LOCUS       XM_036155438             875 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus predicted pseudogene 5161 (Gm5161), mRNA.
ACCESSION   XM_036155438
VERSION     XM_036155438.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000075.7) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..875
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="9"
     gene            1..875
                     /gene="Gm5161"
                     /note="predicted pseudogene 5161; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins, and 74% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:382099"
                     /db_xref="MGI:MGI:3648529"
     CDS             1..846
                     /gene="Gm5161"
                     /codon_start=1
                     /product="U1 small nuclear ribonucleoprotein A-like"
                     /protein_id="XP_036011331.1"
                     /db_xref="GeneID:382099"
                     /db_xref="MGI:MGI:3648529"
                     /translation="MAVPETRPNHTIYINSLNEKIKKDELKKSPYAIFSQFGQILDIL
                     VSQSLKMRGQSFVIFKEVSSTINALRSMQGFPFYGKPMHIQYAKTDSDIIAKMKGTFV
                     ERDRKREKRKPKSQEKPAVKKGCSGWGSAPVVGAVQPVPGMPPMPQAPRVMHHMPGQP
                     PYMRPPGMILPPGLPPGQIPSRAMPPQQLIPGQMPHAQPLSENPPNHILFLTNLPEET
                     NELMLSMLFTQFPGFKEVRLVPGRHDIDFVEFDNEVQAGAARDVLQGFKITQNNAMKI
                     SFAKK"
ORIGIN      
        1 atggcagttc ccgagacccg tcccaaccac actatttata tcaacagtct caacgagaag
       61 atcaagaaag atgagctcaa gaagtccccg tatgccatct tctcccagtt tggccagatc
      121 ctggatatcc tggtgtctca gagcctgaag atgaggggcc agtccttcgt catcttcaag
      181 gaggtcagca gcaccatcaa cgccctgcgc tccatgcagg gcttcccctt ctacggcaag
      241 cccatgcata tccagtacgc aaagactgac tcggacatca ttgccaagat gaagggcacc
      301 tttgtggaga gagatcgcaa acgagagaag aggaagccca agagtcagga gaaacctgct
      361 gtcaaaaaag gctgttcagg gtggggcagt gcccccgtgg tgggtgctgt ccagcctgta
      421 ccgggcatgc caccgatgcc tcaggcaccc cgtgttatgc accacatgcc aggacagcct
      481 ccctacatgc gaccacctgg catgatcctg ccaccaggcc tccctcctgg ccagatcccc
      541 tctagggcca tgcccccaca gcagctcata cctgggcaga tgccgcatgc gcagcctctc
      601 tccgagaatc cacccaatca catcctgttc ctcaccaacc tgcctgagga gaccaacgag
      661 ctcatgctct ccatgctttt cacccagttc cctggcttca aggaggtgcg tctggtccct
      721 gggcgccatg acatcgactt cgtggagttt gacaatgaag tgcaggctgg agcagcacga
      781 gatgtcctgc aaggctttaa gatcacacag aacaatgcta tgaagatctc ttttgccaag
      841 aagtagcacc ttcccctatg gagtacccca gtccc
//
