LOCUS       XM_036157718            1303 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus predicted gene, 52009 (Gm52009), mRNA.
ACCESSION   XM_036157718
VERSION     XM_036157718.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000078.7) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 5% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1303
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="12"
     gene            1..1303
                     /gene="Gm52009"
                     /note="predicted gene, 52009; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 36 long SRA reads, and 96% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:115488020"
                     /db_xref="MGI:MGI:6365976"
     CDS             1..819
                     /gene="Gm52009"
                     /codon_start=1
                     /product="apical junction component 1 homolog"
                     /protein_id="XP_036013611.1"
                     /db_xref="GeneID:115488020"
                     /db_xref="MGI:MGI:6365976"
                     /translation="MVADLGSREKESGRPTRGEPKKRGPRRKARPREEERAEAGERGR
                     RAGRPAQTRRSGSRYVSLNTPRRRERRRAAGAGSPRTLRPPDRPGGALRRRRPCRRSS
                     KAQTSYTLTGAARQTPPLLRAPGSVSAHKGSPWRRRTSADWWRAGWSFVQTHARRSLA
                     GRVSRASASAVRLARWAAPPPFPSLPAPRPAPDPLFVDGSTRSQGSARSAPRVPRAWP
                     PPQFPGLLAPGPAPRVLAAPPRAGARVSFVILALLTHSGAVNASPGHGRCLHLL"
ORIGIN      
        1 atggtggcag acttgggaag cagagagaag gagagtggaa gaccgacgcg gggtgaacca
       61 aagaagaggg gaccgcggag aaaggcaagg ccacgggagg aagagagagc ggaagcaggg
      121 gagcgtgggc ggagggcggg acggccagct cagacccgcc gctccggctc tcggtatgtg
      181 tcactcaaca cgccgcggcg tcgtgagcgc cgaagggcgg ccggcgcagg aagcccgagg
      241 accctgaggc cgcccgaccg ccccgggggt gctctgcgcc gacgccgccc atgccgcaga
      301 agctcgaagg cgcaaaccag ctacacactt accggcgccg caaggcagac cccgccactc
      361 cttcgggcac ccggatcggt cagcgcccac aaagggtcgc catggcgccg ccgcacgagc
      421 gccgattggt ggcgtgcggg gtggagcttt gttcaaaccc acgcaaggcg gagcctcgcc
      481 ggccgcgtct cccgcgcttc ggcctcagcc gttaggctcg cgcgctgggc cgccccgccc
      541 ccgttcccaa gtctccccgc gccccgcccc gcccccgatc ccttgtttgt cgacggctcg
      601 acccgttccc agggttccgc gcgctccgct cccagggttc cgcgcgcctg gccaccgccc
      661 cagttcccag gtctccttgc gcctggcccc gcccccaggg tgcttgccgc gccccctcgc
      721 gccggtgccc gagtctcctt cgttatcctg gccctcctga ctcacagcgg ggcggttaat
      781 gccagccctg ggcatggccg atgtctacac cttctctgag acatagaagg gttgaacgag
      841 gctcggtggt ggcatccctg aacaggtcct ggttcgagtt ccaactgaga aaaattaaaa
      901 tataaggtcc tggtagtgca caagatctta acgaggacac caagtccgga cggcgttggt
      961 tgggggatgg agtgaggtgg gaaggtgagt ggatgcagaa tgttcagtgg ggatgccaca
     1021 ttagcacagg gagcaagctc gtttgctgga aaagactgga aactccttcc gaccgggact
     1081 tctaatgaat gagcgttcga gagaaaaacc ggtgccataa gagaaagtat acggcataca
     1141 catcacatcg tgtctttgtg gcttcgtggt tcacctaagc tcactaatgc attcccattc
     1201 ctgggcatac ttgcccttta tttgatggaa aggcatgcca tcaaactttg acctggatac
     1261 tagcatggtt tttcttttga attactatta tttttggatt tac
//
