LOCUS       XM_036152444            1292 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus predicted pseudogene 5576 (Gm5576), mRNA.
ACCESSION   XM_036152444
VERSION     XM_036152444.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000072.7) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1292
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="6"
     gene            1..1292
                     /gene="Gm5576"
                     /note="predicted pseudogene 5576; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1 long
                     SRA read, 51 Proteins, and 98% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:434050"
                     /db_xref="MGI:MGI:3644832"
     CDS             1..1236
                     /gene="Gm5576"
                     /codon_start=1
                     /product="eukaryotic initiation factor 4A-III-like"
                     /protein_id="XP_036008337.1"
                     /db_xref="GeneID:434050"
                     /db_xref="MGI:MGI:3644832"
                     /translation="MAATATMARSGSARKRLLKEEDMTKVEFETSEEVDRTPTFDTMG
                     LREDLLRGIYAYGFEKPSAIQQRAIKQIMKGRDVIAQSQSGTGKTATFSISMLQCLDI
                     QVRETQALILAPTRELAVQIQKGLLTLGDYMNVQCHACIGGTNVDEDIRKLDYGQHVV
                     AGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLIS
                     ATLPHEILEMTNKFMTDPICILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLT
                     ITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGNMPQKERESIMKEFRSGASRVLIST
                     DIWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDI
                     EQYYSTQIDEMPMNVADLI"
ORIGIN      
        1 atggcggcca cggccacgat ggcgaggtct ggctcggcgc ggaagcggct gctcaaagaa
       61 gaggacatga ccaaagtgga gttcgagacg agcgaggagg tggacaggac ccccacgttc
      121 gacaccatgg gcctgcgaga ggacctgctg cgcggcatct acgcctacgg ttttgaaaaa
      181 ccttcagcga tccagcagcg tgctatcaag cagataatga aaggcagaga tgtcattgca
      241 cagtctcagt ctggcacagg caagacggcc accttcagta tctcaatgct gcagtgcttg
      301 gatatccagg ttcgagaaac ccaagctttg atcctggctc caaccagaga gttagcggta
      361 cagattcaga agggtctgct cactctgggg gattacatga acgtgcagtg ccatgcctgc
      421 atcgggggca ccaatgtcga cgaggacatc cggaagctgg actacgggca gcatgtggtg
      481 gcaggcactc cgggacgcgt ctttgatatg atccgccgga gaagtttacg gacacgggct
      541 atcaagatgc tggttttgga tgaggctgat gaaatgttga acaaaggttt caaggagcag
      601 atctacgatg tgtacaggta tttgccacca gccacacagg tcgttctcat cagtgccaca
      661 ctgcctcatg agatcctgga gatgaccaac aagttcatga ccgaccccat ctgcatcctg
      721 gtgaagcgtg atgagttgac tctggaaggc atcaaacagt tctttgtggc cgtggaaaga
      781 gaggaatgga agtttgatac tctatgtgat ctctacgaca cgctgaccat cacccaggcc
      841 gtcatcttct gcaacaccaa gaggaaggtt gactggctca cagagaaaat gagagaagcc
      901 aatttcactg tgtcatccat gcatggaaac atgccccaga aagaacgaga gtctatcatg
      961 aaggagttcc ggtcaggtgc cagccgggtg ctcatctcca cagacatctg ggctcggggc
     1021 ctggatgtcc ctcaggtgtc cctcatcatt aactatgacc tgcccaacaa cagagaactg
     1081 tacattcaca gaattgggag atcgggtcgg tatggacgaa aaggtgtggc catcaatttt
     1141 gtgaagaatg atgacatccg gattctcagg gacatcgagc agtactactc cacccagata
     1201 gacgagatgc ccatgaacgt ggctgacctc atctgaagct ggtgctggtg caccgaggcc
     1261 ctgtttggaa acagaagctt ctatttaatg gg
//
