LOCUS       XM_017321256            1306 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus predicted gene, 46933 (Gm46933), mRNA.
ACCESSION   XM_017321256
VERSION     XM_017321256.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000071.7) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1306
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="5"
     gene            1..1306
                     /gene="Gm46933"
                     /note="predicted gene, 46933; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 27 long SRA reads, and 97% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:108169096"
                     /db_xref="MGI:MGI:5826570"
     CDS             1..714
                     /gene="Gm46933"
                     /codon_start=1
                     /product="ESX-1 secretion-associated protein EspI"
                     /protein_id="XP_017176745.1"
                     /db_xref="GeneID:108169096"
                     /db_xref="MGI:MGI:5826570"
                     /translation="MAQQETHVTVPVSEHVRDNPGRAGGNAEHPASGAAATFNPGFSF
                     RAQKWCPEAATFASALLLPPPTRPPSPPPRAGRRPGTRAAGERRNQAGGLPTLKPPLQ
                     EPTAPLRGLAPVGALWELAADRVPPGCFILAIPSPTCALLCTTRAGHPPPHAAFRSPC
                     RKGSALHARTHSCWRRQPARTMFPPHQPRHQAHTPDGCREPRSGGKCPLPTTTPTAPL
                     GPRTHLQPTAAAGTSRGGQ"
ORIGIN      
        1 atggctcagc aggagacgca cgttacagtc ccagtatccg aacacgttcg ggataatccg
       61 gggagggcgg ggggaaacgc cgagcacccg gcaagtggag cggcggccac cttcaacccc
      121 ggattcagtt tccgggcaca gaaatggtgc ccggaggccg ctactttcgc atctgcgttg
      181 cttctgcctc cgccgacacg gcctccttcc cctcccccac gggcggggcg acgaccggga
      241 actagggccg ccggcgagcg gaggaaccag gcgggtgggc ttcctaccct gaaaccgcct
      301 ctgcaggagc ccactgcccc gcttcgcggc ttggcgcccg ttggcgcgct ctgggagctg
      361 gcggcggaca gggtaccccc gggctgcttc atcctagcaa tccccagccc cacctgtgcc
      421 ctcctctgca ccacgcgcgc aggtcatcct cctccccacg cagccttccg ctcaccttgc
      481 aggaaaggct cggctctgca cgcacgcacg cactcttgct ggcgtaggca gccggcgaga
      541 acaatgtttc cgccgcacca accccgacac caagcgcaca caccggacgg ttgccgcgag
      601 ccgcggagcg gagggaaatg tcccctgccg accaccacac cgaccgcccc tctcggcccc
      661 cgtacacacc tccaaccaac agcggcggcg ggcacgtcgc gcggaggtca gtagtgtcgc
      721 gggatcggcc gcagcagatt ctcctccctc gaagcaaccc gaggcttcgg aatccggaga
      781 gccgcgagct cggggcccct cacagccacc tcttcccgag agcctagagc tgcaacgagc
      841 tccaagaaca cggacgtccc gccccctttg ccgccgcccc ctcttattgt tttacccctg
      901 cggaaagggc tagggaaccc cccagcacag cgccagccaa tcaggcatca gtttggagag
      961 ctagacccaa ccttctcgcg tcccactgcg gagcacgcgc agaacggcgc cgcgctcgct
     1021 cgctcgctcg ctcgggcgtc cggaaagcca gggaaccgga accggcctaa agtcggggcg
     1081 agagcccgct gatttgacgt cacaaggaag ctgcctttct cttgcagtga tgctgaagcc
     1141 tccctgtcct ctcaggtggc gcgaacaaaa aagatggctc gccgctaacc agtggctttt
     1201 acaaacggtt attcctggag cctttattcg tgataagagg gagcaaattt agtaatggtc
     1261 ctggttgctg cgttatcgga gcattaaaat gcagttttga actctg
//
