LOCUS       NM_029805               2451 bp    mRNA    linear   ROD 19-SEP-2023
DEFINITION  Mus musculus predicted gene, 57848 (Gm57848), mRNA.
ACCESSION   NM_029805
VERSION     NM_029805.2
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2451)
  AUTHORS   Thompson CL, Ng L, Menon V, Martinez S, Lee CK, Glattfelder K,
            Sunkin SM, Henry A, Lau C, Dang C, Garcia-Lopez R, Martinez-Ferre
            A, Pombero A, Rubenstein JLR, Wakeman WB, Hohmann J, Dee N, Sodt
            AJ, Young R, Smith K, Nguyen TN, Kidney J, Kuan L, Jeromin A,
            Kaykas A, Miller J, Page D, Orta G, Bernard A, Riley Z, Smith S,
            Wohnoutka P, Hawrylycz MJ, Puelles L and Jones AR.
  TITLE     A high-resolution spatiotemporal atlas of gene expression of the
            developing mouse brain
  JOURNAL   Neuron 83 (2), 309-323 (2014)
   PUBMED   24952961
REFERENCE   2  (bases 1 to 2451)
  AUTHORS   Canterini S, Carletti V, Nusca S, Mangia F and Fiorenza MT.
  TITLE     Multiple TSC22D4 iso-/phospho-glycoforms display idiosyncratic
            subcellular localizations and interacting protein partners
  JOURNAL   FEBS J 280 (5), 1320-1329 (2013)
   PUBMED   23305244
REFERENCE   3  (bases 1 to 2451)
  AUTHORS   Jones A, Friedrich K, Rohm M, Schafer M, Algire C, Kulozik P,
            Seibert O, Muller-Decker K, Sijmonsma T, Strzoda D, Sticht C, Gretz
            N, Dallinga-Thie GM, Leuchs B, Kogl M, Stremmel W, Diaz MB and
            Herzig S.
  TITLE     TSC22D4 is a molecular output of hepatic wasting metabolism
  JOURNAL   EMBO Mol Med 5 (2), 294-308 (2013)
   PUBMED   23307490
  REMARK    Erratum:[EMBO Mol Med. 2013 Jun;5(6):965]
REFERENCE   4  (bases 1 to 2451)
  AUTHORS   Wiese CB, Ireland S, Fleming NL, Yu J, Valerius MT, Georgas K, Chiu
            HS, Brennan J, Armstrong J, Little MH, McMahon AP and
            Southard-Smith EM.
  TITLE     A genome-wide screen to identify transcription factors expressed in
            pelvic Ganglia of the lower urinary tract
  JOURNAL   Front Neurosci 6, 130 (2012)
   PUBMED   22988430
  REMARK    Publication Status: Online-Only
REFERENCE   5  (bases 1 to 2451)
  AUTHORS   Canterini S, Bosco A, Carletti V, Fuso A, Curci A, Mangia F and
            Fiorenza MT.
  TITLE     Subcellular TSC22D4 localization in cerebellum granule neurons of
            the mouse depends on development and differentiation
  JOURNAL   Cerebellum 11 (1), 28-40 (2012)
   PUBMED   20878296
REFERENCE   6  (bases 1 to 2451)
  AUTHORS   Lu Y, Kitaura J, Oki T, Komeno Y, Ozaki K, Kiyono M, Kumagai H,
            Nakajima H, Nosaka T, Aburatani H and Kitamura T.
  TITLE     Identification of TSC-22 as a potential tumor suppressor that is
            upregulated by Flt3-D835V but not Flt3-ITD
  JOURNAL   Leukemia 21 (11), 2246-2257 (2007)
   PUBMED   17690703
REFERENCE   7  (bases 1 to 2451)
  AUTHORS   Fiol DF, Mak SK and Kultz D.
  TITLE     Specific TSC22 domain transcripts are hypertonically induced and
            alternatively spliced to protect mouse kidney cells during osmotic
            stress
  JOURNAL   FEBS J 274 (1), 109-124 (2007)
   PUBMED   17147695
REFERENCE   8  (bases 1 to 2451)
  AUTHORS   Canterini S, Mangia F and Fiorenza MT.
  TITLE     Thg-1 pit gene expression in granule cells of the developing mouse
            brain and in their synaptic targets, mature Purkinje, and mitral
            cells
  JOURNAL   Dev Dyn 234 (3), 689-697 (2005)
   PUBMED   15895388
REFERENCE   9  (bases 1 to 2451)
  AUTHORS   Stryke D, Kawamoto M, Huang CC, Johns SJ, King LA, Harper CA, Meng
            EC, Lee RE, Yee A, L'Italien L, Chuang PT, Young SG, Skarnes WC,
            Babbitt PC and Ferrin TE.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
REFERENCE   10 (bases 1 to 2451)
  AUTHORS   Fiorenza MT, Mukhopadhyay M and Westphal H.
  TITLE     Expression screening for Lhx3 downstream genes identifies Thg-1pit
            as a novel mouse gene involved in pituitary development
  JOURNAL   Gene 278 (1-2), 125-130 (2001)
   PUBMED   11707329
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC125063.4.
            
            On Aug 6, 2021 this sequence version replaced NM_029805.1.
            
            Summary: This gene represents naturally occurring readthrough
            transcription between Spacdr (GeneID:78829) and LOC122152370 genes
            on chromosome 5. The readthrough transcript encodes a fusion
            protein that shares sequence identity with each individual gene
            product. [provided by RefSeq, Mar 2023].
            
            ##RefSeq-Attributes-START##
            readthrough transcript :: includes exons from GeneID 78829,
                                      122152370
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-403               AC125063.4         139594-139996       c
            404-1415            AC125063.4         138149-139160       c
            1416-1576           AC125063.4         134640-134800       c
            1577-1625           AC125063.4         127276-127324       c
            1626-1958           AC125063.4         123300-123632       c
            1959-2451           AC125063.4         117555-118047       c
FEATURES             Location/Qualifiers
     source          1..2451
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="5"
                     /map="5"
     gene            1..2451
                     /gene="Gm57848"
                     /note="predicted gene, 57848"
                     /db_xref="GeneID:122152371"
                     /db_xref="MGI:MGI:7512643"
     exon            1..403
                     /gene="Gm57848"
                     /inference="alignment:Splign:2.1.0"
     exon            404..1415
                     /gene="Gm57848"
                     /inference="alignment:Splign:2.1.0"
     CDS             672..2201
                     /gene="Gm57848"
                     /note="Spacdr-LOC122152370 readthrough"
                     /codon_start=1
                     /product="uncharacterized protein LOC122152371"
                     /protein_id="NP_084081.1"
                     /db_xref="CCDS:CCDS57393.1"
                     /db_xref="GeneID:122152371"
                     /db_xref="MGI:MGI:7512643"
                     /translation="MSGGKKKSSFQITSVTTDYEGPGSPGASDSPVPPALAGPPPRLP
                     NGDPNPDPGGRGTPRNGSPPPGAPASRFRVVKLPQGLGEPYRRGRWTCVDVYERDLEP
                     PSFGRLLEGIRGASGGTGGRSLDSRLELASLGISTPIPQPGLSQGPTSWLRPPPTSPG
                     PQARSFTGGLGQLAGPGKAKVETPPLSASPPQQRPPGPGTGDSAQTLPSLRVEVESGG
                     SAAATPPLSRRRDGAVRLRMELVAPAETGKVPPTDSRPNSPALYFDASLVHKSPDPFG
                     AAAAQSLSLARSMLAISGHLDSDDDSGSGSLVGIDNKIEQAMVPFWKHLGKPGTSEQH
                     EKRPLTGPEKASMDSDTVKLVKPHKEAMVADLDAGPGMLEPCVLPSAKERSPVRDQES
                     RSNRDSRDSRSLMTLVHSVSMFMFSMLQSGWRLCRWKSSMSAGSVSSHTRTRSALGTS
                     EAEMLREVYLVLWVIRKQLRELARRQERRRRRRMWSHPSHTSRHSEPVQGLKHDARSP
                     L"
     exon            1416..1576
                     /gene="Gm57848"
                     /inference="alignment:Splign:2.1.0"
     exon            1577..1625
                     /gene="Gm57848"
                     /inference="alignment:Splign:2.1.0"
     exon            1626..1958
                     /gene="Gm57848"
                     /inference="alignment:Splign:2.1.0"
     exon            1959..2451
                     /gene="Gm57848"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agaccgagac ggagcggagc tgaggagctg agagatacat ccagtggggc cacgtgggag
       61 gagccttgag agagagccac tcaagggact ggagccagcg gggggctgag ccgccccctc
      121 ccacagcaac agggaagacc cgtggagtgt taaccgaggc tgcgcctggg ctcccccgtg
      181 gaagcgctgg tttcttctcg tctcaactgc aaactttcca ccgagatgcc tcgcagagtg
      241 agatgcggac gccagagaac actgggtagc ccttgattgc tgcctgccgt ggcctgctct
      301 aggccgcctt aggatttaaa aaaaaaagag agagagagag agagagagat cttagtcccc
      361 caggtcttct ctccagctca gctcggtggc cgaggcccga gagtttgcaa gctcagcttt
      421 ggggtttcag cggcgacagc agcaggaaaa acctgcccct gcccccccct cctgccacct
      481 cccctctgta ctccagtcac taaccaggca cccccaagtt cccacaaggc cctcctgcca
      541 tgtcggaccc agacgtcccc aggggccccg atgtccctgc catgtggccc ccttgttcca
      601 gaggtgcctg agcccctctc caggagccca gcccctcccc cacccgagcc cagtccggag
      661 ccccagggac catgagtggt ggtaagaaga aaagtagttt tcagatcacc agcgtcacca
      721 cggactatga gggcccagga agcccagggg cttcggattc ccctgtccca ccggctctcg
      781 ctgggccccc gccccgcctc cccaatgggg accccaaccc tgatccaggg ggcaggggca
      841 ccccccggaa tggctctccg ccacctggag cccctgcctc ccgtttccgg gtggtgaagc
      901 tgccccaagg tttgggagag ccttatcgtc gaggtcggtg gacgtgtgtg gatgtttacg
      961 agagagatct ggagcctcca agcttcggtc ggcttctgga gggcattcga ggggcctctg
     1021 gaggcaccgg aggcagatca ttggattcta ggttggagct ggctagtttg ggcataagca
     1081 cccctatccc gcagccaggc ctgtctcagg gccccacctc ttggctccgc ccgcccccta
     1141 cttctcctgg accacaggcc cgctccttca caggggggct gggccagctg gcaggacctg
     1201 gcaaggctaa ggtggagaca cccccgctgt cagcatctcc accccagcag cgccccccag
     1261 ggcctgggac tggagatagt gctcagaccc tgccctctct gagggtagaa gtggagtctg
     1321 ggggttcagc agccgcaacc cctccactgt cacggagaag agatggagca gttcggctga
     1381 ggatggagtt agttgctcca gcggagacag gaaaggtacc tcccaccgac tctcgcccca
     1441 actccccagc cctctacttc gatgccagcc tggtccataa gtctccagac ccatttggag
     1501 ccgcagcagc ccagagcctc agcctggccc gttccatgtt ggctatcagc ggtcacctgg
     1561 acagcgatga cgatagtggt tccggaagcc tggttggcat tgacaacaag attgaacaag
     1621 ccatggtccc gttctggaaa cacctaggca agccaggcac gtccgagcag cacgagaagc
     1681 gtccattgac aggaccggag aaggcttcca tggactctga cactgtaaag ttggtcaagc
     1741 cccacaaaga ggccatggtc gccgacctgg atgcgggccc agggatgctc gaaccctgtg
     1801 tgctgccctc agccaaggaa agatctcctg tgcgtgatca agagagccgt tcgaatcgtg
     1861 acagccgtga cagccgttct ctgatgaccc tagttcactc agtctctatg ttcatgttct
     1921 ccatgctaca gtccggctgg cgactatgta ggtggaagtc ttctatgagt gctggctcag
     1981 tttcctccca cacgaggacc aggtcggcat tggggacgtc agaggctgag atgctgcggg
     2041 aagtgtacct ggtgctctgg gtcatccgca aacaactaag agagctggcc cgcaggcagg
     2101 agaggcgaag acggcgccgt atgtggtctc atccctccca tacttcccgt cactctgaac
     2161 cagtgcaggg cctcaaacat gatgcccgaa gtcctcttta ggcaggggag ccccagatcc
     2221 tttgaaagcc cccacctcac tcttacggaa gattgacagg aagggttcaa tggccatcag
     2281 gccagagcta ctggtgagga gacattcgac catactgcca catctcactg gagccccaag
     2341 accaggcctg gggtcgaaca cactcccctt ctctgtgttt attcaatttg taaaaaaaaa
     2401 aaaaaaaaaa aaaattaata ttgagaaata aataccggat atttctgagt a
//
