LOCUS       NM_001382392             998 bp    mRNA    linear   ROD 01-NOV-2024
DEFINITION  Mus musculus predicted pseudogene 5645 (Gm5645), mRNA.
ACCESSION   NM_001382392 XM_017318668
VERSION     NM_001382392.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BX005465.14.
            
            On May 6, 2020 this sequence version replaced XM_017318668.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR5189685.184990.1,
                                           SRR5189676.148137.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-92                BX005465.14        129088-129179       c
            93-203              BX005465.14        127672-127782       c
            204-998             BX005465.14        124565-125359       c
FEATURES             Location/Qualifiers
     source          1..998
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="X"
                     /map="X 72.38 cM"
     gene            1..998
                     /gene="Gm5645"
                     /gene_synonym="EG434874"
                     /note="predicted pseudogene 5645"
                     /db_xref="GeneID:434874"
                     /db_xref="MGI:MGI:3643221"
     exon            1..92
                     /gene="Gm5645"
                     /gene_synonym="EG434874"
                     /inference="alignment:Splign:2.1.0"
     exon            93..203
                     /gene="Gm5645"
                     /gene_synonym="EG434874"
                     /inference="alignment:Splign:2.1.0"
     CDS             175..876
                     /gene="Gm5645"
                     /gene_synonym="EG434874"
                     /codon_start=1
                     /product="uncharacterized protein LOC434874"
                     /protein_id="NP_001369321.1"
                     /db_xref="GeneID:434874"
                     /db_xref="MGI:MGI:3643221"
                     /translation="MDQLIVDTRRFINEKDCIYKLSGLLSSLSAFMLEVLIASILSWR
                     LWEFDSNAVQFVSFGLFEAYYPQQFNISGTLTKMLVYTPIDSTWNISTEFMYAQNLIV
                     LAILMKPVVLVFCVIAIKISCTKNPLVEMQIYCYKISALILSVSSMFAFVSVIWNHMV
                     DFYGHTTLDFPSDFPVKKEALTSKHLTVVLPVGLLIATMSLFGVIMFLSEISDLKLKR
                     PVKANDASKMGLLDA"
     exon            204..998
                     /gene="Gm5645"
                     /gene_synonym="EG434874"
                     /inference="alignment:Splign:2.1.0"
     regulatory      971..976
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Gm5645"
                     /gene_synonym="EG434874"
                     /note="hexamer: AATAAA"
     polyA_site      998
                     /gene="Gm5645"
                     /gene_synonym="EG434874"
                     /note="major polyA site"
ORIGIN      
        1 acttttggta gtcttggaaa cataaaaatt tataatgtga gtctctaaca ctgggcagtc
       61 actaacagtt gcacttcaat gaaatgataa aggtgattca cctcctttgg gacttcattt
      121 ctattcaaca tttcctgtga attcaaagat atttatgatc acagaatctt tcaaatggat
      181 caactcatcg ttgatacacg gagatttatc aatgagaagg actgcatcta caagctgagc
      241 ggcctcctta gcagcttatc agctttcatg cttgaagtac tcattgcaag catcttatcc
      301 tggcgcctat gggaatttga cagcaatgct gtgcagtttg tgtcctttgg cctgtttgaa
      361 gcatattacc ctcagcagtt taacatctct ggaacactaa ccaagatgct ggtatacacc
      421 cctattgatt caacttggaa catttcaact gaatttatgt atgcacagaa cctgatagta
      481 ttggccattt tgatgaagcc tgtggttctg gttttctgtg taatagccat taaaatcagc
      541 tgcacgaaga acccactagt ggagatgcag atatattgct acaagatctc tgccttaatt
      601 ttgtctgtta gcagcatgtt cgcatttgtt tctgtgatct ggaaccacat ggtagatttt
      661 tatggccaca ccactcttga ctttccatct gattttcctg ttaagaaaga agctttaaca
      721 agcaaacatt taactgtggt gttaccagta ggcctcctta tagccaccat gtcactcttt
      781 ggtgtgatca tgtttctctc tgagataagc gatttgaaac taaagcgtcc tgtgaaggcc
      841 aatgatgctt ccaaaatggg ccttctagat gcgtgaagtg ataagttttg gatttccaac
      901 atttgtgaga atgttcttta agaagtttcc tcttcctaca ggaaactcat gtagttctca
      961 acacattcta aataaatttg ttctatacca agcatcaa
//
