LOCUS       XM_036162138             432 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus predicted pseudogene 4995 (Gm4995), mRNA.
ACCESSION   XM_036162138
VERSION     XM_036162138.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000086.8) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 5% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..432
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="X"
     gene            1..432
                     /gene="Gm4995"
                     /note="predicted pseudogene 4995; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins, and 52% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:105243727"
                     /db_xref="MGI:MGI:3643395"
     CDS             1..432
                     /gene="Gm4995"
                     /codon_start=1
                     /product="coiled-coil-helix-coiled-coil-helix
                     domain-containing protein 2-like"
                     /protein_id="XP_036018031.1"
                     /db_xref="GeneID:105243727"
                     /db_xref="MGI:MGI:3643395"
                     /translation="MPRGSQSWAPQMRAAPRRAPAAQPPAAVATSAVGSPAAEPRQPG
                     LMAHLATTAAGVAVASAVGHTQGHAITGGFSRGCNAQPAKPDITYQEPQGAQLQNQQS
                     FGPCSLEIKQFLECAQNQSDAKLCEGFKEVLRQRRAANGFI"
ORIGIN      
        1 atgccgcgtg gaagtcaaag ctgggcccct cagatgaggg ctgctcccag aagagcacct
       61 gcagctcagc ctccagcagc agttgcaaca tctgcagttg gctcacctgc cgctgagccc
      121 cggcagcccg gcctgatggc ccacctggct accactgcgg ccggtgtggc tgtggcctct
      181 gcagtggggc acacccaggg tcacgccatc actgggggct tcagcagagg ctgtaatgct
      241 cagcctgcaa agcccgacat cacttaccag gagcctcagg gagcccagct gcagaaccag
      301 cagtcttttg gaccttgctc tctagagatc aagcagtttc tggagtgtgc tcagaaccag
      361 agcgatgcca agctctgtga gggcttcaaa gaggtgctgc ggcagcgcag ggctgcaaat
      421 ggtttcatct aa
//
