
      901 cttttgattt gtttccaaga aaataaagga agcaattctc tttataaatt caaagccatt
      961 taaaacacag gcagttggcc agcccaagac agagtcgttt tcttaccaga taccagtgtc
     1021 actggttctc cttgtccctt gggtcagttt cctaggtggc tttatgatcc cacaagtcat
     1081 gtcttagctc agtccctccc ccagattagt agcaggcttt gagggtgtgt gtgcctgtgg
     1141 tccggctgac ccgccgcccg agtccccaag ctaccagcct tgacgtgctt cagatcttca
     1201 gattggtttc tgctgttcaa tttcagaggc tccttgagag aataatatat gttacttgtt
     1261 ttagtgttgc agttattatt aaggcagtat ttatgcaatt ccggttgttt ctttgaaagc
     1321 agttctgtta atgtgcatta cctcgagatg ttggggagat gttgtgtgtg ttgcttgttc
     1381 attccacaga taagtaagca caatgagcag accctcagcc atcagctcca cctgccccag
     1441 ctctgcccgg tgtggaagaa gcaagtgtcc taagcaccta actctagttt tgttacaagt
     1501 ataacttagg agaaaaaatt ggtagaaata atacagtatg ttgctaattt gtaacctact
     1561 ttaaactctg atttatagcc tcacatacag tattcagggc acagaaatct tttgattgac
     1621 tcaagtaagt tttggcttcc gtgtaacttc aagttaaagt taattttttt cagctcttct
     1681 ttatctctat actctcttag tatcggaatt tcttatgttc ttttaggaat ttgagagcac
     1741 tgtgtttggg agaagttagg aaacataagg aatgaatgaa gcagttgaac ttggagatac
     1801 tgtaggtgct aatactggat ctaatctttc agatttaatt tgttttctgg gccttgtagt
     1861 tactcagtaa accccttaga tctgtgtaat aatttaattg tataacgctc atttgttcct
     1921 ttaaagccta ttctagtctg tctgcctttt aaacttgttg caataatgtc gccaagatat
     1981 aaacacatta gtaaaacttt tcttaaataa accctctctt gtcttagtct a
//
