LOCUS       XM_036156128            1458 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus predicted gene, 49817 (Gm49817), mRNA.
ACCESSION   XM_036156128
VERSION     XM_036156128.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000076.7) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio            :: 31% of CDS bases
            frameshifts          :: corrected 1 indel
            internal stop codons :: corrected 4 genomic stop codon
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-39                AC115970.8         27461-27499
            40-126              AC115970.8         27595-27681
            127-573             AC115970.8         58232-58678
            574-655             AC115970.8         73278-73359
            656-733             AC115970.8         73462-73539
            734-780             AC115970.8         73892-73938
            781-900             AC115970.8         74735-74854
            901-974             AC115970.8         78344-78417
            975-1058            AC115970.8         89521-89604
            1059-1173           AC115970.8         94824-94938
            1174-1230           AC115970.8         95324-95380
            1231-1231           "N"                1-1
            1232-1261           AC115970.8         95381-95410
            1262-1362           AC160864.9         4084-4184
            1363-1458           AC160864.9         5380-5475
FEATURES             Location/Qualifiers
     source          1..1458
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="10"
     gene            1..1458
                     /gene="Gm49817"
                     /note="predicted gene, 49817; The sequence of the model
                     RefSeq transcript was modified relative to its source
                     genomic sequence to represent the inferred CDS: inserted 1
                     base in 1 codon; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 3 Proteins"
                     /db_xref="GeneID:118567780"
                     /db_xref="MGI:MGI:6270484"
     CDS             1..1458
                     /gene="Gm49817"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon;
                     substituted 4 bases at 4 genomic stop codons"
                     /codon_start=1
                     /transl_except=(pos:403..405,aa:OTHER)
                     /transl_except=(pos:1147..1149,aa:OTHER)
                     /transl_except=(pos:1171..1173,aa:OTHER)
                     /transl_except=(pos:1246..1248,aa:OTHER)
                     /product="LOW QUALITY PROTEIN: pleckstrin homology
                     domain-containing family G member 7"
                     /protein_id="XP_036012021.1"
                     /db_xref="GeneID:118567780"
                     /db_xref="MGI:MGI:6270484"
                     /translation="MTPSLTKAKVITSVYHRQRSAVDGLLFVSVKKWPLEQLPRGEYL
                     LKKHFESQGNLLQFDQQASGGMFIFPTLRRWRGSGWEVSHSLLQQKDSLNMPIRGSWR
                     DPADSSSCHPKSLPRSPKDSFHLLSPLRPQTWXPSNPEGAINTANKIWPQAKPSEEDG
                     IAAHEPSSQVFLQGGKSHIAQPCHATPKDSQVSDYSFRNGWELSMASRARPVRGSVYV
                     EQGRERSKRMSDPESCPSSLVITDFLHFASFITISRNRRGALTMTRKPPSGQMALGEQ
                     QETAWELFTSECTYFLDHLLVLQMIFRNILKYLSIHDDLLDVGVFGNSWGLRGGIRSN
                     AEKIIIHSIKEKVEKSTGKDLEGNVSWLDNFQKFRHPQEIIVWPLLWDXDKRIFVPXG
                     LKNHIFKEHQTENHLSWTXRNLLXEGKLTSSENTRSLDVYLFLFDDFLLITKIRLNKK
                     IHAIKLGGLMCPSLTPDLQAIVKSTMPDQPIPLDR"
ORIGIN      
        1 atgacacctt ctcttacaaa agcaaaagta ataacaagcg tttatcaccg ccagaggagt
       61 gcagtggatg ggctgctgtt tgtttcagtg aagaagtggc ctttggagca actcccaaga
      121 ggagagtacc tattgaaaaa acattttgag agtcagggga acctactcca gtttgaccag
      181 caagcctctg gtggtatgtt catctttcct accctgagaa gatggagagg gagtggttgg
      241 gaggtctcac actcattgct tcagcaaaaa gactccttga acatgcccat cagaggaagc
      301 tggagggatc ctgcagactc ctcaagttgc catcccaaga gtctacctag aagtccaaag
      361 gattcttttc acttactgtc acccttgcga ccccaaacat ggtagccttc aaatcctgaa
      421 ggagccatca atacagccaa caaaatctgg ccacaagcaa agccgagtga agaggatggc
      481 attgctgccc atgagcccag cagtcaggta ttcctccagg gaggaaagag ccacattgct
      541 cagccttgcc atgcaacacc taaagattct caggtgtcag actacagctt cagaaatgga
      601 tgggagctgt ccatggcttc aagggcccgg cctgttagag gttcagttta cgttgagcaa
      661 ggacgggaac gatctaagcg catgtctgac ccagagagct gcccatcctc cctggtgatt
      721 acagacttcc tccattttgc ttcatttatt acgatatcca ggaacaggag aggagctctg
      781 accatgacaa gaaaaccgcc ctctggtcag atggccttgg gagagcagca agagactgca
      841 tgggaacttt tcaccagcga atgcacttat ttcttggacc atttattggt tcttcagatg
      901 atcttcagga atatactgaa atacctaagc attcatgacg atctattgga tgtgggtgtt
      961 tttggaaact cttggggact tagaggtggt atcagaagta atgctgagaa gattataatc
     1021 cactccatta aggaaaaggt agagaagtca accggtaagg atcttgaagg aaacgtgagc
     1081 tggcttgaca atttccaaaa gtttagacat ccacaggaga ttatagtatg gcctctactt
     1141 tgggattagg acaaaaggat tttcgttcca tagggcttga agaatcacat tttcaaagaa
     1201 catcagacag aaaatcactt gtcatggaca nacaggaacc ttctctaaga agggaaatta
     1261 acttcttcag aaaacacaag gtccctggat gtctacctgt tcctctttga tgatttcctt
     1321 ttaattacaa aaattaggct caacaaaaag atacatgcta taaaactcgg aggcttaatg
     1381 tgtccttcac ttactcctga cctgcaagct atagtaaaat ccacaatgcc tgatcagccc
     1441 atcccactgg acagataa
//
