LOCUS       NM_001033782            3033 bp    mRNA    linear   ROD 08-OCT-2024
DEFINITION  Mus musculus predicted gene 5592 (Gm5592), mRNA.
ACCESSION   NM_001033782 XM_485918 XM_914039
VERSION     NM_001033782.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3033)
  AUTHORS   Katayama,S., Tomaru,Y., Kasukawa,T., Waki,K., Nakanishi,M.,
            Nakamura,M., Nishida,H., Yap,C.C., Suzuki,M., Kawai,J., Suzuki,H.,
            Carninci,P., Hayashizaki,Y., Wells,C., Frith,M., Ravasi,T.,
            Pang,K.C., Hallinan,J., Mattick,J., Hume,D.A., Lipovich,L.,
            Batalov,S., Engstrom,P.G., Mizuno,Y., Faghihi,M.A., Sandelin,A.,
            Chalk,A.M., Mottagui-Tabar,S., Liang,Z., Lenhard,B. and
            Wahlestedt,C.
  CONSRTM   RIKEN Genome Exploration Research Group; Genome Science Group
            (Genome Network Project Core Group); FANTOM Consortium
  TITLE     Antisense transcription in the mammalian transcriptome
  JOURNAL   Science 309 (5740), 1564-1566 (2005)
   PUBMED   16141073
REFERENCE   2  (bases 1 to 3033)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     PREDICTED REFSEQ: This record has not been reviewed and the
            function is unknown. The reference sequence was derived from
            AC137152.2.
            
            On Jun 22, 2007 this sequence version replaced NM_001033782.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK133295.1, BC147594.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-152               AC137152.2         110496-110647       c
            153-914             AC137152.2         108130-108891       c
            915-3033            AC137152.2         104791-106909       c
FEATURES             Location/Qualifiers
     source          1..3033
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 28.21 cM"
     gene            1..3033
                     /gene="Gm5592"
                     /gene_synonym="EG434172"
                     /note="predicted gene 5592"
                     /db_xref="GeneID:434172"
                     /db_xref="MGI:MGI:3648691"
     exon            1..152
                     /gene="Gm5592"
                     /gene_synonym="EG434172"
                     /inference="alignment:Splign:2.1.0"
     CDS             146..2719
                     /gene="Gm5592"
                     /gene_synonym="EG434172"
                     /codon_start=1
                     /product="uncharacterized protein C2orf78 homolog"
                     /protein_id="NP_001028954.1"
                     /db_xref="CCDS:CCDS52209.1"
                     /db_xref="GeneID:434172"
                     /db_xref="MGI:MGI:3648691"
                     /translation="MSENSQSSPFFGTESTLHPSLPLLSNSIQPAGTVCNFSRVSTPD
                     VSSAWLLPSASSTSLQPLMGNAYLNPHAGTTMLTVLTEQGQISTSTPSYPGALKWDCT
                     GSTHGREDALQEFNMKLIDQDTTLSSLAVTNQSDKILDPNVIVPFHPTLSSSFVQITP
                     SQMPNQGYSLAPSYQEGSQVYYYEHNNLGPLIAGEFGQCLKAHGSVSYPGSQTSVLQP
                     EMVMVLKEIQPRNIQMPLFTSAFSYSTSAQSMPDNGLPVVQMETSLGLPPSGQTHCQL
                     QSPELCNTCVQVSQIRPPAVNGDKALTAPIHSPSEFLALPPAPSLEQPENKTMPEIKE
                     GTKENQDRPVLTLEHPDLQQPLHCTDTESLRQKPDSDNAHLGCICMGPKELVGLENEN
                     GSSFNFKDITRLEADIQLPQLLNTLTDIDQDQSCETWTVTSGPSDQVRKNKHKSFELL
                     EGAPQAKFQHWDLVEGEGAGGVAGASERAIDNMAKQPEGKAPKGPPSKNRKARKQEQE
                     RPSGPQNKSKKTEELKQSRNTAKAEENLSIPKTKRKRNPPELSQNSFKKPRTNLAMHM
                     LESVQVFHPLGKKTEKKTGISSFRGLRTFTINKDPGPGSGTVTTTVLNMPCEGQFPPK
                     SPGKVQRAESSIDKDCLSPSQYELPPAGKVKLVPLPFPTLDKPQSRPASRKPLSLALR
                     RTTTVQPHSHSAQPTTLRPAQPPPVSSSLIASAKPAPPISSSSTGPNVTNPNQSSAVP
                     HLVTSRPVPYRASSHTSFQRELVSAARNKVPSPPKPQTKYLLHDFSRQPIPWKKVDIL
                     GPVVSQPITKEQRPEREAMKRQAQQERENAVKNPSTGKLQIFLQRERDMEISQYYGYA
                     M"
     exon            153..914
                     /gene="Gm5592"
                     /gene_synonym="EG434172"
                     /inference="alignment:Splign:2.1.0"
     exon            915..3033
                     /gene="Gm5592"
                     /gene_synonym="EG434172"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 acaggtaccc tgtgaccagt gagctctctt tgatactgga cacactcgct gatttggtca
       61 gcatatcaga caaagactac catttatccg gctcaattgt agggtggagt actgttactc
      121 cccatacaga gccccccccc caaacatgtc agaaaattcc caaagttcac ctttctttgg
      181 gacagaaagc actctgcacc cttctctccc tctgctgagc aactccatac agcctgcagg
      241 aacggtatgc aacttttcca gggtctccac cccagatgtg agttcagcat ggcttctacc
      301 atcagcatcc agcacttctc tccagccact catgggtaat gcctatctta acccacatgc
      361 tggcacaacc atgctgacag tgctaacgga gcagggccag atttccacct cgacaccctc
      421 ctatccaggt gctctcaagt gggattgcac tggaagcact catggaaggg aagatgcact
      481 ccaggaattc aatatgaaac tcattgacca ggacactaca ctctcctccc tggctgtgac
      541 aaaccagagt gataaaattt tagatcccaa tgtcatagtt ccttttcatc caacactgtc
      601 ttccagcttt gtccaaatca caccatcgca gatgccaaat caaggataca gcctggcacc
      661 ttcctaccag gaaggcagcc aggtctatta ctatgagcac aacaacctgg gccctctgat
      721 agctggagaa tttgggcagt gtttgaaggc ccatggctct gtgtcctacc ctgggagtca
      781 gacctctgtg ctccaaccag agatggtgat ggtgctaaag gagattcagc caaggaatat
      841 ccaaatgcca ctttttacct ctgccttctc ctattccaca tctgctcagt ccatgccaga
      901 caacggtctt cccgtggttc aaatggagac atccctggga ttgccacctt caggccagac
      961 acactgtcag ctgcagagtc cagaactctg caacacctgt gtccaggttt cccaaataag
     1021 gccaccagct gtcaatgggg acaaggcatt aacagccccc atccacagtc cttcagagtt
     1081 cctggccttg cctccagctc caagcctgga acaaccagag aacaaaacca tgcctgagat
     1141 aaaagagggc acaaaagaaa accaagacag gccagtcctg actttggagc accctgactt
     1201 gcagcagcct ctgcactgca ctgacactga gagcctcagg cagaagcctg attctgataa
     1261 tgcccatttg ggatgcatct gcatgggtcc gaaagagctt gtggggctag agaatgagaa
     1321 tggatccagc ttcaacttta aagacatcac tagacttgag gcagacatcc aacttcccca
     1381 actcctaaac accctcacag acatagacca agatcagtcc tgtgaaacct ggacagtcac
     1441 cagtggcccc tctgaccagg tgaggaagaa caaacataaa tcctttgagt tgcttgaggg
     1501 ggctcctcag gccaaattcc agcactggga cctggtggag ggagaagggg ctgggggtgt
     1561 tgctggagcc agtgagaggg ctattgacaa catggcaaag caaccagagg gcaaagctcc
     1621 caaagggcct cccagcaaga acagaaaagc tagaaaacag gagcaagaaa gaccaagtgg
     1681 gccacagaac aaatccaaga aaacagagga gcttaagcag tcaaggaaca cagccaaagc
     1741 agaagagaac ctctccatcc ccaagaccaa gaggaagagg aacccacctg agctcagtca
     1801 aaacagcttc aagaagcctc gaaccaacct tgcaatgcac atgctggagt ccgtgcaggt
     1861 cttccaccca cttgggaaga agactgagaa gaaaactggc atctcctcct tcagaggtct
     1921 gcgaaccttc accatcaaca aagatccagg cccaggctca ggcacagtta ctacaacagt
     1981 gttaaacatg ccatgtgagg gccagtttcc tcccaaaagc ccagggaagg ttcagagagc
     2041 agagagcagt attgacaaag attgtctatc tccatcccag tatgagctgc ccccagctgg
     2101 taaggtcaag ttagttcctc tgccttttcc aactctggac aagcctcaat ccagacctgc
     2161 ttctagaaag cccctttccc tggctttacg caggaccact actgtgcagc ctcactctca
     2221 ctcagctcaa cctaccacac tcaggccagc ccaaccacct cctgtgagct catctttgat
     2281 agcctctgcc aagccagctc ctccaatttc ctccagttcc actggaccta atgtaaccaa
     2341 ccccaaccag tctagtgctg tgccccattt ggtcacctcg aggcctgtac cctacagagc
     2401 atcctctcac acttcattcc agagagagct tgtttctgct gccaggaaca aggtaccatc
     2461 acctcccaaa cctcaaacca aatatctgct gcatgacttc agccgccaac ccattccatg
     2521 gaagaaagtc gacattctgg gaccagttgt ctcacaaccc atcacaaaag agcagaggcc
     2581 agagagggag gccatgaaga ggcaagccca acaagagcgt gagaatgctg tcaagaaccc
     2641 ctctactggg aaactgcaga ttttccttca gagggagagg gatatggaaa tttctcaata
     2701 ttatggctat gcaatgtaac agcttgccag atcattgcaa caaagtgctt tccaacattt
     2761 acttgaagag atatagtcac tgatacagat gtataaaagt aaagaaaaat ataaatatgt
     2821 atatacacaa gtacatgtgc aggaatatag aagactaagt atatagatag aaaaaaacat
     2881 acccacatga attttagtat taaaattgcc atataatgtt aagttggcta gtttattctg
     2941 tttctcttaa ctgtgatgaa tttatttttg ttatattcta tccgaacata tcttaagaaa
     3001 gttatttaac attaaatcaa tggagaaaat tct
//
