LOCUS       XM_036158285            3730 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus predicted gene, 53808 (Gm53808), transcript
            variant X3, mRNA.
ACCESSION   XM_036158285
VERSION     XM_036158285.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000079.7) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3730
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="13"
     gene            1..3730
                     /gene="Gm53808"
                     /note="predicted gene, 53808; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 34
                     long SRA reads, 1 Protein, and 77% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     46 samples with support for all annotated introns"
                     /db_xref="GeneID:118568080"
                     /db_xref="MGI:MGI:6722656"
     CDS             1148..3073
                     /gene="Gm53808"
                     /codon_start=1
                     /product="MLV-related proviral Env polyprotein-like"
                     /protein_id="XP_036014178.1"
                     /db_xref="GeneID:118568080"
                     /db_xref="MGI:MGI:6722656"
                     /translation="MKGPAFSKPLKDKINPWGPLIVLGILIRAGVSVQHDSPHQVFNV
                     TWRVTNLMTGQTANATSLLGTMTDAFPKLYFDLCDLIGDDWDETGLGCRTPGGRKRAR
                     TFDFYVCPGHTVPTGCGGPREGYCGKWGCETTGQAYWKPSSSWDLISLKRGNTPRNQG
                     PCYDSSAVSSDIKGATPGGRCNPLVLEFTDAGKKASWDGPKVWGLRLYRSTGTDPVTR
                     FSLTRQVLNIGPRVPIGPNPVITDQLPPSRPVQIMLPRPPQPPPPGAASIVPETAPPS
                     QQPGTGDRLLNLVDGAYQALNLTSPDKTQECWLCLVAGPPYYEGVAVLGTYSNHTSAP
                     ANCSVASQHKLTLSEVTGQGLCVGAVPKTHQALCNTTQKTSDGSYYLAAPAGTIWACN
                     TGLTPCLSTTVLDLTTDYCVLVELWPKVTYHSPGYVYGQFERKTKYKREPVSLTLALL
                     LGGLTMGGIAAGVETGTTALVATKQFEQLQAAIHTDLGALEKSVSALEKSLTSLSEVV
                     LQNRRGLDLLFLKEGGLCAALKEKCCFYADHTGVVRDSMAKLRERLNQRQKLFESGQG
                     WFEGLFNRSPWFTTLISTIMGPLIILLLILLFGPCILNRLVQFVKDRISVVQALVLTQ
                     QYHQLKSIDPEEVESRE"
ORIGIN      
        1 cccccgtcta aatttttgct ttcggtttta cgccgaagcc gcgccgcgcg tctgatttgt
       61 ttgttgttct tttgttcttc gttagttttc ttctgtcttt aagtgttttc gagatcatgg
      121 gacagaccgt aactacccct ctgagtttaa ccttgcagca ctggggagat gtccagcgca
      181 ttgcatccaa ccagtctgtg gatgtcagga agaggcgctg gattaccttc tgttccgctg
      241 aatggccaac tttcaatgtg ggatggcctc aggatggtac tttcaattta agtattatct
      301 ctcaggttaa gtctagagtg ttttgtcctg gtccccacgg acacccggat caggtcccat
      361 atatcgtcac ctgggaggca cttgcctatg acccccctcc gtgggtcaaa ccgtttgtgt
      421 ctcctaaact tcctcccttg ccgacagctc ccgtcctccc gcccggtcct tctgcgcaac
      481 ctccgtcccg atctgccctt taccctgccc ttaccccctc tataaagtcc aaacctccta
      541 agccccaggt tctccctgat agcggcggac ccctcattga ccttctcaca gaggaccccc
      601 cgccgtacag agcacaaccc tcctcctctg ccagggagaa cgacgaagaa gaggcggcca
      661 ccacctccga ggtttccccc ccttctccca tggtgtctcg actgcgggga aggagagacc
      721 ctcccgcagt ggactccacc acctcccagg catttccact ccgcatgggg ggagatggcc
      781 agcttcagta ttggccgttt tcctcttcgg atttatacaa ttggaaaaat aataaccctt
      841 ccttttctga agatccagct cacttacagg ccctccaagc agtacaacga gaggtctgga
      901 agccactggc cgctgcctat caggaccagc tggaccagcc agtgatacca caccccttcc
      961 gtgtcggcga caccgtgtgg gtacgccggc accagactaa gaacttggaa cctcgctgga
     1021 aaggacccta caccgtcctg ctgaccaccc ccaccgctct caaagtagac ggcatcgctg
     1081 cgtggatcca cgccgctcac gtaaaagcgg cgacaacccc tccggccgga acagcatcag
     1141 gaccgacatg aaaggtccag cgttctcaaa accccttaaa gataagatta acccgtgggg
     1201 ccccctaata gtcctgggga tcttaataag ggcaggagta tcagtacaac atgacagccc
     1261 tcatcaggtc ttcaatgtta cttggagagt taccaactta atgacaggac aaacagctaa
     1321 tgctacctcc ctcctgggga caatgaccga tgcctttcct aaactgtact ttgacttgtg
     1381 cgatttaata ggggacgact gggatgagac tggactcggg tgtcgcactc ccgggggaag
     1441 aaaaagggca agaacatttg acttctatgt ttgccccggg catactgtac caacagggtg
     1501 tggagggccg agagagggct actgtggcaa atggggctgt gagaccactg gacaggcata
     1561 ctggaagcca tcatcatcat gggacctaat ttcccttaag cgaggaaaca cccctcggaa
     1621 tcagggcccc tgttatgatt cctcagcggt ctccagtgac atcaagggcg ccacaccggg
     1681 gggtcgatgc aatcccctag tcctggaatt cactgacgcg ggcaaaaagg ccagctggga
     1741 tggccccaaa gtatggggac taagactgta ccgatccaca gggaccgacc cggtgacccg
     1801 gttctctttg acccgccagg tcctcaatat agggccccgc gtccccattg ggcctaatcc
     1861 cgtgatcact gaccagttac ccccctcccg acccgtgcag atcatgctcc ccaggcctcc
     1921 tcagcctcct cctccaggcg cagcctctat agtccctgag actgccccac cttctcaaca
     1981 acctgggacg ggagacaggc tgctaaacct ggtagatgga gcctaccaag ctctcaacct
     2041 caccagtcct gacaaaaccc aagagtgctg gttgtgtctg gtagcgggac ccccctacta
     2101 cgaaggggtt gccgtcctag gtacttattc caaccatacc tctgccccag ctaactgctc
     2161 cgtggcctcc caacacaagc tgaccctgtc cgaagtgacc ggacagggac tctgcgtagg
     2221 agcagttccc aaaacccatc aggccctgtg taataccacc cagaagacga gcgacgggtc
     2281 ctactatctg gctgctcccg ccgggaccat ttgggcttgc aacaccgggc tcactccctg
     2341 cctatctacc actgtactcg acctcaccac cgattactgt gtcctggttg agctctggcc
     2401 aaaggtgacc taccactccc ctggttatgt ttatggccag tttgagagaa aaaccaaata
     2461 taaaagagag ccggtgtcat taactctggc cctgctgttg ggaggactta ctatgggcgg
     2521 catagctgca ggagtagaaa ccgggactac agccctagtg gccaccaaac aattcgagca
     2581 gctccaggca gccatacata cagaccttgg ggctttagaa aagtcagtca gtgccctaga
     2641 aaagtctctg acctcgttgt ctgaggtggt cctacagaac cggaggggat tagatctact
     2701 gttcctaaaa gaaggaggat tatgtgctgc cctaaaagaa aaatgctgtt tctacgcgga
     2761 ccacactggc gtagtaagag atagcatggc aaagctaaga gaaaggttaa accagagaca
     2821 aaaattgttc gaatcaggac aagggtggtt tgagggactg tttaacaggt ccccatggtt
     2881 cacgacctta atatccacca ttatgggccc cttgataata cttttattaa tcctactctt
     2941 cggaccctgt attctcaacc gcttggtcca gtttgtaaaa gacagaattt cggtagtgca
     3001 ggccctggtt ttgacccaac agtatcacca actcaaatca atagatccag aagaagtgga
     3061 atcacgtgaa taaaagattt tattcagttt ccagaaagag gggggaatga aagaccccac
     3121 catcaggctt agcaagctag ctgcagtaac gccattttgc aaggcatgaa aaagtaccag
     3181 agctgagttc tcaaaagtta caagaaagtt cagttaaaga ttaacagtta aagattaagg
     3241 ctgaataata ctgggacagg ggccaaatat cggtggtcaa gcacctgggc cccggctcag
     3301 ggccaagaac agatggctct cagacgtcag tgttagcaga actagcttca ctgatttaga
     3361 aaaatagagg tgcacagtgc tctggccact ccttgaacct gtgtgtctgc caatgttctg
     3421 accaggtgtg tgcccattgt tgaaccttca ttagaccctt tcctcgtacc cctcccatac
     3481 ccatttcttg aaaatagaca ttgtttagaa ctaaaaagtc ccacctcagt ttccccaaat
     3541 gaccgagaaa taccccaagc cttattcaaa ctaaccaacc agctcgcttc tcgcttctgt
     3601 aaccgcgctt tttgctcccc agccccagcc ctataaaaag ggtaaaaact ccacactcgg
     3661 cgcgccagtc ctccgataga ctgcgtcgcc cgggtacccg tgttcccaat aaagcctctt
     3721 gctgtttgca
//
