LOCUS       XM_036159663             552 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus predicted pseudogene 5471 (Gm5471), mRNA.
ACCESSION   XM_036159663
VERSION     XM_036159663.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000081.7) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..552
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="15"
     gene            1..552
                     /gene="Gm5471"
                     /note="predicted pseudogene 5471; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1 long
                     SRA read, 14 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:432950"
                     /db_xref="MGI:MGI:3648310"
     CDS             39..380
                     /gene="Gm5471"
                     /codon_start=1
                     /product="eukaryotic translation initiation factor 1-like"
                     /protein_id="XP_036015556.1"
                     /db_xref="GeneID:432950"
                     /db_xref="MGI:MGI:3648310"
                     /translation="MSAIQNLHSLDPFADASKGDDLFPAGTEDYIHIRIQQRNGRKTL
                     KTVQGITDDYNKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQHKNICQFLIEIGL
                     TKDDQLKGHEF"
ORIGIN      
        1 cgcaggccgt ttccaccgag gaaaaggaat cgtattgtat gtctgctatc cagaacctcc
       61 actctttgga cccctttgct gatgcaagta agggtgatga cctgtttcct gctggcactg
      121 aggattatat ccatataaga attcaacaga gaaacggcag gaagaccctt aaaactgtcc
      181 aagggatcac tgatgattac aataaaaaga aactagtaaa ggcgtttaag aagaaatttg
      241 cctgcaatgg tactgtaatt gagcatccag aatatggaga agtaattcag ctacagggtg
      301 accagcataa gaacatatgc cagttcctga tagagattgg gctgactaag gacgatcagc
      361 tgaagggtca tgagttttaa gtgcttgtgg ctctctgaag cttaagtgag gatttccttg
      421 caatgagtag aatttccctt ctttcgcttg tcacaagttt aaaaacctca cagcttgtat
      481 aatgtaatca tttggggtct gcttttaact tggactagtg taatcccttc atgcaataaa
      541 ctgaaaagag cc
//
