LOCUS       NM_178418               2506 bp    mRNA    linear   ROD 05-AUG-2023
DEFINITION  Mus musculus coiled-coil domain containing 144B (Ccdc144b), mRNA.
ACCESSION   NM_178418
VERSION     NM_178418.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2506)
  AUTHORS   Katayama S, Tomaru Y, Kasukawa T, Waki K, Nakanishi M, Nakamura M,
            Nishida H, Yap CC, Suzuki M, Kawai J, Suzuki H, Carninci P,
            Hayashizaki Y, Wells C, Frith M, Ravasi T, Pang KC, Hallinan J,
            Mattick J, Hume DA, Lipovich L, Batalov S, Engstrom PG, Mizuno Y,
            Faghihi MA, Sandelin A, Chalk AM, Mottagui-Tabar S, Liang Z,
            Lenhard B and Wahlestedt C.
  CONSRTM   RIKEN Genome Exploration Research Group; Genome Science Group
            (Genome Network Project Core Group); FANTOM Consortium
  TITLE     Antisense transcription in the mammalian transcriptome
  JOURNAL   Science 309 (5740), 1564-1566 (2005)
   PUBMED   16141073
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC050811.1,
            AC158934.4 and AC116677.11.
            
            [WARNING] On Sep 26, 2023 this sequence was replaced by
            NM_178418.5.
            
            On Mar 21, 2009 this sequence version replaced NM_178418.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC050811.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            NMD candidate          :: translation inferred from conservation
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1590              BC050811.1         3-1592
            1591-1591           AC158934.4         155927-155927
            1592-1921           BC050811.1         1594-1923
            1922-1923           AC116677.11        211078-211079       c
            1924-2506           BC050811.1         1924-2506
FEATURES             Location/Qualifiers
     source          1..2506
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="3"
                     /map="3 17.41 cM"
     gene            1..2506
                     /gene="Ccdc144b"
                     /note="coiled-coil domain containing 144B"
                     /db_xref="GeneID:241943"
                     /db_xref="MGI:MGI:2681852"
     exon            1..114
                     /gene="Ccdc144b"
                     /inference="alignment:Splign:2.1.0"
     exon            115..258
                     /gene="Ccdc144b"
                     /inference="alignment:Splign:2.1.0"
     CDS             138..1700
                     /gene="Ccdc144b"
                     /codon_start=1
                     /product="coiled-coil domain containing 144B"
                     /protein_id="NP_848505.2"
                     /db_xref="CCDS:CCDS38415.1"
                     /db_xref="GeneID:241943"
                     /db_xref="MGI:MGI:2681852"
                     /translation="MEDVGDLTQSSETASEYGRPPCPNYEAILRLIERLSLECKDSGS
                     LLKIQNAIHSYKRLIQLKTGHCKVLLEKLQTVENEVNGLRKKLADAAREQLQQGQELC
                     NVRFTLKQEEEKRKNVVWVYDKMKEQLREKEDQYNKEVKMKQKLEIRVRELDMDLKTV
                     RHNLNTVLEERNCIERQLFQEQNTRIIQDEILANHLHKQKELKMAQEKISSQLQEAPD
                     QHTQCTEKMRDCIQKLGLENHKLKETARKQAEKIEQLKKNLLSGVLSDDLTEKLESAS
                     AKYLHLYEQNQLLRRELLSMRTIQRKCEKLKKHKKKLEQEVVSLRSHMKRNMIECGQI
                     EQYKWEIEEKTKQELVGKLKQVNLFLQTQAAYEDKLEKLRQKQNASVRTQMELRIKDL
                     ESEFSKMKSQVDCNQIEMENYKQLYLAEVKIRKSLSNKLSKTDERLAEVKTKLLLERK
                     QYRASQYSMVDTRPALEPTCPRDSNKFFIPRSFSGEIMLPKSDLWHSIETMENCKTKA
                     SDQLCICLSSLH"
     exon            259..451
                     /gene="Ccdc144b"
                     /inference="alignment:Splign:2.1.0"
     exon            452..635
                     /gene="Ccdc144b"
                     /inference="alignment:Splign:2.1.0"
     exon            636..773
                     /gene="Ccdc144b"
                     /inference="alignment:Splign:2.1.0"
     exon            774..835
                     /gene="Ccdc144b"
                     /inference="alignment:Splign:2.1.0"
     exon            836..929
                     /gene="Ccdc144b"
                     /inference="alignment:Splign:2.1.0"
     exon            930..1220
                     /gene="Ccdc144b"
                     /inference="alignment:Splign:2.1.0"
     exon            1221..1435
                     /gene="Ccdc144b"
                     /inference="alignment:Splign:2.1.0"
     exon            1436..1658
                     /gene="Ccdc144b"
                     /inference="alignment:Splign:2.1.0"
     exon            1659..1761
                     /gene="Ccdc144b"
                     /inference="alignment:Splign:2.1.0"
     exon            1762..2478
                     /gene="Ccdc144b"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agaggtctct gcgcctagcc ataattccca caaggccacc acgggacggt tgagcctcct
       61 gaaaagagaa catggctaaa gaccactgtg gtctcttgta ttttcggtga agaggagaaa
      121 cagaaagcct gcctgctatg gaagatgttg gtgacttaac tcagtcatcg gagacagcct
      181 cagagtatgg caggcctccc tgccctaatt atgaagctat actgaggctc attgaacgtc
      241 tcagcctgga atgcaaagat tctggtagcc tattaaaaat ccagaatgca attcattcat
      301 ataaaaggtt aatacaactg aaaactggtc actgcaaagt acttctagag aaacttcaaa
      361 cagtggagaa tgaagtcaac ggactccgta agaagcttgc agacgcagca cgtgaacaac
      421 tccaacaagg acaagaactc tgcaatgtaa ggtttacttt aaaacaagaa gaagagaaga
      481 gaaaaaatgt cgtctgggtt tatgacaaaa tgaaggagca gctgagagaa aaagaagatc
      541 aatataacaa agaagttaaa atgaaacaaa aacttgaaat tcgtgttagg gaactggata
      601 tggacctgaa gactgtgaga cataatctta acacagtttt agaggaaaga aactgcatcg
      661 agagacaact ttttcaagaa cagaacacca gaatcataca ggatgagatt ctggcaaatc
      721 accttcacaa acaaaaggag ctaaaaatgg cacaagaaaa aattagctct cagttacagg
      781 aagcaccgga ccaacacacc cagtgcacgg agaagatgcg ggactgcata caaaagcttg
      841 gacttgaaaa tcacaagtta aaagagacag caagaaagca agcagagaaa attgaacagt
      901 taaagaaaaa tctactaagt ggagttttga gtgatgatct tactgaaaaa ttggaatctg
      961 catctgccaa atatctacat ctctatgaac aaaatcagct gcttcggcgg gagttactgt
     1021 ctatgagaac aatacaaagg aaatgtgaaa aactaaagaa gcataaaaag aagttagaac
     1081 aagaagtagt tagccttaga agtcacatga aaaggaatat gatagagtgt ggccaaatag
     1141 aacagtataa atgggaaatc gaagagaaga caaagcagga attggtggga aagttaaaac
     1201 aagtcaacct attcttgcag acacaagcag cgtatgaaga caagctagag aagttaagac
     1261 agaaacagaa cgcttcagtg cgaactcaga tggagctcag aataaaggac ctggagtctg
     1321 aattctctaa gatgaaaagt caagttgatt gtaatcaaat agaaatggaa aactataagc
     1381 agctctacct agcggaagtg aaaattagaa aatcattgtc aaataaatta agcaaaacag
     1441 atgaaagact ggcagaggtc aaaaccaaac ttctcctgga gagaaaacag taccgagctt
     1501 cccaatacag catggtggac acaaggcctg ccctggagcc cacttgtcct agagacagta
     1561 ataaattttt cattccaaga agtttctcag gcgaaatcat gcttcctaag tcagacctct
     1621 ggcactcaat tgagaccatg gaaaattgca agaccaaggc ttctgaccag ttgtgcatct
     1681 gtctctcatc tctccattga ctgctgtcca ctgcagaaag aagcttctct gatggatgct
     1741 gagacgagcc caggtccaca gttcctgatg aatctgaatc tggactccgt agaacttctc
     1801 ctctagagtt tactcatcta tgaagctaga gtcttcctag acaacctatc agaacatgta
     1861 gagattttaa tataaatgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg
     1921 tgtaatttga aatataaaat ttactttaat atgttacttg gctattcata aaattttttg
     1981 attattttcc aatatatagg ttaaacatta aagaatattt ttgtatcaga gattatgaaa
     2041 gaaagatgaa attttaagac ctgtaagaca tataaagtac tcagaaattg ctggttgttt
     2101 gtgagcctag aggctgcctg gggctgagaa caaagaaaaa caaacccggg tatgccctgt
     2161 agttaaagca ttcctgagaa cagcttgacc ataaagataa agaggaatgt gaggacataa
     2221 cagggctatc tgaactgagt cagcattgat aaacatccaa ctcacagaac tctgacaccc
     2281 tgatctgcac gtacatgtaa tttttctgct gatgtttgaa taagccaata gtgtgtctct
     2341 atgctgaatt ccccacccct aagcccttta acccataaaa acctctagct tttgagcctt
     2401 gtcgtcaaat ccactgtctc ctgcgataca ttttgacaag gagctccgcc attaaactac
     2461 ctcgtgtgtt tacagcaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa
//
