LOCUS       XM_030251621            2032 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus predicted gene, 52481 (Gm52481), mRNA.
ACCESSION   XM_030251621
VERSION     XM_030251621.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000087.8) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2032
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="Y"
     gene            1..2032
                     /gene="Gm52481"
                     /note="predicted gene, 52481; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 118
                     long SRA reads, and 97% coverage of the annotated genomic
                     feature by RNAseq alignments, including 19 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:115489304"
                     /db_xref="MGI:MGI:6366692"
     CDS             185..1300
                     /gene="Gm52481"
                     /codon_start=1
                     /product="collagen alpha-2(I) chain-like"
                     /protein_id="XP_030107481.1"
                     /db_xref="GeneID:115489304"
                     /db_xref="MGI:MGI:6366692"
                     /translation="MEEGRRKNQDRGTDRRRDPSCAGHGRGQAGRDGRREKGEPGQGD
                     SGAERPRLRGTRTRAWSLGGRKWRKDGDKETRGQRDTRKPGWCVSVGCRLGLGPRGEE
                     GSRSRENRDRGTDRRRDPSCAGHGRDQAGRDGRRRENQDRGTGGQRDPNYTGHGLGLG
                     PWVEEGRRREVDRQRPGDRETHGSRDGASRSDADSGLVPGEQKEAGRTRTGGQGDRGT
                     ERPRLRGTRTRAWSPGRRREKEGEGRTRTGGRTDRRRDLSCAGHGRGQSGRDGRRKME
                     KGEPGQGDRQTQRAELRGPRQRPGRPGWKKEAGEGRRREEKGGEGRAGGCGTRGSRDG
                     SLDGGRRRQAAPGGREEEEEEEEERDLESDRGTERET"
ORIGIN      
        1 ggacagagag acgcacggaa gccgggatgg tgcgtctcgg tcggatgcag actcgggctt
       61 ggtccccggg gagaagaagg aagcaggaag cagggagaac caggacaggg ggacaggggg
      121 acagagagac ccgagctgcg cgggccacgg cagagaccag gcaggccggg atggaagaag
      181 gaagatggaa gaagggagaa ggaagaacca ggacaggggg acagacagac gcagagaccc
      241 gagctgcgcg ggccatggca gaggccaggc aggccgggat ggaagaaggg agaagggaga
      301 accaggacag ggggacagtg gggcagagag acccagactg cgcgggacac ggactcgggc
      361 ttggtccctg ggtggaagaa agtggaggaa ggatggagac aaagagaccc ggggacagag
      421 agacacacgg aagccgggat ggtgcgtctc ggtcggatgc agactcgggc ttggtccccg
      481 gggagaagaa ggaagcagga gcagggagaa ccgggacagg gggacagaca gacgcagaga
      541 cccgagctgc gcgggccacg gcagagacca ggcaggccgg gatggaagaa gaagggagaa
      601 ccaggacagg gggacagggg gacagagaga cccgaactac acgggacacg gactcgggct
      661 tggtccctgg gtggaagaag gaaggagaag ggaggttgac agacagagac ccggggacag
      721 agagacacac ggaagccggg atggtgcgtc tcggtcggat gcagactcgg gcttggtccc
      781 cggggagcag aaggaagcag ggagaaccag gacaggggga cagggggata gggggacaga
      841 gagacccaga ctgcgcggga cacggactcg ggcttggtcc ccggggagaa gaagggagaa
      901 ggaaggagaa gggagaacca ggacaggggg acggacagac agacgcagag acctgagctg
      961 cgcgggccac ggcagaggcc agtcaggccg ggatggaaga aggaagatgg agaagggaga
     1021 accaggacag ggggacagac agacgcagag agccgagctg cgcgggccac ggcagaggcc
     1081 aggcaggccg ggatggaaga aggaagcagg agaaggaagg agaagggagg agaagggagg
     1141 agaagggaga gccgggggct gcgggactcg tggaagccgg gatgggtccc tcgatggcgg
     1201 acgccgacgc caggcagccc cgggtggaag ggaggaggag gaggaggagg aggaggagag
     1261 agacttagag tcagacagag ggacagagag agagacttag acacagagag agagagacag
     1321 agagaggctc tgtccctgaa cttctacagg tacaacctgg agcggcgggc gcggacctga
     1381 acccccgtct gcccggggac gccgccgaca cggccacacc gctcgtctgg aaccagggct
     1441 ggccttcggg tcccagatcc gtccccacga ggcagagaac cgggggtgca cttgcgtgtt
     1501 tttcgccacc gggtggcccc ggagatcggc gctgggccct agcctagacg cactacagct
     1561 cccatgagcg cctgggcccg acttcctgtc caaaatggag gcacttcctg tatctcacag
     1621 agtacaacct cccggggacc gaccgatgga aaacgcgacc gcctcgccgg gtcggatccg
     1681 ccagcctggc cggcttcccc tcaccctggc cgggatgaag caggcagatc cgaccccttg
     1741 gaggaagttt tttttttttt tttcccggcg tgctctctgt cgccacccgg tggtgacaga
     1801 ggagaatgcg gtggtcgtga cctttcgatt ttcttttttt caaaggacac ttgtttttgg
     1861 tttccgtgag cgttgattat ttttgaaagc atctacgtgc acgttcgttt ttcttttatt
     1921 ctcgttgatg gctcaccact ctttgcatat gtgtgaaccc agaatatgtc aacctatata
     1981 tacattaaac atgtgaaagt gtgtgtgtgt ttgtgtgtgt gtgtgtgtgt gt
//
