LOCUS       XM_036163487            3012 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus predicted gene, 54180 (Gm54180), transcript
            variant X1, mRNA.
ACCESSION   XM_036163487
VERSION     XM_036163487.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000069.7) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3012
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="3"
     gene            1..3012
                     /gene="Gm54180"
                     /note="predicted gene, 54180; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1 EST,
                     9 long SRA reads, and 57% coverage of the annotated
                     genomic feature by RNAseq alignments, including 18 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:118568593"
                     /db_xref="MGI:MGI:6723383"
     CDS             1421..2794
                     /gene="Gm54180"
                     /codon_start=1
                     /product="uncharacterized protein Gm54180 isoform X1"
                     /protein_id="XP_036019380.1"
                     /db_xref="GeneID:118568593"
                     /db_xref="MGI:MGI:6723383"
                     /translation="MVSEAVARDARKQTGRKREKVGRSGHPSLWPRAAHSSQALYAGS
                     YSSVCRVLQFSGSVCRVLQFSGSVCRVLQFSGSVCRVLQFCMPGLTVLRLCMPGLTVL
                     YAGSYSSQALYAGSHSSQALYAGSHSSQALYAGSYSSQALYAGSYSSVCRVLQFSGSV
                     CRVSQFSGSVCRVSQFSGSVCRVLQFSGSVCRVLQFSGSVCRVLQFCMPGLTVLRLCM
                     PGLTVLYAGSYSSQALYAGSHSSQALYAGSHSSQALYAGSYKFCMPGLTVLRLCMPGL
                     TSSVCRVLQFSGSVCRVLQFSGSVCRVLQFCMPGLTVLRLCMPGLTVLRLCMPGLTVL
                     RLCMPGLTVLYAGSYSSQALYAGSYSSQALYAGSYSSQALYAGSYSSQALYAGSYKFC
                     MPGLTVLRLCMPGLTVLYAGSYSSQALYAGSYKFCMPGLTSSVCRVLQVLYAGSYKLT
                     VTSLPES"
ORIGIN      
        1 tttttttttt cctctgtact tcttcttttt tttttttctt tccatttttt attaggtatt
       61 tagctcattt acatttccaa tgctatacca aaagtccccc atacccaccc atccccactc
      121 ccctacccgc ccactccccc tttttggccc tggcgttccc ctgttctggg gcatataaag
      181 tttgtgtgtc caatgggcct ctctttccag tgatggccga ctaggccatc ttttgataca
      241 tatgcagcta gagtcaagag ctccggggta ctggttagtt cataatgttg atccacctat
      301 agggttgcag atccctttag caccttgggt actttctcta gctcctccat tgggagccct
      361 gtgatccatc cattagctga ctgtgggcat ccacttctgt gtttgctagg ccccggcata
      421 gtctcacaag agacagctac atctgggtcc tttcgataaa atcttgctag tgtatgcaat
      481 ggtgtcagcg tttggatgct gattatgggg tggatccctg gataaggcag tctctacatg
      541 gtccatcctt tcatctcagc tccaaacttt gtctctgtaa ctccttccaa gggtgttttg
      601 ttcccacttc taaggagggg catagtgtcc acacttcagt cttcattttt cttgagtttc
      661 atgtgtttag gaaattgtat cttatatctt gggtatccta ggttttgggc taatatccac
      721 ttatcagtga gtacatattg tgtgagttcc tttgtgaatg tgttacctca ctcaggatga
      781 tgccctccag gtccatccat ttggctagga ggacacatgc tccactatgt tcatagcagc
      841 cttatttata atagccagaa gctggaaaga acccagatgc ccctcaacag aggaatggat
      901 acagaaaatg tggtacatct acacaatgga gtactactca gctattaaaa agaatgaatt
      961 tatgaagctt gactttttaa accacgacct acactagccc actcaaggac agtgaagctt
     1021 tagaggctgg ctctgtaact cgctagctgt gcaggaacag tgccaataga acccatcccc
     1081 agctatggga tcaactgaca cataaccatt attcacatgg tgaagttaca tattaatatt
     1141 ataatagtgt ttataggggc attgtacaaa agagatctgt tttccaagac aatgtacagg
     1201 aaagcacaat gctgaagtta gagaatgact caattcttct aaacagttta ataagactta
     1261 taagaaatta cgaaagcgca gacattgaaa atctagaaac atgtcacaga ttagaaagca
     1321 tttaactttc ctaagccttg tgttcttctg agaaaacagg agttgggtcc caagtaggca
     1381 ctggtgatgc cgtttcctgt actatagctt ccttctcacc atggtttcag aagctgtggc
     1441 tagagatgcc agaaagcaga caggaaggaa gcgagaaaag gtggggcgct ctgggcatcc
     1501 ctccctatgg ccccgagcag ctcacagttc tcaggctctg tatgccgggt cttacagttc
     1561 tgtatgccgg gtcttacagt tctcaggctc tgtatgccgg gtcttacagt tctcaggctc
     1621 tgtatgccgg gtcttacagt tctcaggctc tgtatgccgg gtcttacagt tctgtatgcc
     1681 gggtcttaca gttctcaggc tctgtatgcc gggtcttaca gttctgtatg ccgggtctta
     1741 cagttctcag gctctgtatg ccgggtctca cagttctcag gctctgtatg ccgggtctca
     1801 cagttctcag gctctgtatg ccgggtctta cagttctcag gctctgtatg ccgggtctta
     1861 cagttctgta tgccgggtct tacagttctc aggctctgta tgccgggtct cacagttctc
     1921 aggctctgta tgccgggtct cacagttctc aggctctgta tgccgggtct tacagttctc
     1981 aggctctgta tgccgggtct tacagttctc aggctctgta tgccgggtct tacagttctg
     2041 tatgccgggt cttacagttc tcaggctctg tatgccgggt cttacagttc tgtatgccgg
     2101 gtcttacagt tctcaggctc tgtatgccgg gtctcacagt tctcaggctc tgtatgccgg
     2161 gtctcacagt tctcaggctc tgtatgccgg gtcttacaag ttctgtatgc cgggtcttac
     2221 agttctcagg ctctgtatgc cgggtcttac aagttctgta tgccgggtct tacagttctc
     2281 aggctctgta tgccgggtct tacagttctc aggctctgta tgccgggtct tacagttctg
     2341 tatgccgggt ctcacagttc tcaggctctg tatgccgggt ctcacagttc tcaggctctg
     2401 tatgccgggt cttacagttc tcaggctctg tatgccgggt cttacagttc tgtatgccgg
     2461 gtcttacagt tctcaggctc tgtatgccgg gtcttacagt tctcaggctc tgtatgccgg
     2521 gtcttacagt tctcaggctc tgtatgccgg gtcttacagt tctcaggctc tgtatgccgg
     2581 gtcttacaag ttctgtatgc cgggtcttac agttctcagg ctctgtatgc cgggtcttac
     2641 agttctgtat gccgggtctt acagttctca ggctctgtat gccgggtctt acaagttctg
     2701 tatgccgggt cttacaagtt ctgtatgccg ggtcttacaa gttctgtatg ccgggtctta
     2761 caagctcaca gtcacatcac ttcctgagtc ctgaagggat ggtcatcacg tccttagtgt
     2821 gatacagact ccaatttacc tattaacgag ctttattctc aaagcccatt tgaaagttat
     2881 ccaaacaaat catcctcaga gaagccaagc tacatgttac atgctgtaag agctgtgttc
     2941 acaggtcact gtacaaagac catgctgctc caagttttca gcgttgtgac ttcctgccct
     3001 gtctagcagg at
//
