LOCUS       XM_036157129            3732 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus predicted gene, 46290 (Gm46290), transcript
            variant X3, mRNA.
ACCESSION   XM_036157129
VERSION     XM_036157129.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000077.7) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3732
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="11"
     gene            1..3732
                     /gene="Gm46290"
                     /note="predicted gene, 46290; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 12
                     long SRA reads, 1 Protein, and 73% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     26 samples with support for all annotated introns"
                     /db_xref="GeneID:108167918"
                     /db_xref="MGI:MGI:5825927"
     CDS             1132..3030
                     /gene="Gm46290"
                     /codon_start=1
                     /product="MLV-related proviral Env polyprotein-like"
                     /protein_id="XP_036013022.1"
                     /db_xref="GeneID:108167918"
                     /db_xref="MGI:MGI:5825927"
                     /translation="MEGPAFSKPLKDKINPWAPLIVLGILIRAGVSVPHDSPHQVFNV
                     TWRVTNLMTGQTANATSLLGTMTDAFPKLYFDLCDLIGDDWDETGLGCRTPGGRKRAR
                     TFDFYVCPGHTVPTGCGGPREGYCGKWGCETTGQAYWKPSSSWDLISLKRGNTPRNQG
                     PCYDSSAVSSGIQGATPGGRCNPLVLEFTDAGKKASWDGPKVWGLRLYRSTGTDPVTR
                     FSLTRQVLNIGPRIPIGPNPVITDQLPPSRPVQIMLPRPPQPSPTGAASIQPGTGDRL
                     LNLVDGAYQALNLTSPDKTQECWLCLVSGPPYYEGVAVLGTYSNHTSAPANCSVASQH
                     KLTLSEVTGQGLCVGAVPKTHQALCNTTQNTSDGSYYLAAPAGTIWACNTGLTPCLST
                     TVLNLTTDYCVLVELWPKVTYHSPGYVYGQFERKTKYKREPVSLTLALLLGGLTMGGI
                     AAGVGTGTTALVATKQFEQLQAAIHTDLGALKKSVSALEKSLTSLSEVVLQNRRGLDL
                     LFLKEGGLCAALKEECCFYADHTGVVRDSMAKLRERLNQRQKLFESGQGWFEGLFNRS
                     PWFTTLVSTIMGPLIILLLILLFGPCILNRLVQFVKDRISVVQALVLTQQYHQLKSIG
                     PEEVESRE"
ORIGIN      
        1 atagccgcta tgcctttgct accgcccatg tccatggaga aatatatagg agacgtgggt
       61 tgctcacctc agaaggcaag gagatcaaga acaagggcga aatcttggcc ttactgaaag
      121 ctctctttct gcccaaaaga ctcagtataa ttcactgccc aggacatcag aaaggcaata
      181 gtgctgaagc taaaggcaac cgaatggcgg accaggcagc ccgggaagca gccatgggga
      241 ctgacacaaa ggcctcctca cttctcatag agacctcaac cccgtacact ccagacttct
      301 tccattatac tgaaacagat ataaagaacc tacgagagtt gggagccaca tatgatagag
      361 agaaaaaata ttgggtcctg caaggtaaac ctgtgatgcc tgaccagttc acctttgaat
      421 tattagactt ccttcaccag ctcacccacc ttagctatca gaagatgagg gcacttctag
      481 acagaaaaga aagcccctat tacatgctaa ataaagataa gatcctccac gaggtggcgg
      541 aatcatgcca agcctgtgtc caagtaaatg ccagtaaagc taaggtcggt cccggggtgc
      601 gagtaagagg acatcgacca ggcacccatt gggaaattga ctttactgaa gtaaggcccg
      661 gactgtatgg gcataagtat cttctggtgt ttgtggacac gttctctggc tgggtggaag
      721 ccttcccaac caagcatgag actgccaaag ttgtgaccaa aaagcttcta gaagaaatat
      781 ttccaaggtt tggaatgccc caagtattgg ggactgataa tgggcctgcc ttcgtctccc
      841 agctcactta caggccctcc aagcagtaca acgagaggtc tggaagcctc tggccgctgc
      901 ctatcaggac caacaagacc agcctgtgat accacacccc ttccgtgtcg gcgacaccgt
      961 gtgggtacgc cggcaccaga ctaagaactt ggaacctcgc tggaaaggac cctacaccgt
     1021 cctgctgacc acccccaccg ctctcaaagt agacggcatc gctgcgtgga tccacgccgc
     1081 tcacgtaaaa gcggcgacaa cccctccggc cggaacagca tcaggaccga catggaaggt
     1141 ccagcgttct caaaacccct taaagataag attaacccgt gggcccccct gatagtcctg
     1201 gggatcttaa taagggcagg agtatcagta ccacatgaca gccctcatca ggtcttcaat
     1261 gttacttgga gagttaccaa cttaatgaca ggacaaacag ctaatgctac ctccctcctg
     1321 gggacaatga ccgatgcctt tcccaaactg tactttgact tgtgcgattt aataggggac
     1381 gactgggatg agactggact cgggtgtcgc actcccgggg gaagaaaaag ggcaagaaca
     1441 tttgacttct atgtttgccc cgggcatact gtaccaacag ggtgtggagg cccgagagag
     1501 ggctactgtg gcaaatgggg ctgtgagacc actggacagg catactggaa gccatcatca
     1561 tcatgggacc taatttccct taagcgagga aacacccctc ggaatcaggg cccctgttat
     1621 gattcctcag cggtctccag tggcatccag ggtgccacac cggggggtcg atgcaatccc
     1681 ctagtcctag aattcactga cgcgggtaaa aaggccagct gggatggccc caaagtatgg
     1741 ggactaagac tgtaccgatc cacaggaacc gacccggtga cccggttctc tttgacccgc
     1801 caggtcctca atatagggcc ccgcatcccc attgggccta atcccgtgat cactgaccag
     1861 ttacccccct cccgacccgt gcagatcatg ctccccaggc ctcctcagcc ttcccctaca
     1921 ggcgcagcct ctatacaacc tgggacggga gacagactgc tgaacctggt agatggagcc
     1981 taccaagcac tcaacctcac cagtcctgac aaaacccaag agtgctggtt gtgtctggta
     2041 tcgggacccc cctattacga aggggttgcc gtcctaggta cctactccaa ccatacctct
     2101 gccccagcta actgctccgt ggcctcccaa cacaagctga ccctgtccga agtaaccgga
     2161 cagggactct gcgtaggagc agttcccaaa acccatcagg ccctgtgtaa taccacccag
     2221 aatacaagcg acgggtccta ctatctggct gctcccgccg ggaccatttg ggcttgcaac
     2281 accgggctca ctccctgcct atctactact gtactcaacc tcaccaccga ttactgtgtc
     2341 ctggttgagc tctggccaaa ggtgacctac cactcccctg gttatgttta tggccagttt
     2401 gagagaaaaa ccaaatataa aagagagccg gtgtcattaa ctctggccct gctgttggga
     2461 ggacttacta tgggcggcat agctgcagga gtaggaacag ggactacagc cctagtggcc
     2521 accaagcaat tcgagcagct ccaggcagcc atacatacag accttggggc cttaaaaaaa
     2581 tcagtcagtg ccctagaaaa gtctctgacc tcgttgtctg aggtggtcct acagaaccgg
     2641 agaggattag atctactgtt cctaaaagaa ggaggattat gtgctgccct aaaagaagaa
     2701 tgctgtttct acgcggacca cactggcgta gtgagagata gcatggcaaa gctaagagaa
     2761 aggttaaacc agagacaaaa attgttcgaa tcaggacaag ggtggtttga gggactgttt
     2821 aacaggtccc catggttcac gaccttggta tccaccatta tgggcccctt gataatactc
     2881 ttattaatcc tactcttcgg accctgtatt ctcaaccgct tggtccagtt tgtaaaagac
     2941 agaatttcgg tggtgcaggc cctggttctg acccaacagt atcaccaact caaatcaata
     3001 ggtccagaag aagtggaatc acgtgaataa aagattttat tcagtttcca gaaagagggg
     3061 ggaatgaaag accccaccat aaggcttagc aagctagctg cagtaacgcc atttcgcaag
     3121 gcatgaaaaa gtaccagagc tgggttctca aaagttacaa ggaagttcag ttatagatta
     3181 acagttaaag atcaaggctg aatagcactg ggacaggggc cgaacaggat atcggtggtc
     3241 aagcacctgg gccccggctc agggccaaga acagatggtt ctcagataaa gcggaaccag
     3301 caacagacac agaagccccg atagacgtca gtgttagcag aactagcttc actgatttag
     3361 aaaaatagag gtgcacaatg ctctggtcac tccttgaacc tgtgtgtctg ccaatgttct
     3421 gaccagatat gtgcccattg ctgaaccttc attagactct ttccttgtac ccctccccta
     3481 cccatttctt gaaaatagac attgtttaga tctaaaaagt cccacctcag tttccccaaa
     3541 tgaccgggaa gtaccccaaa ccttattcga actaaccaac cagctcgctt ctcgcttctg
     3601 taaccacgct ttttgctccc cagccctagc cctataaaaa gggtaaaaac tccacactcg
     3661 gcgcgccagt cctccgatag actgagtcgc ccgggtaccc gtgttcccaa taaagcctct
     3721 tgctgtttac at
//
