LOCUS       NM_001013810            3441 bp    mRNA    linear   ROD 04-AUG-2023
DEFINITION  Mus musculus predicted gene 5591 (Gm5591), mRNA.
ACCESSION   NM_001013810 XM_485917 XM_892713 XM_915431
VERSION     NM_001013810.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3441)
  AUTHORS   Katayama S, Tomaru Y, Kasukawa T, Waki K, Nakanishi M, Nakamura M,
            Nishida H, Yap CC, Suzuki M, Kawai J, Suzuki H, Carninci P,
            Hayashizaki Y, Wells C, Frith M, Ravasi T, Pang KC, Hallinan J,
            Mattick J, Hume DA, Lipovich L, Batalov S, Engstrom PG, Mizuno Y,
            Faghihi MA, Sandelin A, Chalk AM, Mottagui-Tabar S, Liang Z,
            Lenhard B and Wahlestedt C.
  CONSRTM   RIKEN Genome Exploration Research Group; Genome Science Group
            (Genome Network Project Core Group); FANTOM Consortium
  TITLE     Antisense transcription in the mammalian transcriptome
  JOURNAL   Science 309 (5740), 1564-1566 (2005)
   PUBMED   16141073
REFERENCE   2  (bases 1 to 3441)
  AUTHORS   Carninci P, Kasukawa T, Katayama S, Gough J, Frith MC, Maeda N,
            Oyama R, Ravasi T, Lenhard B, Wells C, Kodzius R, Shimokawa K,
            Bajic VB, Brenner SE, Batalov S, Forrest AR, Zavolan M, Davis MJ,
            Wilming LG, Aidinis V, Allen JE, Ambesi-Impiombato A, Apweiler R,
            Aturaliya RN, Bailey TL, Bansal M, Baxter L, Beisel KW, Bersano T,
            Bono H, Chalk AM, Chiu KP, Choudhary V, Christoffels A, Clutterbuck
            DR, Crowe ML, Dalla E, Dalrymple BP, de Bono B, Della Gatta G, di
            Bernardo D, Down T, Engstrom P, Fagiolini M, Faulkner G, Fletcher
            CF, Fukushima T, Furuno M, Futaki S, Gariboldi M, Georgii-Hemming
            P, Gingeras TR, Gojobori T, Green RE, Gustincich S, Harbers M,
            Hayashi Y, Hensch TK, Hirokawa N, Hill D, Huminiecki L, Iacono M,
            Ikeo K, Iwama A, Ishikawa T, Jakt M, Kanapin A, Katoh M, Kawasawa
            Y, Kelso J, Kitamura H, Kitano H, Kollias G, Krishnan SP, Kruger A,
            Kummerfeld SK, Kurochkin IV, Lareau LF, Lazarevic D, Lipovich L,
            Liu J, Liuni S, McWilliam S, Madan Babu M, Madera M, Marchionni L,
            Matsuda H, Matsuzawa S, Miki H, Mignone F, Miyake S, Morris K,
            Mottagui-Tabar S, Mulder N, Nakano N, Nakauchi H, Ng P, Nilsson R,
            Nishiguchi S, Nishikawa S, Nori F, Ohara O, Okazaki Y, Orlando V,
            Pang KC, Pavan WJ, Pavesi G, Pesole G, Petrovsky N, Piazza S, Reed
            J, Reid JF, Ring BZ, Ringwald M, Rost B, Ruan Y, Salzberg SL,
            Sandelin A, Schneider C, Schonbach C, Sekiguchi K, Semple CA, Seno
            S, Sessa L, Sheng Y, Shibata Y, Shimada H, Shimada K, Silva D,
            Sinclair B, Sperling S, Stupka E, Sugiura K, Sultana R, Takenaka Y,
            Taki K, Tammoja K, Tan SL, Tang S, Taylor MS, Tegner J, Teichmann
            SA, Ueda HR, van Nimwegen E, Verardo R, Wei CL, Yagi K, Yamanishi
            H, Zabarovsky E, Zhu S, Zimmer A, Hide W, Bult C, Grimmond SM,
            Teasdale RD, Liu ET, Brusic V, Quackenbush J, Wahlestedt C, Mattick
            JS, Hume DA, Kai C, Sasaki D, Tomaru Y, Fukuda S, Kanamori-Katayama
            M, Suzuki M, Aoki J, Arakawa T, Iida J, Imamura K, Itoh M, Kato T,
            Kawaji H, Kawagashira N, Kawashima T, Kojima M, Kondo S, Konno H,
            Nakano K, Ninomiya N, Nishio T, Okada M, Plessy C, Shibata K,
            Shiraki T, Suzuki S, Tagami M, Waki K, Watahiki A, Okamura-Oho Y,
            Suzuki H, Kawai J and Hayashizaki Y.
  CONSRTM   FANTOM Consortium; RIKEN Genome Exploration Research Group and
            Genome Science Group (Genome Network Project Core Group)
  TITLE     The transcriptional landscape of the mammalian genome
  JOURNAL   Science 309 (5740), 1559-1563 (2005)
   PUBMED   16141072
  REMARK    Erratum:[Science. 2006 Mar 24;311(5768):1713]
REFERENCE   3  (bases 1 to 3441)
  AUTHORS   Okazaki Y, Furuno M, Kasukawa T, Adachi J, Bono H, Kondo S, Nikaido
            I, Osato N, Saito R, Suzuki H, Yamanaka I, Kiyosawa H, Yagi K,
            Tomaru Y, Hasegawa Y, Nogami A, Schonbach C, Gojobori T, Baldarelli
            R, Hill DP, Bult C, Hume DA, Quackenbush J, Schriml LM, Kanapin A,
            Matsuda H, Batalov S, Beisel KW, Blake JA, Bradt D, Brusic V,
            Chothia C, Corbani LE, Cousins S, Dalla E, Dragani TA, Fletcher CF,
            Forrest A, Frazer KS, Gaasterland T, Gariboldi M, Gissi C, Godzik
            A, Gough J, Grimmond S, Gustincich S, Hirokawa N, Jackson IJ,
            Jarvis ED, Kanai A, Kawaji H, Kawasawa Y, Kedzierski RM, King BL,
            Konagaya A, Kurochkin IV, Lee Y, Lenhard B, Lyons PA, Maglott DR,
            Maltais L, Marchionni L, McKenzie L, Miki H, Nagashima T, Numata K,
            Okido T, Pavan WJ, Pertea G, Pesole G, Petrovsky N, Pillai R,
            Pontius JU, Qi D, Ramachandran S, Ravasi T, Reed JC, Reed DJ, Reid
            J, Ring BZ, Ringwald M, Sandelin A, Schneider C, Semple CA, Setou
            M, Shimada K, Sultana R, Takenaka Y, Taylor MS, Teasdale RD, Tomita
            M, Verardo R, Wagner L, Wahlestedt C, Wang Y, Watanabe Y, Wells C,
            Wilming LG, Wynshaw-Boris A, Yanagisawa M, Yang I, Yang L, Yuan Z,
            Zavolan M, Zhu Y, Zimmer A, Carninci P, Hayatsu N,
            Hirozane-Kishikawa T, Konno H, Nakamura M, Sakazume N, Sato K,
            Shiraki T, Waki K, Kawai J, Aizawa K, Arakawa T, Fukuda S, Hara A,
            Hashizume W, Imotani K, Ishii Y, Itoh M, Kagawa I, Miyazaki A,
            Sakai K, Sasaki D, Shibata K, Shinagawa A, Yasunishi A, Yoshino M,
            Waterston R, Lander ES, Rogers J, Birney E and Hayashizaki Y.
  CONSRTM   FANTOM Consortium; RIKEN Genome Exploration Research Group Phase I
            & II Team
  TITLE     Analysis of the mouse transcriptome based on functional annotation
            of 60,770 full-length cDNAs
  JOURNAL   Nature 420 (6915), 563-573 (2002)
   PUBMED   12466851
REFERENCE   4  (bases 1 to 3441)
  AUTHORS   Kawai J, Shinagawa A, Shibata K, Yoshino M, Itoh M, Ishii Y,
            Arakawa T, Hara A, Fukunishi Y, Konno H, Adachi J, Fukuda S, Aizawa
            K, Izawa M, Nishi K, Kiyosawa H, Kondo S, Yamanaka I, Saito T,
            Okazaki Y, Gojobori T, Bono H, Kasukawa T, Saito R, Kadota K,
            Matsuda H, Ashburner M, Batalov S, Casavant T, Fleischmann W,
            Gaasterland T, Gissi C, King B, Kochiwa H, Kuehl P, Lewis S, Matsuo
            Y, Nikaido I, Pesole G, Quackenbush J, Schriml LM, Staubli F,
            Suzuki R, Tomita M, Wagner L, Washio T, Sakai K, Okido T, Furuno M,
            Aono H, Baldarelli R, Barsh G, Blake J, Boffelli D, Bojunga N,
            Carninci P, de Bonaldo MF, Brownstein MJ, Bult C, Fletcher C,
            Fujita M, Gariboldi M, Gustincich S, Hill D, Hofmann M, Hume DA,
            Kamiya M, Lee NH, Lyons P, Marchionni L, Mashima J, Mazzarelli J,
            Mombaerts P, Nordone P, Ring B, Ringwald M, Rodriguez I, Sakamoto
            N, Sasaki H, Sato K, Schonbach C, Seya T, Shibata Y, Storch KF,
            Suzuki H, Toyo-oka K, Wang KH, Weitz C, Whittaker C, Wilming L,
            Wynshaw-Boris A, Yoshida K, Hasegawa Y, Kawaji H, Kohtsuki S and
            Hayashizaki Y.
  CONSRTM   RIKEN Genome Exploration Research Group Phase II Team and the
            FANTOM Consortium
  TITLE     Functional annotation of a full-length mouse cDNA collection
  JOURNAL   Nature 409 (6821), 685-690 (2001)
   PUBMED   11217851
REFERENCE   5  (bases 1 to 3441)
  AUTHORS   Shibata K, Itoh M, Aizawa K, Nagaoka S, Sasaki N, Carninci P, Konno
            H, Akiyama J, Nishi K, Kitsunai T, Tashiro H, Itoh M, Sumi N, Ishii
            Y, Nakamura S, Hazama M, Nishine T, Harada A, Yamamoto R, Matsumoto
            H, Sakaguchi S, Ikegami T, Kashiwagi K, Fujiwake S, Inoue K and
            Togawa Y.
  TITLE     RIKEN integrated sequence analysis (RISA) system--384-format
            sequencing pipeline with 384 multicapillary sequencer
  JOURNAL   Genome Res 10 (11), 1757-1771 (2000)
   PUBMED   11076861
REFERENCE   6  (bases 1 to 3441)
  AUTHORS   Carninci P, Shibata Y, Hayatsu N, Sugahara Y, Shibata K, Itoh M,
            Konno H, Okazaki Y, Muramatsu M and Hayashizaki Y.
  TITLE     Normalization and subtraction of cap-trapper-selected cDNAs to
            prepare full-length cDNA libraries for rapid discovery of new genes
  JOURNAL   Genome Res 10 (10), 1617-1630 (2000)
   PUBMED   11042159
REFERENCE   7  (bases 1 to 3441)
  AUTHORS   Carninci P and Hayashizaki Y.
  TITLE     High-efficiency full-length cDNA cloning
  JOURNAL   Methods Enzymol 303, 19-44 (1999)
   PUBMED   10349636
COMMENT     PREDICTED REFSEQ: This record has not been reviewed and the
            function is unknown. The reference sequence was derived from
            AK029937.1.
            
            On Apr 5, 2007 this sequence version replaced NM_001013810.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK029937.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-3441              AK029937.1         2-3442
FEATURES             Location/Qualifiers
     source          1..3441
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 25.36 cM"
     gene            1..3441
                     /gene="Gm5591"
                     /gene_synonym="EG434171"
                     /note="predicted gene 5591"
                     /db_xref="GeneID:434171"
                     /db_xref="MGI:MGI:3648692"
     exon            1..139
                     /gene="Gm5591"
                     /gene_synonym="EG434171"
                     /inference="alignment:Splign:2.1.0"
     CDS             133..2700
                     /gene="Gm5591"
                     /gene_synonym="EG434171"
                     /codon_start=1
                     /product="uncharacterized protein LOC434171"
                     /protein_id="NP_001013832.1"
                     /db_xref="CCDS:CCDS52205.1"
                     /db_xref="GeneID:434171"
                     /db_xref="MGI:MGI:3648692"
                     /translation="MSENFQSSPFFGTESALQPSLPVMNNSTHSGRVCNTSSVSTPAV
                     SLAWILPPSTNTSVQVITGRAYLNPHAGKTMLVELTEQSQNSTSALFYPGVLKWELAE
                     SKDRGDAIQEFNMTITNQDTGLSSLSVTSQCDKILDPNTIAPFHPSLLTSFVQVTPPQ
                     VPDQGYSLAPSYQDGSQVYYYNHNCLDRLIPGELGQCLQSYSSVSYPVSKGSAPQPEM
                     LMVGKEIQPRNVQIPISTSGFSYSTSGQNMPDISLQVVHMETSQGLLPSGQTVSLLHS
                     PELCNISTEVFQMRKTPVNGDRLLTAPVYSSSKFMTLPLAPILEERENENMLEMKAEL
                     SMPRDAYEGTKENQGPSHLPLLHPDCTDTRSLRPKSASDNATMEGISVGLEEQEKLEN
                     ETGSRNNFDDITTLGTGDHLPQFFKTLKDIDWGPPLQSWRVMSSSSEKVTENDLKTSD
                     LLDGAPQAKIQHQDLVRVEGSGGCAKDKERAIDNISKHLEGKAPKEAPSRHRRGRKQG
                     QERPSGPENNSKKTQELKQSRDRVKAEEKPTIPKTKRKTNPPELSQNSFKKPRTHLGM
                     HMLESVQVFHPLGKKIEKKTGISSFGGLRTSTNNKDRGPGPATPALLDMPPEGRGPDR
                     IPGKAQRVKISAHKECTSPSQYELPLPGKVKLVPLPFPTLDQPQARPASRKPLPLASH
                     RPTAAYPVRLHPHSAHPSQPAPVSTSLMASANSAPPISPSATQPNAANTSQSSAMPQL
                     AHMRLVPYRASSHTSFQRELISSGRKKAPSLPKPQTQHRLQDFSCQSIPWRKVDILGP
                     VISQPITKEQRPEREAMKSCAQQERENAAKCSSPGKLQIFLHRETDMETSLYYGYAM"
     exon            140..895
                     /gene="Gm5591"
                     /gene_synonym="EG434171"
                     /inference="alignment:Splign:2.1.0"
     exon            896..3441
                     /gene="Gm5591"
                     /gene_synonym="EG434171"
                     /inference="alignment:Splign:2.1.0"
     regulatory      3426..3431
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Gm5591"
                     /gene_synonym="EG434171"
                     /note="putative"
     polyA_site      3441
                     /gene="Gm5591"
                     /gene_synonym="EG434171"
                     /note="putative"
ORIGIN      
        1 aacctgtgac cagtgaccag tgagctgtct ggtactgaac acactctctg gtttgttcag
       61 cagatcagag aaagacaaac atttttcctg attcgttcgt gtgtgaatta ctgttactct
      121 ctctcataca tcatgtcaga aaacttccaa agttcacctt tctttgggac agaaagtgct
      181 cttcagccct ctctgcctgt gatgaacaac tctacacact caggaagggt gtgcaacacc
      241 tccagtgttt ccaccccagc tgtgagttta gcatggatcc taccaccaag caccaacact
      301 tctgtccagg tgatcacagg cagagcctac cttaacccac atgctggcaa gaccatgctg
      361 gtggagctta ctgaacagag ccagaactca acctctgcac tcttctatcc aggtgttctc
      421 aagtgggaac tcgcagaaag caaagatagg ggagatgcaa tccaggaatt caatatgacc
      481 atcactaacc aagacactgg actctcctcc ctgtctgtga catcccagtg tgataaaatt
      541 ttagatccca ataccatagc ccctttccat ccatcacttt taaccagttt tgtccaagtt
      601 acaccaccac aggtaccaga tcaaggatac agcctggcac cttcctacca ggatggcagc
      661 caggtgtact actacaacca caattgcctg gaccgtctga tacccggaga actaggacag
      721 tgtttgcagt cctacagctc tgtgtcctac cctgtgagca aggggtctgc ccctcaacca
      781 gagatgctga tggtgggaaa ggagattcag ccaaggaatg tccaaatacc aatctccacc
      841 tctggcttct cctattccac atctggtcaa aatatgccag acatcagtct tcaggtggtg
      901 cacatggaga catcccaagg attgctaccc tcgggccaga cagtcagtct gttgcacagt
      961 ccagaactct gcaatatttc caccgaggtt ttccagatga ggaaaacacc tgtcaatggg
     1021 gacaggttat taacagcccc cgtgtacagt tcttcaaaat tcatgacctt gcctctagct
     1081 ccaatcctgg aagaaagaga gaatgaaaac atgcttgaga tgaaagctga gctgtcaatg
     1141 cctcgggatg cctatgaggg cactaaagaa aaccaaggac catcacacct tcctttactg
     1201 caccctgact gcactgatac aagaagtcta agaccgaaat ctgcttctga caatgccacc
     1261 atggaaggca ttagtgtagg tctggaagag caagagaagc tggagaatga gactggatcc
     1321 agaaacaact ttgacgacat cactacactg ggaacaggtg atcaccttcc tcagttcttc
     1381 aaaaccctca aagacataga ctggggccct ccccttcaga gctggagagt catgagcagc
     1441 tcctctgaaa aggtgacaga gaatgaccta aaaacctctg acctgctcga tggagctcct
     1501 caggctaaaa tccagcacca agacctggtc agggtagagg gcagtggggg ctgtgcaaag
     1561 gacaaggaaa gagctattga caacatctca aagcatctgg agggcaaagc tcccaaagag
     1621 gcacccagca ggcacagaag aggtagaaaa caggggcaag aaagaccaag tgggccagag
     1681 aacaactcca agaaaacaca ggagcttaag cagtcaaggg acagagtcaa agcagaagag
     1741 aagcccacca tccccaagac caagaggaag acgaacccac ctgagctcag tcaaaacagc
     1801 ttcaagaagc ctcgaaccca ccttggcatg cacatgctgg agtccgtgca ggtcttccac
     1861 ccactcggga agaagattga gaagaaaact ggcatctctt ccttcggggg tctgagaacc
     1921 tccaccaaca acaaagatcg aggcccaggc ccagccaccc cagcactgct agatatgcca
     1981 cctgagggcc ggggtcctga cagaatccca ggtaaagctc agagagtgaa gatcagtgct
     2041 cacaaggagt gtacatctcc atcccagtac gagctgcccc tgcctgggaa ggtcaagtta
     2101 gtacctttgc ctttcccaac actggaccag cctcaagcca gacctgcttc tagaaagcct
     2161 ctccccctgg cttcacacag gcccactgca gcttaccctg tgaggcttca tccccactca
     2221 gctcatccat cccaaccagc tcctgtcagc acatctctga tggcctctgc caattcagct
     2281 cctccaattt cccccagtgc tacacaacct aatgcagcca acaccagtca gtctagtgct
     2341 atgcctcagt tggcccacat gaggcttgta ccctacagag catcctctca cacttcattc
     2401 cagagagagc ttatttcttc tggcaggaag aaggcaccat cactacccaa acctcaaacc
     2461 caacatcgac tgcaagactt cagctgccaa tcaattccat ggaggaaagt cgacattctg
     2521 ggaccagtca tctcacagcc catcacaaaa gagcagaggc cagagaggga ggccatgaag
     2581 agttgtgctc aacaggagcg tgagaatgct gccaagtgta gctctcctgg gaaactacag
     2641 attttccttc acagggaaac tgatatggaa acttctcttt attatggcta tgcaatgtag
     2701 gagctggcca gatctttgta acatagtact tgtgatgtgt ataatgacag gtacacagat
     2761 acagatatat acattgaact tcaagggtca tataagtgtg tagatgcata agtaaatatg
     2821 tagctatgta gatgaatatg tagatatttg tgcttatata aatgaacaga caaattttct
     2881 ataataattg taaatatttg aagtcagtaa aactaactgg agtaatttaa gtcagttctt
     2941 taatccatag tttatacagg gctttgttat ttaagtcagt tctttaatcc atacatatac
     3001 agaggccttt gttatttaag tcatttcttt aatccataca tatacagagg cctttgttat
     3061 ttaagtcatt tctttaatcc atagcatata cagaggcctt tgttatttat gtcagttctt
     3121 taatccatag catatacaga ggcctttggt atttttgtca gttctttaat ccatagtata
     3181 tacagaggcc tttgttattt atgtcagttc tttaatccat agcatataca gaggcctttg
     3241 ttatttattt ctttaatcca tagcatatac agaggccttt gttatttatg tcagttcttt
     3301 aatccatata tgagaggtct ttcttattgc tctcataact ttaatattgc taattttgat
     3361 cgacaaaata gtatatgtta cataactaca tcatattata taaactctag taatatatat
     3421 ttactattaa atcaattcat c
//
