LOCUS       NM_001033789            2187 bp    mRNA    linear   ROD 07-AUG-2023
DEFINITION  Mus musculus predicted gene 5820 (Gm5820), mRNA.
ACCESSION   NM_001033789 XM_988446
VERSION     NM_001033789.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2187)
  AUTHORS   Katayama S, Tomaru Y, Kasukawa T, Waki K, Nakanishi M, Nakamura M,
            Nishida H, Yap CC, Suzuki M, Kawai J, Suzuki H, Carninci P,
            Hayashizaki Y, Wells C, Frith M, Ravasi T, Pang KC, Hallinan J,
            Mattick J, Hume DA, Lipovich L, Batalov S, Engstrom PG, Mizuno Y,
            Faghihi MA, Sandelin A, Chalk AM, Mottagui-Tabar S, Liang Z,
            Lenhard B and Wahlestedt C.
  CONSRTM   RIKEN Genome Exploration Research Group; Genome Science Group
            (Genome Network Project Core Group); FANTOM Consortium
  TITLE     Antisense transcription in the mammalian transcriptome
  JOURNAL   Science 309 (5740), 1564-1566 (2005)
   PUBMED   16141073
REFERENCE   2  (bases 1 to 2187)
  AUTHORS   Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD,
            Collins FS, Wagner L, Shenmen CM, Schuler GD, Altschul SF, Zeeberg
            B, Buetow KH, Schaefer CF, Bhat NK, Hopkins RF, Jordan H, Moore T,
            Max SI, Wang J, Hsieh F, Diatchenko L, Marusina K, Farmer AA, Rubin
            GM, Hong L, Stapleton M, Soares MB, Bonaldo MF, Casavant TL,
            Scheetz TE, Brownstein MJ, Usdin TB, Toshiyuki S, Carninci P,
            Prange C, Raha SS, Loquellano NA, Peters GJ, Abramson RD, Mullahy
            SJ, Bosak SA, McEwan PJ, McKernan KJ, Malek JA, Gunaratne PH,
            Richards S, Worley KC, Hale S, Garcia AM, Gay LJ, Hulyk SW,
            Villalon DK, Muzny DM, Sodergren EJ, Lu X, Gibbs RA, Fahey J,
            Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M,
            Madan A, Young AC, Shevchenko Y, Bouffard GG, Blakesley RW,
            Touchman JW, Green ED, Dickson MC, Rodriguez AC, Grimwood J,
            Schmutz J, Myers RM, Butterfield YS, Krzywinski MI, Skalska U,
            Smailus DE, Schnerch A, Schein JE, Jones SJ and Marra MA.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK145364.1 and AC110730.10.
            
            On Feb 20, 2010 this sequence version replaced NM_001033789.1.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK145364.1, BC147564.1 [ECO:0000332]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on computational evidence
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-4                 AK145364.1         1-4
            5-459               AK145364.1         6-460
            460-2187            AC110730.10        75253-76980
FEATURES             Location/Qualifiers
     source          1..2187
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="18"
                     /map="18 20.87 cM"
     gene            1..2187
                     /gene="Gm5820"
                     /gene_synonym="EG545253"
                     /note="predicted gene 5820"
                     /db_xref="GeneID:545253"
                     /db_xref="MGI:MGI:3646292"
     exon            1..115
                     /gene="Gm5820"
                     /gene_synonym="EG545253"
                     /inference="alignment:Splign:2.1.0"
     exon            116..196
                     /gene="Gm5820"
                     /gene_synonym="EG545253"
                     /inference="alignment:Splign:2.1.0"
     CDS             148..501
                     /gene="Gm5820"
                     /gene_synonym="EG545253"
                     /codon_start=1
                     /product="uncharacterized protein LOC545253"
                     /protein_id="NP_001028961.1"
                     /db_xref="GeneID:545253"
                     /db_xref="MGI:MGI:3646292"
                     /translation="MNTATFIYSSNRLVPGELLAAQGIRWQERHMTESELTGGLERPN
                     LSCWLGRPPLHHPHSGMWSEAAPRLLALEGKDACQHTGSYFSHFCGQRKSPTWHYCTE
                     SKDYWNKDVIIQICS"
     exon            197..287
                     /gene="Gm5820"
                     /gene_synonym="EG545253"
                     /inference="alignment:Splign:2.1.0"
     exon            288..459
                     /gene="Gm5820"
                     /gene_synonym="EG545253"
                     /inference="alignment:Splign:2.1.0"
     exon            460..2187
                     /gene="Gm5820"
                     /gene_synonym="EG545253"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agaagcgagc cagtaatgaa catccctcca tggcctctgc atcagctcct gctttctggc
       61 ctgcttgagt tccagtcctg acatcctttg ggtgatgaac agcaatgtgg aaaataagct
      121 aagcctgaat tttacagctc gactggaatg aatacagcaa cctttattta ttcaagcaac
      181 agactagttc ctggagagtt actggcagca caaggcatca gatggcaaga gagacacatg
      241 acagagtcag agctgactgg cggcttggaa agacccaacc tgagttgttg gctgggaaga
      301 ccacctctac accatcctca ctcaggtatg tggtccgaag cagctccaag gctgcttgcc
      361 ttggagggga aagatgcttg ccaacacact ggaagttact tttcacattt ctgtggacaa
      421 agaaagtcac ctacgtggca ctactgtaca gaaagcaagg attactggaa caaagatgta
      481 attattcaaa tatgctcttg atctcccatg gcatggtctc tatcatcaca aaaggatcat
      541 tcttagtggc tttataagaa tggaaactat ggtatcatta tcatatagaa cactctatca
      601 aagatcttga tttgcagaga ctccgggttc gctgtaaagt tgaacagacc ggctcacttc
      661 agcaacacaa aggattcact ataaggctgt gggttactta tggatcccta gggaaagctg
      721 gggtgaggga aagagagaga atgaaacaaa acaaaacaat aaacctagat ttcagaaggc
      781 acggggcaga aatgaagaga ctctcaaatt taatttcctg tgagtgagag aatctgattg
      841 gctaaactgg acgcaacaga gccttttgat tgacagtcct acacctgagg tgtggccccc
      901 agtaggatga gagagtggga agaatctcca gagagcttct gggtcagtga gctaatgcag
      961 gggccactga ggtctgaata aaagtgcttt gtcccagtgc cagttggtgg cagaaatgaa
     1021 atctctttgt cttttctgca tggctttcct tgttgcaaat tggatctagg gttgtttatg
     1081 ttgggcaaac actctacctc tgaactacat ctctagccca gaaacaaaac cttctgttac
     1141 agccacatgg gagacttaaa aacaatttta tttccagctt gccaaagcaa tggttcagag
     1201 atctgtaaga ttaggattat ctatgacagt tgttaaacta agaaagttac tccccaagag
     1261 tcatggaata tctaacaaaa agtcccagtg ccaggcatgc aaaatcctat ttccaatggt
     1321 tggtcatagg ggtccaagag acacccttcc ccccccccca aataggctat gtctcttgtc
     1381 tctgtttgct ttccagaagt tgaaggtaaa tccctattgt tgaagatgcc atgcacttca
     1441 ggcacagcac tcaagagacc aagctatatg taaccttgaa gaccagcttt catattacct
     1501 gcaggaacta tacaagctgc caaggaaggg aagccattaa tagtcctacc tagctatggc
     1561 accaacgaac cacaacaata accagcatgg catgataacc ctaagggcgc agtagtggca
     1621 cacatatcct ggtggtaacc aacagctctc taattggact taagaactgc tcaaagggcc
     1681 aggggagatt atgcatggta ctgagaactt agccaactac tcactcgggg ctagtaagat
     1741 catggttgct gaaggagaaa ctacaactgc tactttacta aaccaacatg attcctgact
     1801 gcattctaaa tatttaattc ttatactcac ccctcataca aagaaacttc tctttgcaac
     1861 agatcaagac cattaaagaa aactacaact gctaaaaatg cagagaacaa ttgattaagg
     1921 agtaaccagt cccagttgat gtttttaaca atacaacaaa atgctcaaga aacatcatag
     1981 caaaggggag gggagagtct ttgtagttta gggcactagg aaaggaagag ctgagaaaac
     2041 aggctgagca agtcagaaag agcaagcagg gaagcagcac tccttggtgg tctctgctct
     2101 agtccctgcc tccagtttcc tcacctgact tccctcagag atggaggatg accagagagt
     2161 tttaaaatga aataaaccct ttccttc
//
