LOCUS       XM_036155319            1277 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus predicted gene, 57795 (Gm57795), mRNA.
ACCESSION   XM_036155319
VERSION     XM_036155319.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000067.7) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 36% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1277
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="1"
     gene            1..1277
                     /gene="Gm57795"
                     /note="predicted gene, 57795; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     mRNAs, 1 long SRA read, and 64% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:118567658"
                     /db_xref="MGI:MGI:7512541"
     CDS             1..1275
                     /gene="Gm57795"
                     /codon_start=1
                     /product="collagen alpha-2(I) chain-like"
                     /protein_id="XP_036011212.1"
                     /db_xref="GeneID:118567658"
                     /db_xref="MGI:MGI:7512541"
                     /translation="MAPDLMLNTCSMGPTAVAHLGQPLMQLYLYLASSRTVTGHLPSF
                     TALQLPQTPQRPACVLAVSAASQKGNRQAPAWCPRMSPPVPTSPPPKLRKGTKLVFNL
                     GLQEGARHLVANDRSTSTRDGVAAGPWSIGHAPRALVGMAKELRWTRGSASAAGCSWS
                     VTERGVHTPPFRQGWEAHGPGAGRGAADTGLAKQPLWGPAPSSRGSRASTGSSGAPGA
                     WARRGGIASGENAEAGEELGAVTAALLAAEMAVAAAPAASAAQRDRTPPAAAGARGSP
                     GNRGRGRGRGPRRLGSRLEDPGWEPFCSASQQVARRLSSVPSLKGSESWVCPKEGRMA
                     QRWEPSAERGERGDAGVESEWRGPGSLKRSLQMARSCHSRPLGAESVKPQRDRPDLIL
                     TSAPPAPIILVPVPSNHSSRAPPANPADFSRT"
ORIGIN      
        1 atggctcctg acctcatgct caacacctgt tcaatgggtc ccacagctgt ggcccaccta
       61 ggtcagccac ttatgcagct gtacttgtac ttggccagtt caaggacggt tactggccac
      121 ctcccatcct tcacggcatt acagcttcct cagactcccc agcgccctgc ttgtgtcctg
      181 gctgtgagtg cggccagcca gaaaggcaat cggcaagccc cagcttggtg ccctcgaatg
      241 tctccacctg ttccaacatc gccaccacct aagctcagaa agggcaccaa gctggtgttc
      301 aacctgggcc tccaggaagg ggcgcgccac ttggtggcca atgacagatc cacgagtacc
      361 agggatgggg tggctgccgg gccctggagc ataggacacg ccccgagagc cttggttggc
      421 atggccaaag aactgagatg gacacggggc tcagcatcgg ccgcagggtg ctcttggtcg
      481 gtcaccgaac gcggagtgca cacgcccccg ttccgacagg gctgggaggc gcacggtccc
      541 ggagcaggca ggggcgcggc ggacaccggg ctagccaagc agccgctttg gggcccagca
      601 cccagcagca ggggcagcag ggccagcacg ggcagcagcg gggcaccggg cgcctgggcg
      661 cggcggggag gcatagcgag cggagagaac gcagaagctg gagaggagct gggcgcggtg
      721 acggcggcgc tgctagcggc ggagatggcg gtggcagcgg cgccagcggc tagtgctgct
      781 cagcgggacc ggacgcctcc tgcagctgcg ggagcccgtg gttccccggg caaccgcggg
      841 cggggccggg ggcggggccc acggaggctg ggctcccggc tggaggaccc gggatgggaa
      901 cccttctgct ccgcgtctca gcaagttgca agaaggctgt cttcggtccc cagccttaag
      961 gggtcagagt cgtgggtgtg tccaaaggaa ggcaggatgg cacagaggtg ggagccgtcg
     1021 gctgagagag gagagagagg tgatgctggg gtagaaagtg aatggagagg ccccggcagc
     1081 ctgaagagat cgcttcagat ggctcgcagc tgccactcgc gacctcttgg cgcagaatct
     1141 gtgaaaccgc agcgggaccg gcctgacctt attctcacga gtgctccacc cgctcctata
     1201 atacttgtcc ctgtccccag caatcacagc tctcgcgcgc caccagcgaa cccagcggac
     1261 ttctcaagga cctgacc
//
