LOCUS       NM_001040669             886 bp    mRNA    linear   ROD 07-AUG-2023
DEFINITION  Mus musculus predicted gene 5169 (Gm5169), mRNA.
ACCESSION   NM_001040669 XM_620965 XM_895446
VERSION     NM_001040669.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 886)
  AUTHORS   Harrow JL, Steward CA, Frankish A, Gilbert JG, Gonzalez JM,
            Loveland JE, Mudge J, Sheppard D, Thomas M, Trevanion S and Wilming
            LG.
  TITLE     The Vertebrate Genome Annotation browser 10 years on
  JOURNAL   Nucleic Acids Res 42 (Database issue), D771-D779 (2014)
   PUBMED   24316575
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CT954250.5.
            
            On Aug 29, 2018 this sequence version replaced NM_001040669.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC087929.1, BU962257.1 [ECO:0000332]
            RNAseq introns              :: partial sample support SAMN00849384,
                                           SAMN01164134 [ECO:0000350]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-106               CT954250.5         34841-34946         c
            107-226             CT954250.5         33242-33361         c
            227-293             CT954250.5         27622-27688         c
            294-328             CT954250.5         27048-27082         c
            329-454             CT954250.5         22500-22625         c
            455-518             CT954250.5         22124-22187         c
            519-600             CT954250.5         14028-14109         c
            601-699             CT954250.5         11483-11581         c
            700-886             CT954250.5         10978-11164         c
FEATURES             Location/Qualifiers
     source          1..886
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="X"
                     /map="X 17.78 cM"
     gene            1..886
                     /gene="Gm5169"
                     /gene_synonym="382277; Xmr"
                     /note="predicted gene 5169"
                     /db_xref="GeneID:382277"
                     /db_xref="MGI:MGI:3804938"
     exon            1..106
                     /gene="Gm5169"
                     /gene_synonym="382277; Xmr"
                     /inference="alignment:Splign:2.1.0"
     exon            107..226
                     /gene="Gm5169"
                     /gene_synonym="382277; Xmr"
                     /inference="alignment:Splign:2.1.0"
     CDS             130..768
                     /gene="Gm5169"
                     /gene_synonym="382277; Xmr"
                     /codon_start=1
                     /product="uncharacterized protein LOC382277"
                     /protein_id="NP_001035759.1"
                     /db_xref="CCDS:CCDS40894.1"
                     /db_xref="GeneID:382277"
                     /db_xref="MGI:MGI:3804938"
                     /translation="MSIKKLWVIPKDGYLLLLDYDSDEEEEQAHSEVKRPAYGKHENM
                     PPHVEADEDIRDEQDSMLDKSGENVSFSEEWQRFARSVETPMENWNLLSGEQQVRNAS
                     ELDLMEVQNPVTHDDGNANPEEVVGDTRKKINNKLCEHKCDMDIQKFNEEQEKSVNNY
                     QKEQQALNLSECSQSQTLEAIEDMHEKSMEGLMNMETNNYDMLFDVDGEETL"
     exon            227..293
                     /gene="Gm5169"
                     /gene_synonym="382277; Xmr"
                     /inference="alignment:Splign:2.1.0"
     exon            294..328
                     /gene="Gm5169"
                     /gene_synonym="382277; Xmr"
                     /inference="alignment:Splign:2.1.0"
     exon            329..454
                     /gene="Gm5169"
                     /gene_synonym="382277; Xmr"
                     /inference="alignment:Splign:2.1.0"
     exon            455..518
                     /gene="Gm5169"
                     /gene_synonym="382277; Xmr"
                     /inference="alignment:Splign:2.1.0"
     exon            519..600
                     /gene="Gm5169"
                     /gene_synonym="382277; Xmr"
                     /inference="alignment:Splign:2.1.0"
     exon            601..699
                     /gene="Gm5169"
                     /gene_synonym="382277; Xmr"
                     /inference="alignment:Splign:2.1.0"
     exon            700..886
                     /gene="Gm5169"
                     /gene_synonym="382277; Xmr"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 attgaggagt tgagcacgga agggtgcagt tgtgaaggtg ttcacctctg agataacctt
       61 taagtgataa tcggctctgc tcagggttgt tggacagtta atcgagacaa ctgagcgctt
      121 aagagaaaaa tgtctattaa gaaactgtgg gtgataccaa aggatggtta cttattactt
      181 cttgactatg attcagatga agaagaagag caggctcatt ctgaagtaaa gaggccagca
      241 tatggcaaac atgagaatat gccgcctcac gtagaagcag atgaagatat aagagatgaa
      301 caagacagta tgttggataa atctggagaa aatgtaagtt tctcagagga atggcagcgt
      361 tttgcacgtt ctgtagagac accaatggaa aactggaatt tgttaagtgg tgaacagcaa
      421 gttaggaatg cttcagaatt ggaccttatg gaagtacaga atccagtaac tcatgatgat
      481 gggaatgcaa atcctgaaga agtagttgga gatacacgaa agaagatcaa caacaaattg
      541 tgtgagcata agtgtgatat ggatatacag aaattcaatg aagaacaaga aaaatcagtg
      601 aacaattatc aaaaagaaca acaagcatta aatctgtccg aatgtagtca gagtcagacc
      661 ctggaagcaa ttgaagacat gcatgagaag tccatggagg gtttgatgaa catggagacc
      721 aacaactacg atatgctttt tgatgtagat ggtgaagaga cattatgaag catactctga
      781 agtactcttc tcctttccca tcttcagact aatgaagcat acatatttct cacttgctgg
      841 tacatttgta accaaataaa aaattcacta acatttttgt ctccta
//
