LOCUS       NM_001025353             857 bp    mRNA    linear   ROD 04-AUG-2023
DEFINITION  Mus musculus predicted gene 6040 (Gm6040), mRNA.
ACCESSION   NM_001025353 XM_001005309
VERSION     NM_001025353.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 857)
  AUTHORS   Amid C, Rehaume LM, Brown KL, Gilbert JG, Dougan G, Hancock RE and
            Harrow JL.
  TITLE     Manual annotation and analysis of the defensin gene cluster in the
            C57BL/6J mouse reference genome
  JOURNAL   BMC Genomics 10, 606 (2009)
   PUBMED   20003482
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 857)
  AUTHORS   Patil AA, Cai Y, Sang Y, Blecha F and Zhang G.
  TITLE     Cross-species analysis of the mammalian beta-defensin gene family:
            presence of syntenic gene clusters and preferential expression in
            the male reproductive tract
  JOURNAL   Physiol Genomics 23 (1), 5-17 (2005)
   PUBMED   16033865
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK136644.1.
            
            On Apr 9, 2010 this sequence version replaced NM_001025353.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK136644.1, BY721018.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849381, SAMN00849384
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-679               AK136644.1         2-680
            680-857             AK136644.1         682-859
FEATURES             Location/Qualifiers
     source          1..857
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="8"
                     /map="8 10.35 cM"
     gene            1..857
                     /gene="Gm6040"
                     /gene_synonym="Defb51; EG574083"
                     /note="predicted gene 6040"
                     /db_xref="GeneID:100503992"
                     /db_xref="MGI:MGI:3646527"
     exon            1..119
                     /gene="Gm6040"
                     /gene_synonym="Defb51; EG574083"
                     /inference="alignment:Splign:2.1.0"
     exon            120..199
                     /gene="Gm6040"
                     /gene_synonym="Defb51; EG574083"
                     /inference="alignment:Splign:2.1.0"
     CDS             145..336
                     /gene="Gm6040"
                     /gene_synonym="Defb51; EG574083"
                     /note="beta-defensin 51"
                     /codon_start=1
                     /product="beta-defensin 51 precursor"
                     /protein_id="NP_001020524.1"
                     /db_xref="CCDS:CCDS40262.1"
                     /db_xref="GeneID:100503992"
                     /db_xref="MGI:MGI:3646527"
                     /translation="MRLHGFFLALFAVFQVLHAISSALNFERPCYLRGGICLKQGTPN
                     CEPFRGPCRAFTVCCKIRS"
     exon            200..857
                     /gene="Gm6040"
                     /gene_synonym="Defb51; EG574083"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aaagaagttt gtacctctta tgtgaagtat caaggagcaa ggaagaaaat ggggaggaaa
       61 taaggcaatt tcccatgttc tactaactga gaaaaagggt gtctatggca agttgcttgg
      121 gctctgggac caacctccac aataatgaga ctccatggtt tcttcttggc tctctttgcc
      181 gtcttccagg tactgcacgc tatcagcagt gcactcaatt ttgaaagacc ttgctacctc
      241 cgaggaggta tctgcctgaa gcaggggaca ccaaactgtg agcctttcag aggaccctgc
      301 agagctttca ctgtctgctg caaaataaga agttgacacg ccagagggtc aaggaacctg
      361 gcgggtgagg gatctgagtg tggctcctgt ggtctgagtg agagcaacat gttcaagtct
      421 gaaccataca tctcactgcc gtcaccattg ctggctattg tggccagaga agaggtaggc
      481 agagtgagga agacaatggg gagaatccat gtatattata atatttacaa agatttttat
      541 ttgaaaacat tctgttttat caaacacatt ttatagatat agaaattaaa atttaaccag
      601 gttgaaaaac ttgccaaaaa aaaatcacag acaataaata gaaatgccaa gtcaaaggct
      661 cttctatttt ccaaaaacac tctgcctata tggaatgggg ctggatgcaa aagagttcac
      721 cagtgcgagg tgggctagct ggagacaagc tactatagta ggtaaagtgt tatccaaaaa
      781 gctcgctgag gaatggcatc atgacgctgg gcccgaggag gaagcctctg taagtttcta
      841 ttgctataat aaacatc
//
