LOCUS       XM_036157124            2284 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus predicted gene, 53666 (Gm53666), mRNA.
ACCESSION   XM_036157124
VERSION     XM_036157124.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000077.7) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2284
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="11"
     gene            1..2284
                     /gene="Gm53666"
                     /note="predicted gene, 53666; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3 long
                     SRA reads, 1 Protein, and 92% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:118567893"
                     /db_xref="MGI:MGI:6722377"
     CDS             359..2284
                     /gene="Gm53666"
                     /codon_start=1
                     /product="MLV-related proviral Env polyprotein"
                     /protein_id="XP_036013017.1"
                     /db_xref="GeneID:118567893"
                     /db_xref="MGI:MGI:6722377"
                     /translation="MEGPAFSKPLKDKINPWGPLIILGILIRAGVSVQHDSPHQVFNV
                     TWRVTNLMTGQTANATSLLGTMTDAFPKLYFDLCDLIGDDWDETGLGCRTPGGRKRAR
                     TFDFYVCPGHTVPTGCGGPREGYCGKWGCETTGQAYWKPSSSWDLISLKRGNTPQNQG
                     PCYDSSAVSSDIKGATPGGRCNPLVLEFTDAGKKASWDGPKVWGLRLYRSTGTDPVTR
                     FSLTRQVLNIGPRVPIGPNPVITDQLPPSRPVQIMLPRPPQPPPPGAASIVPETAPPS
                     QQPGTGDRLLNLVDGAYQALNLTSPDKTQECWLCLVAGPPYYEGVAVLGTYSNHTSAP
                     ANCSVASQHKLTLSEVTGQGLCVGAVPKTHQALCNTTQKTSDGSYYLAAPAGTIWACN
                     TGLTPCLSTTVLDLTTDYCVLVELWPKVTYHSPGYVYGQFERKTKYKREPVSLTLALL
                     LGGLTMGGIAAGVGTGTTALVATKQFEQLQAAIHTDLGALEKSVSALEKSLTSLSEVV
                     LQNRRGLDLLFLKEGGLCAALKEECCFYADHTGVVRDSMAKLRERLNQRQKLFESGQG
                     WFEGLFNRSPWFTTLISTIMGPLIILLLILLFGPCILNRLVQFVKDRISVVQALVLTQ
                     QYHQLKSIDPEEVESRE"
ORIGIN      
        1 cgcccccgcc ccttgttaat ttccatgatc ctgaaatgtc aaagtttact aatagcccct
       61 ctctccaagc tcacttacag gccctccaag cagtacaacg agaggtctgg aagccactgg
      121 ccgctgccta tcaggaccag ctggaccagc cagtgatacc acaccccttc cgtgtcggcg
      181 acaccgtgtg ggtacgccgg caccagacta agaacttgga acctcgctgg aaaggaccct
      241 acaccgtcct gctgaccacc cccaccgctc tcaaagtaga cggcatcgct gcgtggatcc
      301 acgccgctca cgtaaaagcg gcgacaaccc ctccggccgg aacagcatca ggaccgacat
      361 ggaaggtcca gcgttctcaa aaccccttaa agataagatt aacccgtggg gccccctaat
      421 aatcctgggg atcttaataa gggcaggagt atcagtacaa catgacagcc ctcatcaggt
      481 cttcaatgtt acttggagag ttaccaactt aatgacagga caaacagcta atgctacctc
      541 cctcctgggg acaatgaccg atgcctttcc taaactgtac tttgacttgt gcgatttaat
      601 aggggacgac tgggatgaga ctggactcgg gtgtcgcact cccgggggaa gaaaaagggc
      661 aagaacattt gacttctatg tttgccccgg gcatactgta ccaacagggt gtggagggcc
      721 gagagagggc tactgtggca aatggggctg tgagaccact ggacaggcat actggaagcc
      781 atcatcatca tgggacctaa tttcccttaa gcgaggaaac acccctcaga atcagggccc
      841 ctgttatgat tcctcagcgg tctccagtga catcaagggc gccacaccgg ggggtcgatg
      901 caatccccta gtcctggaat tcactgacgc gggcaaaaag gccagctggg atggccccaa
      961 agtatgggga ctaagactgt accgatccac agggaccgac ccggtgaccc ggttctcttt
     1021 gacccgccag gtcctcaata tagggccccg cgtccccatt gggcctaatc ccgtgatcac
     1081 tgaccagtta cccccctccc gacccgtgca gatcatgctc cccaggcctc ctcagcctcc
     1141 tcctccaggc gcagcctcta tagtccctga gactgcccca ccttctcaac aacctgggac
     1201 gggagacagg ctgctaaacc tggtagatgg agcctaccaa gctctcaacc tcaccagtcc
     1261 cgacaaaacc caagagtgct ggttgtgtct ggtagcggga cccccctact acgaaggggt
     1321 tgccgtccta ggtacttatt ccaaccatac ctctgcccca gctaactgct ccgtggcctc
     1381 ccaacacaag ctgaccctgt ccgaagtgac cggacaggga ctctgcgtag gagcagttcc
     1441 caaaacccat caggccctgt gtaataccac ccagaagacg agcgacgggt cctactatct
     1501 ggctgctccc gccgggacca tttgggcttg caacaccggg ctcactccct gcctatctac
     1561 cactgtactc gacctcacca ccgattactg tgtcctggtt gagctctggc caaaggtgac
     1621 ctaccactcc cctggttatg tttatggcca gtttgagaga aaaaccaaat ataaaagaga
     1681 gccggtgtca ttaactctgg ccctgctgtt gggaggactt actatgggcg gcatagctgc
     1741 aggagtagga accgggacta cagccctagt ggccaccaaa caattcgagc agctccaggc
     1801 agccatacat acagaccttg gggctttaga aaagtcagtc agtgccctag aaaagtctct
     1861 gacctcgttg tctgaggtgg tcctacagaa ccggagggga ttagatctac tgttcctaaa
     1921 agaaggagga ttatgtgctg ccctaaaaga agaatgctgt ttctacgcgg accacactgg
     1981 cgtagtaaga gatagcatgg caaagctaag agaaaggttg aaccagagac aaaaattgtt
     2041 cgaatcagga caagggtggt ttgagggact gtttaacagg tccccatggt tcacgacctt
     2101 aatatccacc attatgggcc ccttgataat acttttatta atcctactct tcggaccctg
     2161 tattctcaac cgcttggtcc agtttgtaaa agacagaatt tcggtagtgc aggccctggt
     2221 tttgacccaa cagtatcacc aactcaaatc aatagatcca gaagaagtgg aatcacgtga
     2281 ataa
//
