LOCUS       XM_030247050            1152 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus predicted gene, 46319 (Gm46319), mRNA.
ACCESSION   XM_030247050
VERSION     XM_030247050.2
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000078.7) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_030247050.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 10% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1152
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="12"
     gene            1..1152
                     /gene="Gm46319"
                     /note="predicted gene, 46319; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1 long
                     SRA read, and 90% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:108167961"
                     /db_xref="MGI:MGI:5825956"
     CDS             1..1140
                     /gene="Gm46319"
                     /codon_start=1
                     /product="synapsin-1-like"
                     /protein_id="XP_030102910.1"
                     /db_xref="GeneID:108167961"
                     /db_xref="MGI:MGI:5825956"
                     /translation="MQCSLLGLQRIALVLHTVEALKKPLAFSYVQRAYCWVRGLGGRE
                     EKCRVGRGSFQGGLGDNSGFAGWKWIGLLTQTSELLCSSSLQGRANKSRGKVPVTSFL
                     KPGGGRRRGRERFPGKHREGLEKQLHATRRDGARGVGLAPVAGPGRPLPGIAALRGGS
                     LRGLGCSQAGLSPESKQPPQGRNTGRDLRHPVPLLHPHSQRPTTRPAPPNPNEFRIPP
                     PAPSSTSAPPTAGRPPGSRDSPARWIPGQLRGGAGRNSSATSRLKLCCSRDGAVVTSS
                     PSRRRGPGCDPAARAAARRALQPPAPPAPRLRAPPRGPQPDPRFPVLQRLWKLRPYPH
                     SALGESAIGDFLLSLESKRSPPLPCALKSQNLWSLVRSGVIISQK"
ORIGIN      
        1 atgcagtgct cgcttcttgg tctccaaagg attgcgctgg tccttcatac agttgaagct
       61 ctcaagaaac cattagcctt ctcctatgtg cagagagctt actgttgggt tcggggcttg
      121 ggagggaggg aggaaaagtg tagagtcggg aggggctcgt ttcaaggagg cctgggggac
      181 aactcgggtt ttgctggttg gaaatggata gggctgttga cccaaacttc tgagttgctc
      241 tgctcttcgt cactgcaagg ccgagcaaac aaaagtagag ggaaagttcc tgtaacttcc
      301 ttcctgaaac ctggtggagg gcggcgtaga ggaagggaac gtttcccggg gaaacaccgg
      361 gaagggctgg aaaagcagct gcacgcaacc cgaagagatg gggcgcgggg tgtagggctg
      421 gctccggtcg caggtccggg gaggcccctt cccggcatcg ctgcgctcag gggtggctcc
      481 ctgagagggc taggctgcag ccaggccggt ctaagtcccg agtcaaaaca accacctcag
      541 gggcgcaaca ccggccgaga tctccgccac cctgtccctc tcctgcaccc ccactcccag
      601 cgtcccacga cccggcccgc gccgccgaac cccaacgaat tccggatccc ccctcccgcc
      661 ccgagctcca cgtcggcgcc ccccacggcg ggaaggccac caggctcccg cgactcacct
      721 gcacgctgga tccctgggca gctccgaggg ggcgcgggac gcaattcgag cgcgaccagc
      781 agactcaaac tttgttgctc tcgggacggc gcagtcgtca cttcctcgcc gagcaggcgg
      841 cgcggtcccg gctgtgaccc agcagctcgc gcggcggcgc gcagggctct gcagcctcct
      901 gccccgcccg cgccccggct ccgcgcgcct ccgcgcggcc cccagccaga ccctcggttc
      961 ccggtgctgc agcggctgtg gaagcttcgt ccctaccctc actctgctct tggggaaagt
     1021 gcgatcggag acttcctgct ctcccttgag tctaaaagat ccccacctct tccttgtgca
     1081 ctcaagtctc agaatctctg gagcctggtg cgttcgggtg tcatcattag ccagaagtga
     1141 ttttacaagg tg
//
