LOCUS       XM_036164658             514 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus predicted gene, 54278 (Gm54278), mRNA.
ACCESSION   XM_036164658
VERSION     XM_036164658.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000070.7) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 8% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..514
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="4"
     gene            1..514
                     /gene="Gm54278"
                     /note="predicted gene, 54278; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 92%
                     coverage of the annotated genomic feature by RNAseq
                     alignments"
                     /db_xref="GeneID:118568720"
                     /db_xref="MGI:MGI:6723578"
     CDS             1..468
                     /gene="Gm54278"
                     /codon_start=1
                     /product="collagen alpha-2(I) chain-like"
                     /protein_id="XP_036020551.1"
                     /db_xref="GeneID:118568720"
                     /db_xref="MGI:MGI:6723578"
                     /translation="MASPRGAGPGGGGGAAPGGRDSPRGALGVAGARRTSVRAGTRAA
                     ASRARARPSLRPGPGGERGIRAAGAAARPEPRSWPGHARARARRLGVRRCWATSVTSQ
                     DGMASARESPGAGDAPGRRNYPIPSSALSHRHRSSSPVRFSNPAEALPRNLIS"
ORIGIN      
        1 atggctagcc cgcgcggggc ggggcctggc ggcgggggcg gggccgcacc agggggccgg
       61 gactccccgc ggggcgcact gggtgtggca ggggctcggc ggacaagtgt gcgggctgga
      121 acccgggccg ccgcctcccg cgcccgggct cgcccgtccc tgaggccggg cccgggcggg
      181 gaacggggga tccgcgctgc aggcgccgcc gcacgacccg agccccggag ctggccgggt
      241 cacgctcgcg ctcgtgcacg ccgtctcggc gttcgccgtt gctgggcaac ctccgtgacg
      301 tcacaggacg gaatggcgag tgcgagggag agcccgggtg caggggatgc accaggccgt
      361 aggaactacc ctatcccatc ctctgctctg tctcacaggc atcgcagctc cagcccagtg
      421 aggttcagca accccgcaga ggccctccca cgaaacctca tctcctaatc ccttcagacc
      481 tctctggacc ctggtggcca ggacctcggt ccta
//
