LOCUS       XM_036158236            2454 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus predicted gene, 53778 (Gm53778), transcript
            variant X1, mRNA.
ACCESSION   XM_036158236
VERSION     XM_036158236.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000079.7) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2454
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="13"
     gene            1..2454
                     /gene="Gm53778"
                     /note="predicted gene, 53778; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 501
                     long SRA reads, and 90% coverage of the annotated genomic
                     feature by RNAseq alignments, including 29 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:118568032"
                     /db_xref="MGI:MGI:6722596"
     CDS             314..1405
                     /gene="Gm53778"
                     /codon_start=1
                     /product="uncharacterized protein Gm53778 isoform X1"
                     /protein_id="XP_036014129.1"
                     /db_xref="GeneID:118568032"
                     /db_xref="MGI:MGI:6722596"
                     /translation="MGQTVTTPLSLTLQHWGDVQRIASNQSVDVRKRRWITFCSAEWP
                     TFNVGWPQDGTFNLSIISQVKSRVFCPGPHGHPDQVPYIVTWEALAYDPPPWVKPFVS
                     PKPPPLPTAPVLPPGPSAQPPSRSALYPALTPSIKSKPPKPQVLPDSGGPLIDLLTED
                     PPAVRSTTFLLCQRERRRRGGHHLRGFPPFSHGVSTAGKERPSRSGLHLLPGIPTPYG
                     GDGQLQYWPFSSSDLYNWKNNNPSFSEDPAHLQALQAVQREVWKPLAAAYQDQQDQPV
                     IPHPFRVGDTVWVRRHQTKNLEPRWKGPYTVLLTTPTALKVDGIAAWIHAAHVKAATT
                     PPAGTASGPTWKVQRSQNPLKIRLTRGPP"
ORIGIN      
        1 agatctgtat ctggcggttc cgcggaagaa ctgacgagtt cgtattcccg gccgcagccc
       61 ctgggagacg tcccagcggc ttcgggggcc cgttttgtgg cccattctgt atcagttaac
      121 ctacccgagt cggacttttt ggagctccgc cactgtacgt ggctttgttg ggggacgaga
      181 gacagagaca cttcccgccc ccgtctggat ttttgctttc ggttttacgc cgaaaccgcg
      241 ctgcgcgtct gatttgtttt attgctcttt tgttcttcgt tagttttttc tgtctttaag
      301 tgttttcaag atcatgggac agaccgtaac tacccctctg agtctaacct tgcagcactg
      361 gggagatgtc cagcgcattg catccaacca gtctgtggat gtcaggaaga ggcgctggat
      421 taccttctgt tccgccgaat ggccaacttt caatgtagga tggcctcagg atggtacttt
      481 caatttaagt attatctctc aggttaagtc tagagtgttt tgtcctggtc cccacggaca
      541 cccggatcag gtcccatata tcgttacctg ggaggcactt gcctatgacc cccctccgtg
      601 ggtcaaaccg tttgtttctc ctaaacctcc tcccttgccg acagctcccg tcctcccgcc
      661 cggtccttct gcgcaacctc cgtcccgatc tgccctttac cctgccctta ccccctctat
      721 aaagtccaaa cctcctaagc cccaggttct ccctgatagc ggcggacctc tcattgacct
      781 tctcacagag gacccccccg ccgtacggag cacaaccttc ctcctctgcc agagagaacg
      841 aagaagaaga ggcggccacc acctccgagg tttccccccc ttctcccatg gcgtctcgac
      901 tgcggggaag gagagaccct cccgcagcgg actccacctc ctcccaggca ttcccactcc
      961 gtatggggga gatggccagc ttcagtactg gccgttttcc tcctctgact tatataattg
     1021 gaaaaataat aacccttcct tttctgaaga tccagctcac ttacaggccc tccaagcagt
     1081 acaacgagag gtctggaagc ctctggccgc tgcctatcag gaccaacaag accagcctgt
     1141 gataccacac cccttccgtg tcggcgacac cgtgtgggta cgccggcacc agactaagaa
     1201 cttggaacct cgctggaaag gaccctacac cgtcctgctg accaccccca ccgctctcaa
     1261 agtagacggc atcgctgcgt ggatccacgc cgctcacgta aaagcggcga caacccctcc
     1321 ggccggaaca gcatcaggac cgacatggaa ggtccagcgt tctcaaaacc ccttaaagat
     1381 aagattaacc cgtgggcccc cctgatagtc ctggggatct taataagggc aggagtatca
     1441 gtaccacatg acagccctca tcaggtcttc aatgttactt ggagagttac caacttaatg
     1501 acaggacaaa cagctaatgc tacctccctc ctggggacaa tgaccgatgc ctttcccaaa
     1561 ctgtactttg acttgtgcga tttaataggg gacgactggg atgagactgg actcgggtgt
     1621 cgcactcccg ggggaagaaa aagggcaaga acatttgact tctatgtttg ccccgggcat
     1681 actgtaccaa cagggtgtgg aggcccgaga gagggctact gtggcaaatg gggctgtgag
     1741 accactggac aggcatactg gaagccatca tcatcatggg accttatttc ccttaagcga
     1801 ggaaacaccc ctcggaatca gggccccttg ataatactct tattaatcct actcttcgga
     1861 ccctgtattc tcaaccgctt ggtccagttt gtaaaagaca gaatttcggt ggtgcaggcc
     1921 ctggttctga cccaacagta tcaccaactc aaatcaatag gtccagaaga agtggaatca
     1981 cgtgaataaa agattttatt cagtttccag aaagaggggg gaatgaaaga ccccaccata
     2041 aggcttagca agctagctgc agtaacgcca ttttgcaagg catgaaaaag taccagagct
     2101 gggttctcaa aagttacaag gaagttcagt tatagattaa cagttaaaga tcaaggctga
     2161 atagcactgg gacaggggcc gaacaggata tcggtggtca agcacctggg ccccggctca
     2221 gggccaagaa cagatggttc tcagataaag cggaaccagc aacagacaca gaagccccga
     2281 tagacgtcag tgttagcaga actagcttca ctgatttaga aaaatagagg tgcacagtgc
     2341 tctggtcact ccttgaacct gtgtgtctgc caacgttctg accagatatg tgcccattgc
     2401 tgaaccttca ttagactctt tccttgtacc cctcccctac ccatttcttg aaaa
//
