LOCUS       XM_006515935            4260 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus golgin A5 (Golga5), transcript variant X1,
            mRNA.
ACCESSION   XM_006515935
VERSION     XM_006515935.5
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000078.7) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_006515935.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4260
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="12"
     gene            1..4260
                     /gene="Golga5"
                     /gene_synonym="Ret-II"
                     /note="golgin A5; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 13 ESTs, 446 long SRA
                     reads, 3 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 26 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:27277"
                     /db_xref="MGI:MGI:1351475"
     CDS             1583..3772
                     /gene="Golga5"
                     /gene_synonym="Ret-II"
                     /codon_start=1
                     /product="golgin subfamily A member 5 isoform X1"
                     /protein_id="XP_006515998.1"
                     /db_xref="GeneID:27277"
                     /db_xref="MGI:MGI:1351475"
                     /translation="MSWFADLAGRAEDLLNRVDQGAATALRKENTSNIFYSKNTDYPE
                     LQQQNTDSNYQTGQKANYISSAADNIRHQKATILAGTANVKVGSRTVGDATHPTEHAS
                     APRPSSQFVRRKKSEPDDELLFDFLNSSQKEPTGRVEVKKEKGRAPVSPSSPSGVSSV
                     NTSVTTTKAMGGNAGSQSPGVNSSDSVPEVHKEPSEESTAPSATSEEHSSTPSDGSSR
                     SQELSNLRLENQLLRNEVQSLNQEMASLLQRSKETQEELNKARVRVEKWNVDNSKSDR
                     ITRELRAQVDDLTEAVAAKDSQLAVLKVRLQEADQVLSSRTEALEALRSEKSRIMQDH
                     KEGSSLQNQALQTLQERLHEADATLKREQESYKQMQSEFAARLNKMEVDRQNLAEAVT
                     LAERKYSEEKKKVDELQQQVKLHRASLESAKQELVDYKQKATRILQSKEKLINSLKEG
                     SSFEGLESSTASSMELEELRHEKEMQKEEIQKLMGQMHQLRSELQDMEAQQVSEAESA
                     REQLQDLQDQIAKQRTSKQELETELERMKQEFRYMEEDLHRTKNTLQSRIKDREEEIQ
                     KLRNQLTNKTLSNSSQSELESRLHQLTETLIQKQTMLESLSTEKNSLVFQLERLEQQV
                     HSASSGPNSGSAINMSGVDSGEGTRLRNVPVLFNDTETNLAGMYGKVRKAASSIDQFS
                     IRLGIFLRRYPIARVFVIIYMALLHLWVMIVLLTYSPEMHHDQPYGK"
ORIGIN      
        1 gcagacggaa gggggcgtgg cctggcgcta gggccccgcg gccgccggcg ccgccgcctg
       61 agtgacctgc taggcggccg gcggcgctca gcttccggcc actcaggcag ctcgttggcc
      121 actctgtttt gaggtcctcg ccgcccttcc acgtctcccg gaagagctag ccggcaggtc
      181 cgggagcagc gggctgctgt ggcggcccgg gcgggcgacg aggccgcggt gctgccgctc
      241 ggcgtcctca ggtgaggcgc gaccaggccg cgggcgggac ggcttggcct gcgggacccg
      301 gtctccgcct ttcccgagcg ctgtcgtgct cgtcttcgct cagggacaag gaaggggatg
      361 ccagagcccc gtagcctccg gataccgagg ctgacccgcc ctccaccccg actctgctct
      421 ggggacccag tacgatgtgt tctcgcctct cggggacccg tggtcacacc gccgggcctg
      481 acccctgacc cccgcctctg tgtgacatct gaccttcccg gtggctttgc accacgggaa
      541 gtcccctctt ggagtctgtc actgagataa gagctcaggt ttagtgtcta cgatccacgt
      601 gaaagatatg ttttaaagcc ccgttaactt tcagatggga ggcaagacat taattgtctt
      661 caggcttttt tttattagga gagctacttt tctctcgctc atcactaatt tttacatcga
      721 gcttgtgtaa cgttttataa gtcagaaggc atgttacatt cctttttcat ttggtttctc
      781 ataaattgaa atacacactt aaatgggttt cctaaagagt gtgttgaaac agttaacttc
      841 cgacgaggtt agagcggaga ggttaaaagg tgggtttacc tctaggttga cctagattcc
      901 agtgtctgag gtgccatcga agttccagga tctttctaag ccatatccat ctttatttgt
      961 ttctaaagga ctttacagtt tgccatataa tgtagctgag cattatgtta ctatattatt
     1021 tttattattt tatttttata ttatattatt tttagtgata gtgtttgcac aacacttgac
     1081 atataaggat gaattacttc agtagtgttt ctaggagtgc ctgtgtgtgg gctagaattg
     1141 gaatttatca ttgagcaaac caggcattgt gtgtatccac ccactccccc ttccccagca
     1201 gggagagaca tgttttaaaa caacagttgc aacaacctga agcagtgtaa ggcaaaagaa
     1261 gggcatgcac acagaataaa aagacctagc atagaaggga aggaaagaca actctgatgc
     1321 caatttagtg aagaaagccc aagatctaat agttccaagc caaagggaca ctgaccacat
     1381 tcaaccaaca ctgttgactt tgtagtttac ttcattctac agcttaaagg ttaattttac
     1441 ttcgtggcct tgactttggc acctggaagt tttttccatg tgttggttaa atagataatt
     1501 tatacagtca tttttttaaa aaaaaaattg aactcagctg gacatgcaca tggttcatca
     1561 gtaggattgc tttgctacca tcatgtcttg gtttgctgat cttgctggaa gggctgaaga
     1621 tcttttaaac cgagtggatc agggggctgc aacagctctc agaaaggaga ataccagcaa
     1681 catcttttat agcaaaaata ctgactatcc tgaacttcag cagcaaaaca cagattcaaa
     1741 ttaccagacc ggacagaaag ctaactatat ttcctcagct gctgataaca tccgacatca
     1801 gaaagccacg atcctagctg gcacagcgaa cgtgaaagtc ggatccagga cagtcgggga
     1861 tgccacccat cccaccgagc atgcgtctgc ccctaggcct tcatcccagt ttgttcggag
     1921 gaaaaaatca gagcctgatg atgagctgct atttgatttt cttaacagtt cccaaaaaga
     1981 gcccactggg agagtggaag tcaagaaaga gaagggcaga gctcctgtct ctccaagttc
     2041 tccgtcaggt gtcagttctg tcaacaccag tgtaaccacc accaaggcca tgggaggaaa
     2101 cgctgggagc caaagtcctg gagtgaacag ttcggattct gtgcctgaag ttcataagga
     2161 accctcagag gagagcacgg ccccaagtgc caccagcgag gagcacagct ctacacctag
     2221 tgacggtagc agcaggtcgc aggagctgtc caatctccga ctggagaatc agttgctcag
     2281 gaatgaagtc cagtctttaa atcaggaaat ggcctcatta ctccagagat ccaaagaaac
     2341 tcaagaagaa ttaaataagg caagagtaag agttgaaaaa tggaatgttg acaattcaaa
     2401 gagcgatcgc ataactcgag aactgcgagc gcaagtagat gacctcaccg aagcagtggc
     2461 cgcaaaggac tcccagctgg ctgtcctcaa agtgcgactg caggaggctg accaggtgct
     2521 aagttcccgc acagaagcac tagaagcctt aaggagtgaa aagtcacgaa taatgcagga
     2581 tcacaaggaa ggtagtagcc tacagaatca agctctgcaa actcttcaag agaggctgca
     2641 tgaagctgat gccactctaa agagagagca agagagctac aaacaaatgc agagtgagtt
     2701 tgctgcacgc cttaacaaaa tggaagtgga ccgtcagaac ttggcagaag cagttactct
     2761 ggcagaaaga aagtactccg aggagaagaa gaaggttgat gaactccagc agcaagtcaa
     2821 gctacacagg gcaagcttgg agtcggctaa gcaggagtta gttgactaca agcagaaagc
     2881 tacacggata ctccaatcta aagaaaaact gatcaacagc ttaaaggaag gctcaagctt
     2941 tgaaggccta gagagcagca cggctagcag catggaattg gaagaacttc ggcatgagaa
     3001 ggagatgcag aaggaggaga tccagaagct gatgggccag atgcatcagc tgaggtctga
     3061 gctacaggac atggaggctc agcaggttag tgaagctgaa tcagcaagag aacaattaca
     3121 agatctgcaa gaccagatag ctaagcagag gacatctaag caagagctgg agacggagct
     3181 ggaacgaatg aagcaggaat tccgctacat ggaggaggat ctgcatagaa caaagaacac
     3241 actgcaaagc aggattaaag atagggagga agaaattcaa aaactgagga atcagcttac
     3301 caacaaaact ttaagcaaca gcagccagtc agagctagaa agccggctcc atcagctaac
     3361 ggaaacactc atccagaaac agaccatgct ggagagcctc agcacagaaa agaactccct
     3421 ggtcttccag ctggagcgcc ttgagcagca ggtgcattct gcctcctcgg ggcccaacag
     3481 tggatctgcc attaacatgt ctggagtcga cagtggtgaa gggacacgcc tgcgaaatgt
     3541 tcctgttctt tttaatgaca ccgaaactaa tctggcagga atgtatggga aggttcgaaa
     3601 agctgctagc tccattgacc aatttagtat tcgcctggga atttttctca gaagataccc
     3661 catagcacga gtgtttgtaa tcatctacat ggctttgctg cacctctggg tcatgatcgt
     3721 actgctgact tactcaccag aaatgcacca tgaccaaccg tacggcaagt gaacagagcc
     3781 actggttccc atgagtgcct gccattgtcc agagctggga tctgcagaaa gatcagcact
     3841 aagactgcta ggaaccgtgc acaagatggt ttcttcatgg agagctttta atcttttaac
     3901 ttatttctct ggtgtctgac tctcccctat tcccataaga gtctctaaat gcagacagta
     3961 atttgacaaa ttaagctcaa ctttttctga gttcagttcc ctagatatgt atagagaaag
     4021 agaaaaggcg atttgggggt gttcacctct gtacagacct ttctatattt taggtgacac
     4081 tgattatggg ttataatcag ggaaactaat tgtatttagg gattaaaaat aaaaagattt
     4141 cttttttaat aatttagagt gctttatatt ttcatatatt taactgcaaa tatttaatgt
     4201 tttcatgtta gattcttggt ataattcttt ttgaaataca taaataaaat tcactgtgca
//
