LOCUS       XM_036164649            2558 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus predicted gene, 54275 (Gm54275), transcript
            variant X1, mRNA.
ACCESSION   XM_036164649
VERSION     XM_036164649.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000070.7) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2558
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="4"
     gene            1..2558
                     /gene="Gm54275"
                     /note="predicted gene, 54275; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 28
                     Proteins, and 44% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:118568715"
                     /db_xref="MGI:MGI:6723572"
     CDS             9..2558
                     /gene="Gm54275"
                     /codon_start=1
                     /product="vomeronasal type-2 receptor 116-like isoform X1"
                     /protein_id="XP_036020542.1"
                     /db_xref="GeneID:118568715"
                     /db_xref="MGI:MGI:6723572"
                     /translation="MKKLCAFTISLLFLKFSLILCCWSEPSCFWRIKNSDDNDGDLQR
                     ECHFYLGAADTPVEDNFYSSLLKFRIAASEYEFLLVMFFAIDEINRNPYLLPNITLMF
                     SFIGGNCQDLLRVMDQAYTQINGHMNFVNYFCYLDDSCAIGLTGPSWKTSLKLAMHSS
                     MPLVFFGPFNPNLRDHDRLPHVHQVAPKDTHLSHGMVSLMFHFRWTWIGMVISDDDQG
                     IQFLSDLREESQRHGICLAFVNMIPENMQIYMTRATIYDQQIMTSSAKVVIIYGEMNS
                     TLEVSFRRWEELGARRIWITTSQWDVITNKKDFTLNLFHGTITFAHHRVEIPKLNKFM
                     QTMNTAKYPVDISHTILEWNYFNCSISKNSIRMHHITFNNTLEWTSLHNYDMAMSDEG
                     YSLYNAVYAVAHTYHEYIFQQVESQKKAKPKRYFTACQQVSSLMKTRVFMNPVGELVN
                     MKHRENQCTEYDIFIIWNFPQGLGLKVKIGSYLPCFPQRQKLHISDDLEWAKGGTSVP
                     SSVCSVACTAGFRKIYQKETADCCFDCVQCPENEISNETADMEQCVRCPDDKYANIEQ
                     THCLSRAVSFLAYEDPLGMALGCMALSFSAITILVLVTFVKHNDTPIVKANNRILSYI
                     LLISLVFCFLCSLLFIGPPDQVTCILQQTTFGVFFTVSVSTVLAKTITVVMAFKLTTP
                     GRRMRGMMMTGAPKLVIPICTLIQLVLCGIWLVTSPPFIDRDIQSEHGKIVILCNKGS
                     VIAFHVVLGYLGSLALGSFTLAFLARNLPDTFNEAKFLTFSMLVFCSVWITFLPVYHS
                     TRGRVMVVVEVFSILASSAGLLMCIFVPKCYVILIRPDSNIIKKHKGKVLN"
ORIGIN      
        1 tagcagacat gaagaagctc tgtgctttca cgatttcatt gttgtttctg aagttttctc
       61 tcatcttgtg ctgttggagt gaaccaagtt gcttttggag gataaagaat agtgatgata
      121 atgacggaga tttgcaaagg gaatgtcatt tttaccttgg ggcagctgat acaccagttg
      181 aagataattt ttatagttca cttttaaaat ttagaattgc agcaagtgaa tatgagtttc
      241 ttctcgtaat gttttttgct atcgatgaga tcaacaggaa tccttatctt ttacccaaca
      301 taactttgat gttctccttc attggtggaa actgtcagga tttattgaga gttatggacc
      361 aagcatatac acaaataaat ggacatatga attttgttaa ttatttctgt tatttagatg
      421 attcatgtgc cataggtctt acaggaccat catggaaaac ttccttaaaa ctggcaatgc
      481 actcttcgat gccactggtt ttctttggac catttaatcc taacctacgc gaccatgacc
      541 ggctgcccca tgtccatcag gtagccccca aggacacaca tttgtcccat ggcatggtct
      601 ccttgatgtt tcactttaga tggacttgga taggaatggt catctcagat gatgaccagg
      661 gtattcagtt tctctcagat ttaagagaag aaagccaaag gcatgggatc tgtttagctt
      721 ttgttaatat gatcccagaa aacatgcaga tatacatgac aagggctaca atatatgatc
      781 aacaaattat gacatcttca gcaaaggttg ttatcattta tggtgaaatg aactctactc
      841 tagaagtaag ctttagaaga tgggaagagt taggtgctcg gagaatctgg atcacaacct
      901 cacaatggga tgtcatcaca aataaaaaag acttcaccct taatctcttc catgggacta
      961 tcacttttgc acaccacaga gttgagattc ctaaattaaa taaattcatg caaacaatga
     1021 acactgccaa atacccagta gatatttctc atactatatt ggagtggaat tattttaatt
     1081 gttcaatatc taagaacagc attagaatgc atcatattac attcaacaac accttggaat
     1141 ggacatcact gcacaactat gatatggcga tgagtgatga aggttacagt ttatataatg
     1201 ctgtttatgc tgtggcccac acctaccatg aatacatttt tcaacaagta gagtctcaga
     1261 aaaaggcaaa acccaaaaga tatttcactg cttgtcagca ggtgtcttcc ttgatgaaaa
     1321 ccagggtatt tatgaaccct gttggagaac tggtgaacat gaagcatagg gaaaatcagt
     1381 gtacagagta tgatattttc atcatttgga attttccaca aggccttgga ttaaaagtga
     1441 aaataggaag ctatttacct tgttttccac agagacaaaa acttcatata tctgatgatt
     1501 tggaatgggc caagggagga acatcagttc cctcctccgt gtgtagtgtg gcatgtactg
     1561 ctggattcag gaaaatttat caaaaagaaa cagcagactg ctgctttgat tgtgttcagt
     1621 gcccagaaaa tgagatttcc aacgaaacag cagatatgga acagtgtgtg aggtgtccag
     1681 atgataagta tgccaacata gagcaaaccc actgcctctc aagagctgta tcatttctgg
     1741 cttatgaaga tccattgggg atggctctag gctgcatggc actgtccttc tcggccatca
     1801 caattctagt cctcgtcaca tttgtgaaac acaacgatac tcccattgtg aaggccaata
     1861 accgcattct cagctacatc ctgctcatct ctctcgtctt ctgctttctc tgctccctgc
     1921 tcttcattgg acctcccgac caggtcacct gcatcttgca gcagaccaca tttggagtat
     1981 ttttcactgt gtctgtttct acagtgttgg ccaaaacaat aactgtggtc atggctttca
     2041 agctcactac tccaggaaga aggatgagag ggatgatgat gacaggggca cctaagttgg
     2101 tcattcccat ttgtaccctg atccaacttg ttctctgtgg aatctggttg gtcacatctc
     2161 ctccctttat tgacagagat atacaatctg agcatgggaa gattgtcatt ctttgcaata
     2221 aaggctcagt cattgccttc cacgtcgtcc tgggatactt gggctccttg gctctgggga
     2281 gcttcacttt ggctttcttg gctaggaacc ttcctgacac attcaatgaa gccaagttcc
     2341 taactttcag catgctggtg ttctgcagtg tctggatcac cttcctccct gtctaccaca
     2401 gcaccagggg gagggtcatg gtggttgtgg aggttttctc catcttggct tctagtgcag
     2461 ggttgctaat gtgtatcttt gtcccaaagt gttatgttat tttaattaga ccagattcaa
     2521 atattataaa gaaacataaa ggtaaagtgc ttaattga
//
