LOCUS       XM_036154456            4452 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus predicted gene, 53473 (Gm53473), mRNA.
ACCESSION   XM_036154456
VERSION     XM_036154456.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000074.7) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 48% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..4452
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="8"
     gene            1..4452
                     /gene="Gm53473"
                     /note="predicted gene, 53473; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3 long
                     SRA reads, and 29% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:118567631"
                     /db_xref="MGI:MGI:6721999"
     CDS             1..3906
                     /gene="Gm53473"
                     /codon_start=1
                     /product="cell surface glycoprotein 1-like"
                     /protein_id="XP_036010349.1"
                     /db_xref="GeneID:118567631"
                     /db_xref="MGI:MGI:6721999"
                     /translation="MSPVRGNKPPIFRTFPRKHRIHVLEAPGDIEPTHSTGAADSRAP
                     ADAEPNSSTCAAVNGAPAGVEPTTSSQCAPDCEDPAVIEPTHSTCAADSRAPADAEPN
                     SSTCAAVNGAPADVEPTTSSQCAPDCEDPAVIEPTHSTCAADSRAPADAEPNSSTCAA
                     VNGATADVEPTTSSQCAPDCEDPAVIEPTHSNCAADSRAPADAEPNSSTCANVNGAPA
                     DVEPTTSSQCAPDCEDPAVIEPTHSTCAADSRAPADAEPNSSTCAAVNGAPAGVEPTT
                     SSQCAPDCEDPAVIEPTHSTCAADSRAPADAEPNSSTCASVNGAPANVEPTTSSQCAP
                     DCEDPAVIEPTHSTCDADSRAPADAEPNSSTCASVNGAPADVEPTTTSQCAPDCEDPA
                     VIEPTHSTCAADSRAPADAEPNSSTCAAVNGAPADVEPTTSQLVPDCGAPADFEPTTS
                     QCAPDCEDPAVIEPTHSNCAADSRAPADAEPNSSTCAAVNGAPADDEPTTSSQCAPDC
                     EDPAVIEPTHSTCAADSRAPADAEPNSSTCVAVNGATADVEPTTSSQCAPDCEDPAVI
                     EPTHSTCAADSRAPADAEPNSSTCAAVNGAPANNEPTTSSQCAPDCEDPAVIEPTHST
                     CAADSRAPADAEPNSSTCAAVNGATADVEPTTSQLVPDSGAPADVDPTTSQCAPDCED
                     PAVIEPTHSTCAADSRAPAHIEPTPSQLAPDRGAPADVEPTHSTCAADSRIPADIEPS
                     PSQCAPDSPAPSDIGEEPSPVADPDEDIAEDFYDALESSDHTGHSRSTVQVPGFLWEP
                     DMLLLPVMPLMWFLTFLLSTMMWIRNGIRKCATKKMAKDLPPREKINPVRGNKPPIFR
                     TFPRKHRIHVLEAPGDIEPTDSTCAADSRAPADAEPNSSTCAAVNGAPVGVEPTTSSQ
                     CAPDCEDPAVIEPTHSTCAADSRAPADAEPNSSTCAALNGATADVEPTTSQLVPDSGA
                     PADVEPTTSQCAPDCEYPAVIEPTHSTCAADSRAPAGAEPNCSTCAAVNGAPAGVEPS
                     TSSQCAPYCEDPAVIEPTHSTCAADRRAPADAEPNSSTCAAVNGAPADVEPTTSSQCA
                     PDCEDPAVIEPTHSTCAADRRAPADAEPNSSTCAAVNGAPADVEPTTSQLVPDSGAPA
                     DVEPTLPSVLLTVRILQSLSQLIPPVLLTAGLLLMLSQILPPVLLSMGLLLLMSQLLL
                     PSLLLTVRILQSLSQLIPPVLLTAGLLLMLSQILPPVLLSMGLLLMLSQLLHNLFLTV
                     VLLLMLSQLLPSVLLTVRILQSLSQLIPPVLLTAGLLLT"
ORIGIN      
        1 atgagtccgg tgcgaggaaa taaaccacct attttccgta cctttcctcg gaagcataga
       61 attcatgtgc ttgaggctcc tggtgacatt gagccaactc attccaccgg tgctgctgac
      121 agcagggctc ctgctgatgc tgagccaaat tcttctacct gtgctgctgt caatggggct
      181 cctgctggtg ttgagccaac tacttcttcc cagtgtgctc ctgactgtga ggatcctgca
      241 gtcattgagc caactcattc cacctgtgct gctgacagca gggctcctgc tgatgctgag
      301 ccaaattctt ccacctgtgc tgctgtcaat ggggctcctg ctgatgttga gccaactact
      361 tcttcccagt gtgctcctga ctgtgaggat cctgcagtca ttgagccaac tcattccacc
      421 tgtgctgctg acagcagggc tcctgctgat gctgagccaa attcttccac ctgtgctgct
      481 gtcaatgggg ctactgctga tgttgagcca actacttctt cccagtgtgc tcctgactgt
      541 gaggatcctg cagtcattga gccaactcat tccaactgtg ctgctgacag cagggctcct
      601 gctgatgctg agccaaattc ttccacctgt gctaatgtca atggggctcc tgctgatgtt
      661 gagccaacta cttcttccca gtgtgctcct gactgtgagg atcctgcagt cattgagcca
      721 actcattcca cctgtgctgc tgacagcagg gctcctgctg atgctgagcc aaattcttct
      781 acctgtgctg ctgtcaatgg ggctcctgct ggtgttgagc caactacttc ttcccagtgt
      841 gctcctgact gtgaggatcc tgcagtcatt gagccaactc attccacctg tgctgctgac
      901 agcagggctc ctgctgatgc tgagccaaat tcttccacct gtgcttctgt caatggggct
      961 cctgctaatg ttgagccaac tacttcttcc cagtgtgctc ctgactgtga ggatcctgca
     1021 gtcattgagc caactcattc cacctgtgat gctgacagca gggctcctgc tgatgctgag
     1081 ccaaattctt ccacctgtgc ttctgtcaat ggggctcctg ctgatgttga gccaactact
     1141 acttcccagt gtgctcctga ctgtgaggat cctgcagtca ttgagccaac tcattccacc
     1201 tgtgctgctg acagcagggc tcctgctgat gctgagccaa attcttccac ctgtgctgct
     1261 gtcaatgggg ctcctgctga tgttgagcca actacttcac aacttgttcc tgactgtggt
     1321 gctcctgctg attttgagcc aactacttcc cagtgtgctc ctgactgtga ggatcctgca
     1381 gtcattgagc caactcattc caactgtgct gctgacagca gggctcctgc tgatgctgag
     1441 ccaaattctt ccacctgtgc tgctgtcaat ggggctcctg ctgatgatga gccaactact
     1501 tcttcccagt gtgctcctga ctgtgaggat cctgcagtca ttgagccaac tcattccacc
     1561 tgtgctgctg acagcagggc tcctgctgat gctgagccaa attcttccac ctgtgttgct
     1621 gtcaatgggg ctactgctga tgttgagcca actacttctt cccagtgtgc tcctgactgt
     1681 gaggatcctg cagtcattga gccaactcat tccacctgtg ctgctgacag cagggctcct
     1741 gctgatgctg agccaaattc ttccacctgt gctgctgtca atggggctcc tgctaataat
     1801 gagccaacta cttcttccca gtgtgctcct gactgtgagg atcctgcagt cattgagcca
     1861 actcattcca cctgtgctgc tgacagcagg gctcctgctg atgctgagcc aaattcttcc
     1921 acctgtgctg ctgtcaatgg ggctactgct gatgttgagc caactacttc acaacttgtt
     1981 cctgacagtg gtgctcctgc tgatgttgat ccaactactt cccagtgtgc tcctgactgt
     2041 gaggatcctg cagtcattga gccaactcat tccacctgtg ctgctgacag cagggctcct
     2101 gctcacatag aaccaactcc ttcacaactt gctcctgaca ggggtgctcc tgctgatgtt
     2161 gagccgactc attccacctg tgctgctgac tccaggattc ctgctgacat agaaccaagt
     2221 ccttcacaat gtgctcctga cagtcctgct ccttctgata ttggtgagga acccagtcct
     2281 gttgctgacc cagatgaaga tatagctgag gacttttatg acgctttaga gtcatctgat
     2341 cacactggcc atagcaggtc cactgtccag gtacctggtt ttctttggga accagatatg
     2401 ctactgctgc cggtaatgcc cttgatgtgg tttcttacat tcctgttatc aacgatgatg
     2461 tggattagaa atggaattcg caagtgtgct acgaagaaaa tggccaagga cctccctcca
     2521 agagaaaaga taaacccggt gcgaggaaat aaaccaccta ttttccgtac ctttcctcgg
     2581 aagcatagaa ttcatgtgct tgaggctcct ggtgacattg agccaactga ttccacctgt
     2641 gctgctgaca gcagggctcc tgctgatgct gagccaaatt cttccacctg tgctgctgtc
     2701 aatggggctc ctgttggtgt tgagccaact acttcttccc agtgtgctcc tgactgtgag
     2761 gatcctgcag tcattgagcc aactcattcc acctgtgctg ctgacagcag ggctcctgct
     2821 gatgctgagc caaattcttc cacctgtgct gctctcaatg gggctactgc tgatgttgag
     2881 ccaactactt cacaacttgt tcctgacagt ggtgctcctg ctgatgttga gccaactact
     2941 tcccagtgtg ctcctgactg tgagtatcct gcagtcattg agccaactca ttccacctgt
     3001 gctgctgaca gcagggctcc tgctggtgct gagccaaatt gttccacctg tgctgctgtc
     3061 aatggggctc ctgctggtgt tgagccaagt acttcttccc agtgtgctcc ttactgtgag
     3121 gatcctgcag tcattgagcc aactcattcc acctgtgctg ctgacagaag ggctcctgct
     3181 gatgctgagc caaattcttc cacctgtgct gctgtcaatg gggctcctgc tgatgttgag
     3241 ccaactactt cttcccagtg tgctcctgac tgtgaggatc ctgcagtcat tgagccaact
     3301 cattccacct gtgctgctga cagaagggct cctgctgatg ctgagccaaa ttcttccacc
     3361 tgtgctgctg tcaatggggc tcctgctgat gttgagccaa ctacttcaca acttgttcct
     3421 gacagcggtg ctcctgctga tgttgagcca acacttccca gtgtgctcct gactgtgagg
     3481 atcctgcagt cattgagcca actcattcca cctgtgctgc tgacagcagg gctcctgctg
     3541 atgctgagcc aaattcttcc acctgtgctg ctgtcaatgg ggctcctgct gctgatgagc
     3601 caactacttc ttcccagttt gctcctgact gtgaggatcc tgcagtcatt gagccaactc
     3661 attccacctg tgctgctgac agcagggctc ctgctgatgc tgagccaaat tcttccacct
     3721 gtgctgctgt caatggggct cctgctgatg ttgagccaac tacttcacaa cttgttcctg
     3781 acagtggtgc tcctgctgat gttgagccaa ctacttccca gtgtgctcct gactgtgagg
     3841 atcctgcagt cattgagcca actcattcca cctgtgttgc tgacagcagg gctcctgctc
     3901 acatagaacc aactccttca taacttgctc ctgacagggg tgctcctgct gatgttgagc
     3961 cgactcattc cacctgtgct gctgacacca ggattcctgc tggcatagaa ccaagtcctt
     4021 cacaatgtgc tcctgacagt cctactcctt ctgatattgg tgaggaaccc agtcctgttg
     4081 ctgacccaga tgaagatata gctgaggatt tttatgacgc tttagagtca tctgatcaca
     4141 ctggccatag cgggtccact gtccaggtac ctggttttct ttgggaacca gatatgctac
     4201 tactgccggt aatgcccttg atgtggtttc ttacattcct gttatcaatg atgatgtgga
     4261 ttagaaatgg aattcccaag tgtgctacga agaaaatggc caaggaccac cctccaagag
     4321 aaaagataaa cccgatgccg ctggagctga acactccaac acacactgat atatgaagac
     4381 aaagtgtgtg aggaggaagt ttattatgta tatgtaaata taaaaatttt atatataaat
     4441 aaaatgtttt at
//
