LOCUS       NM_001034880            3112 bp    mRNA    linear   ROD 08-AUG-2023
DEFINITION  Mus musculus predicted gene 5460 (Gm5460), transcript variant 1,
            mRNA.
ACCESSION   NM_001034880 XM_006519208 XM_910597
VERSION     NM_001034880.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3112)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 3112)
  AUTHORS   Katayama S, Tomaru Y, Kasukawa T, Waki K, Nakanishi M, Nakamura M,
            Nishida H, Yap CC, Suzuki M, Kawai J, Suzuki H, Carninci P,
            Hayashizaki Y, Wells C, Frith M, Ravasi T, Pang KC, Hallinan J,
            Mattick J, Hume DA, Lipovich L, Batalov S, Engstrom PG, Mizuno Y,
            Faghihi MA, Sandelin A, Chalk AM, Mottagui-Tabar S, Liang Z,
            Lenhard B and Wahlestedt C.
  CONSRTM   RIKEN Genome Exploration Research Group; Genome Science Group
            (Genome Network Project Core Group); FANTOM Consortium
  TITLE     Antisense transcription in the mammalian transcriptome
  JOURNAL   Science 309 (5740), 1564-1566 (2005)
   PUBMED   16141073
REFERENCE   3  (bases 1 to 3112)
  AUTHORS   Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD,
            Collins FS, Wagner L, Shenmen CM, Schuler GD, Altschul SF, Zeeberg
            B, Buetow KH, Schaefer CF, Bhat NK, Hopkins RF, Jordan H, Moore T,
            Max SI, Wang J, Hsieh F, Diatchenko L, Marusina K, Farmer AA, Rubin
            GM, Hong L, Stapleton M, Soares MB, Bonaldo MF, Casavant TL,
            Scheetz TE, Brownstein MJ, Usdin TB, Toshiyuki S, Carninci P,
            Prange C, Raha SS, Loquellano NA, Peters GJ, Abramson RD, Mullahy
            SJ, Bosak SA, McEwan PJ, McKernan KJ, Malek JA, Gunaratne PH,
            Richards S, Worley KC, Hale S, Garcia AM, Gay LJ, Hulyk SW,
            Villalon DK, Muzny DM, Sodergren EJ, Lu X, Gibbs RA, Fahey J,
            Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M,
            Madan A, Young AC, Shevchenko Y, Bouffard GG, Blakesley RW,
            Touchman JW, Green ED, Dickson MC, Rodriguez AC, Grimwood J,
            Schmutz J, Myers RM, Butterfield YS, Krzywinski MI, Skalska U,
            Smailus DE, Schnerch A, Schein JE, Jones SJ and Marra MA.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC164099.3.
            
            On or before Feb 23, 2023 this sequence version replaced
            XM_006519208.1, NM_001034880.2.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMN00849384
                              [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            inferred exon combination :: based on alignments, homology
            RefSeq Select criteria    :: based on expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-463               AC164099.3         129487-129949
            464-532             AC164099.3         139257-139325
            533-604             AC164099.3         145112-145183
            605-686             AC164099.3         147576-147657
            687-720             AC164099.3         147766-147799
            721-800             AC164099.3         148669-148748
            801-869             AC164099.3         148819-148887
            870-947             AC164099.3         149165-149242
            948-1002            AC164099.3         149337-149391
            1003-1101           AC164099.3         152209-152307
            1102-1171           AC164099.3         153016-153085
            1172-1250           AC164099.3         153611-153689
            1251-1598           AC164099.3         154394-154741
            1599-1637           AC164099.3         155228-155266
            1638-1781           AC164099.3         156244-156387
            1782-3112           AC164099.3         158222-159552
FEATURES             Location/Qualifiers
     source          1..3112
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="14"
                     /map="14 20.8 cM"
     gene            1..3112
                     /gene="Gm5460"
                     /gene_synonym="EG432838"
                     /note="predicted gene 5460"
                     /db_xref="GeneID:432838"
                     /db_xref="MGI:MGI:3643519"
     exon            1..463
                     /gene="Gm5460"
                     /gene_synonym="EG432838"
                     /inference="alignment:Splign:2.1.0"
     CDS             222..2027
                     /gene="Gm5460"
                     /gene_synonym="EG432838"
                     /note="isoform 1 precursor is encoded by transcript
                     variant 1"
                     /codon_start=1
                     /product="uncharacterized protein LOC432838 isoform 1
                     precursor"
                     /protein_id="NP_001030052.2"
                     /db_xref="CCDS:CCDS49442.1"
                     /db_xref="GeneID:432838"
                     /db_xref="MGI:MGI:3643519"
                     /translation="MQYYGPQASCLVYLLLLLLLSTLFIAVQSFLYPRSGQKPYLEDS
                     ARFFSHEVRKARQTGVDEEDPLQYCDGDFDIYFIFDKSKAVNEWADLYTSWEDMVEKY
                     VNPKQRMSFILFDTRASIKMPLLSERWKIRQALTSIETLVIEGSANLHRGLEKANEQI
                     QTVNSGATKRPSLIIAVIWGEMTPQVLKESKDEADKARSMGAYIYCVGINNYDRQKLN
                     EITDNDENVFVVAHSDDLHELVDTIGTMTCLELREVEFPCPGENHPVLLRGYGFHNAK
                     NLNDVICRFKFNDSSIIDKNPIVKNATVMYCPAPKIAQPEQIILVEVSLNNGQDFLAH
                     RIRVNSSECIPPTMTTTPAPETSTVLTTSTTNPIPKPTIPGSPTILPPPPAPPRPPSP
                     APPPLPPPPPRPPPPLPLPPPPPLPPTSLVPLPPAEPSKEVLLSTVVLLLMLTPVVLW
                     WVWWLCCRPPVKALPAPVPQPTPQKKEKGPPPVPPPVPPPAPPPAPVTGRPIVIICCC
                     TCYDVCVRRGTEGPYINLDLLKDLCSRVPCTSKTGFFPPEEYLCLASCSQCHHPPHSC
                     PRPFPLLPSPAQVSPKAPLSLPPMQRTSQTPQRQY"
     exon            464..532
                     /gene="Gm5460"
                     /gene_synonym="EG432838"
                     /inference="alignment:Splign:2.1.0"
     exon            533..604
                     /gene="Gm5460"
                     /gene_synonym="EG432838"
                     /inference="alignment:Splign:2.1.0"
     exon            605..686
                     /gene="Gm5460"
                     /gene_synonym="EG432838"
                     /inference="alignment:Splign:2.1.0"
     exon            687..720
                     /gene="Gm5460"
                     /gene_synonym="EG432838"
                     /inference="alignment:Splign:2.1.0"
     exon            721..800
                     /gene="Gm5460"
                     /gene_synonym="EG432838"
                     /inference="alignment:Splign:2.1.0"
     exon            801..869
                     /gene="Gm5460"
                     /gene_synonym="EG432838"
                     /inference="alignment:Splign:2.1.0"
     exon            870..947
                     /gene="Gm5460"
                     /gene_synonym="EG432838"
                     /inference="alignment:Splign:2.1.0"
     exon            948..1002
                     /gene="Gm5460"
                     /gene_synonym="EG432838"
                     /inference="alignment:Splign:2.1.0"
     exon            1003..1101
                     /gene="Gm5460"
                     /gene_synonym="EG432838"
                     /inference="alignment:Splign:2.1.0"
     exon            1102..1171
                     /gene="Gm5460"
                     /gene_synonym="EG432838"
                     /inference="alignment:Splign:2.1.0"
     exon            1172..1250
                     /gene="Gm5460"
                     /gene_synonym="EG432838"
                     /inference="alignment:Splign:2.1.0"
     exon            1251..1598
                     /gene="Gm5460"
                     /gene_synonym="EG432838"
                     /inference="alignment:Splign:2.1.0"
     exon            1599..1637
                     /gene="Gm5460"
                     /gene_synonym="EG432838"
                     /inference="alignment:Splign:2.1.0"
     exon            1638..1781
                     /gene="Gm5460"
                     /gene_synonym="EG432838"
                     /inference="alignment:Splign:2.1.0"
     exon            1782..3112
                     /gene="Gm5460"
                     /gene_synonym="EG432838"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agaggtagga taccccagta cagccatgtc cccagtccct atgctctgag gccaccaagt
       61 ggaaagcagc agtaagaact ggtgagagga cacaagggct attgtcccta agtgcagata
      121 gaggcaccag agaacaaaat gaggggtggc tagaacttag cctaccgaga ccctggcaca
      181 agctcccaaa ttgtagcaga ctcacaggat cagccaagaa aatgcagtat tatggtcccc
      241 aggcttcctg tttggtgtac ctgctgctgc tgctactatt gtctacgcta ttcattgcag
      301 tccagagttt tctgtatcct cgatccggcc aaaaacccta tcttgaggac tctgctaggt
      361 tctttagtca tgaagtcaga aaggcaagac agactggggt agatgaggaa gatcctctgc
      421 aatattgtga tggtgacttt gacatttact tcatctttga caagtccaaa gctgtgaacg
      481 aatgggctga cttgtacacg tcctgggaag atatggtgga gaaatatgtg aaccccaaac
      541 agcgtatgag cttcattctc tttgatacca gagcttcaat caaaatgcca ctcctctcag
      601 aaagatggaa aatccgccaa gcgctcacca gcatcgagac ccttgtgata gaaggatcag
      661 caaacctaca cagaggactg gaaaaggcta atgaacagat ccaaacggtc aactcgggag
      721 ccactaagag gcctagtctg atcattgctg tcatttgggg ggaaatgaca ccacaagtat
      781 tgaaggagtc taaggacgag gctgataaag ctcggagcat gggggcgtac atttactgtg
      841 tcggtataaa caactatgat agacaaaagc tgaatgagat tacagacaac gacgaaaatg
      901 tgttcgttgt ggcccattct gatgatctcc atgagctagt agacacgatt ggcacaatga
      961 cctgccttga actcagagag gtggagtttc catgcccagg agaaaatcac ccagtgctct
     1021 taagaggata cggctttcac aatgcaaaga atctcaacga cgttatttgc agattcaagt
     1081 tcaatgactc ctccatcatc gataaaaatc caattgttaa gaatgccact gtcatgtatt
     1141 gccctgcacc aaagatagcg caacctgaac aaatcatctt agttgaagtt agcctgaaca
     1201 acggacaaga cttccttgcc cacagaatcc gtgtgaattc ttctgagtgt atacctccca
     1261 caatgaccac tactcctgcc ccagaaacct ctacagttct gacaacttca acaacaaacc
     1321 ctatccccaa accaactatt ccaggctccc ctactatact cccccctcct cccgctcctc
     1381 ctcgtcctcc ttcacctgct cctcccccac ttcctccacc tcctcctcgg ccacctccac
     1441 ctctacctct acctccacct ccacctctgc ctccaacttc acttgtgcct ctgccgccag
     1501 ctgagccaag caaggaagtt ttgctcagca ccgtggtact gctcctgatg ctgacccctg
     1561 tagtgctgtg gtgggtctgg tggctgtgct gcagaccgcc tgtcaaggcc ctgccagcac
     1621 ctgtaccaca accaacgccc caaaagaaag aaaagggccc tcctccagtg cctcctccag
     1681 tgcctccccc agctccaccc ccagcaccgg tcactgggcg ccccattgta atcatctgct
     1741 gctgtacctg ctatgatgtg tgtgtgagaa gaggaacaga ggggccgtat atcaaccttg
     1801 acctcctgaa ggacctctgt tctcgagttc cctgcacctc taagactggc ttcttcccac
     1861 ctgaggagta cctgtgcctg gcctcctgtt ctcagtgcca ccatcctcca cacagttgtc
     1921 ccaggccatt tcctttgctc ccttcccctg cccaggtgtc tcccaaagcc cccttgtcac
     1981 tgcctcccat gcagcggacc tctcagacac cacagaggca atattgagag gttttctttg
     2041 ctgctaattt ggacccatgt atctgttctt ggattttaat tttaaaagag ttggaatttt
     2101 tttattagga ggtttgtcat ccaaaggtaa atctcagatg tgtttctggg gcactgggaa
     2161 agacagaagt tcgtggtgtc atgtggctag gcgtagatga gttctacagc tttgtcacca
     2221 gatccatgac acaccacagg ctcttaagct ctatacgaag cacaatccca gattcatccc
     2281 gagggtaaac ttgacagctg tgtaaacatg cctggagcta caagtgtgca ccactgcatc
     2341 tagcttttta gattggcaat ggggatccca aactgaggtc cttgtacttg catgccaaat
     2401 atttaactac ctgagccact ttgtagccca gtggttctca gcctgtaggg catggcccct
     2461 ttgggggggt cacataacag atatctggca tatcagacat ctacattata attcaaaaca
     2521 gtagcaaaat tacagttata aagtagcaac aaaataattt tatggttggg gttcaccata
     2581 acatgaggaa ctgtgttaaa gtgacacagc attaggaagg tagagaacta ccctgttcta
     2641 gccccttggt taaccttttg ctttgttctc tatatgggtt ttgttttgca aagcagtttc
     2701 aagtcatgca tatacagaga tttttttaaa caaatgccag agtgttccta ctccactgtc
     2761 agacaggaag aagtatattg gataaaggca tatggagcct gactgacagg tggcaaggtc
     2821 acatttgtag tcccatgggg cagggttcag ggagaaggaa cacagatatc cctagagtgt
     2881 ctttaccctg aacacatcac ccaagatgac atatagatgt gtccagagca gccacatgca
     2941 agcttacaaa aggttatcac gacactagat ctctggaaac ccagaaaata aatatttata
     3001 gtacttatgc caagacaaat gtaggcatgc aagagaaatt tcatctattc catggatgta
     3061 gtgtgtatta aggctctctc tagctggctt ggtgaataaa gctcagttca ca
//
