LOCUS       XM_036157726            1315 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus predicted pseudogene 9237 (Gm9237),
            transcript variant X1, mRNA.
ACCESSION   XM_036157726
VERSION     XM_036157726.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000078.7) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1315
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="12"
     gene            1..1315
                     /gene="Gm9237"
                     /note="predicted pseudogene 9237; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 10
                     long SRA reads, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 3 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:668553"
                     /db_xref="MGI:MGI:3645302"
     CDS             180..554
                     /gene="Gm9237"
                     /codon_start=1
                     /product="hippocalcin-like protein 1 isoform X1"
                     /protein_id="XP_036013619.1"
                     /db_xref="GeneID:668553"
                     /db_xref="MGI:MGI:3645302"
                     /translation="MTSRDKLEQKLKWAFSMSDLDSNGYISCSEMLEIVQQSEDHNPP
                     SILQRTLTDAPLQAIYKMVSSMMKMPEDESMPEKRTDKIFRQMDTNKDGKMSLDEFNK
                     GAKRDPSIVRLLQCDPSSASQF"
ORIGIN      
        1 gatacaaggg tttcctaaat gactgtccca ctggccacct gactgtggac aatttcaaga
       61 tctaggccaa ctttttcccc tacagagatg cctccaaggt cgctgaacgt gtcttccaca
      121 actttgacac caacagcaac agcaccatcg acttccgagt gttcatcatt gctctgagca
      181 tgacctctcg ggacaagctg gaacagaagc tgaagtgggc cttcagcatg tctgacctag
      241 acagcaatgg ctatatcagc tgcagtgaaa tgctggagat agtgcagcag agcgaggacc
      301 ataacccacc ctccatcctc cagagaacac tcacagatgc ccctttgcag gccatctaca
      361 agatggtgtc ctccatgatg aagatgcctg aggacgagtc catgcccgag aagcgaacag
      421 acaagatctt cagacagatg gacacaaaca aagatggcaa aatgtccctg gatgaattca
      481 acaaaggtgc caagagggac ccatccattg tccggttgct gcagtgtgat cccagcagtg
      541 ctagccagtt ctgaggggaa tgggctttta cacagttgtg agaaacacag gcttgacctg
      601 ccatcttcag ctttgcttga tacagtggtt ttctccgtga tttcttctgc tctctcggga
      661 cctgggtcca ggcagcacat cacactcacc tggtctggct ggatgcagct ccctcctctg
      721 tctgatccaa tagatgtccc tccccatcca gtccagactg gttccttcca aggtttcaag
      781 tgttctgggc tgtagggctt cttccctgcc cacagagggc ctggaggccc ttaaggacac
      841 cagacaggac atttcagtat cttacggaga ccagctgact tattctatga tcccaggtga
      901 ctttgtgagg atgaagaaga tggagagtag ataggcaagc ccttcctgtg catggctcca
      961 cctcccttgt tcattttctc cgaccaaagc tgcttgcatg tatatactac agtatcctta
     1021 cttttaatat ataagttttg tataaagtga gaaggttcag tccctgtatt taaagcctct
     1081 gactgccttt aaagcatggt cccctgtggc ctgtgattcc ccccaccccc aagtctggct
     1141 gtgctgtggt atttaagtat ttatttgcct aattacacag gagatacatg catgcccaag
     1201 gctgtggaca tctgccctct gtcctgcaaa tacaggtgtt cctgtgtgct ctgtccttcc
     1261 tttccattga cctggcatat taaaatgatc aaataaacca aggtctgtga gtttc
//
