LOCUS       XM_017313741            5780 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus predicted gene, 46139 (Gm46139), mRNA.
ACCESSION   XM_017313741
VERSION     XM_017313741.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000075.7) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..5780
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="9"
     gene            1..5780
                     /gene="Gm46139"
                     /note="predicted gene, 46139; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 39 long SRA reads, and 98% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:108167700"
                     /db_xref="MGI:MGI:5825776"
     CDS             1..654
                     /gene="Gm46139"
                     /codon_start=1
                     /product="synapsin-1-like"
                     /protein_id="XP_017169230.1"
                     /db_xref="GeneID:108167700"
                     /db_xref="MGI:MGI:5825776"
                     /translation="MRHGNPYDNSTKPTQRTAFPGPTPPQQPPDTHISPAPEREGEGR
                     ARPEDVPPLGFLRLAAGGESALPASLPSRPRTPTQTADRAFCGEPPRQRAAHLPARLP
                     DRRSQLRPEAAGSPGCTADTRAPPSGLPAPSAPLRRQQTAPPGQLRRGKRKRLETSRQ
                     SGPTGRPKGLCVCPHASEAVSPSLRRALGSSHLRTAPGRHRGCPDAVTARGLCCAAA"
ORIGIN      
        1 atgaggcacg gaaacccgta cgacaacagt acgaaaccaa cccagaggac tgcttttcct
       61 ggaccaaccc cacctcaaca gcccccggac acccacatct ctcctgctcc ggaacgggag
      121 ggggagggga gggcgcgccc cgaggatgtc ccccctctcg gcttcctcag gctggcggct
      181 ggaggtgaga gcgcccttcc tgccagccta ccgtcccggc ctcggacacc gacacagacc
      241 gccgacaggg ctttctgcgg agaaccgccg aggcagcgcg ccgcacactt gcctgcccgc
      301 ctccccgacc ggcgctcgca gctcaggcca gaggccgcgg ggtcaccggg ctgcaccgcg
      361 gacacccgag ctccgccgag cggcctcccc gccccctccg ctccgctccg ccgccagcag
      421 acggcgcccc cgggccaact tcgccgggga aagaggaagc gactagagac tagcaggcag
      481 agcggaccga ccgggagacc gaaaggactg tgcgtgtgtc cgcacgcgag cgaggccgtc
      541 tcaccttccc tccgccgagc cctcggctcc agtcacctga ggaccgcacc gggacgccac
      601 cgcggctgcc cggatgccgt taccgcacga ggcctgtgct gcgccgccgc gtagctctcg
      661 gagaggggcg gggcgcgcgc aaccggtggg cggaccgttg cgggcaggaa acccgctcca
      721 cgcccaatct aataggctcc atcgcctcct gcgcccgccc ctgacgcttc agcggaatgc
      781 gccgctccgg gattgggcga gcgggcttgt caatcaagcg cgggccctga gtggtccctg
      841 agctgagact gcgcggcctt tggacagaag gtgaggagcg ccgggcccca ccgccctgtt
      901 ctcccctagc ctcctcggtg gctgcttact ttccgcctct cccactgcta ctaaaacctg
      961 tcattcattt taaatcgctc attaatgtcg aacagcggtc ccgagttcaa cccagactac
     1021 tctggtgcct gcatctgaaa gggccgacca gctgcagatc ttagggacag ggagcgacaa
     1081 agaaaatgaa gcctcggggg aaaaatgtaa gatgtttgtt aatgaaaacc acaaccaaaa
     1141 taagctttgc gagcaacttc cgagtgccct ggcgcgtggg tagccttcat tcccggcttc
     1201 cagtcctgtg aaaaggacag ttacttctgc cctaggggtg agtatggcag tggcacagtc
     1261 ccagccacct gccaaggaag gcatcaataa atcggctctc cttcctaact tgccttacag
     1321 cgactcataa cctgcctcac tatttcccaa tcacctttgt tgcttagtgt gggtgtggca
     1381 cctaaaagaa acattctagg ttaggtaatt ttatggaaac acgagttttt gcctccagcg
     1441 tagctgcacc catataccta gattgcaaag tctattaaaa gaactgtttc acccacgccc
     1501 acctcgtgcc tagcacatca tcctcaacaa tcgaggaatt aatacagctt cctttcatct
     1561 tttaaaaatt catttttatt ctttgtgtgt tcgagtgttt ggtgtacttg tgttatactt
     1621 gtgtataatt ttgctgccca tggaggtcaa atgagggtat aggatcttct ggaactggag
     1681 ttacagatgg ttttgaacca ccctgtgggt gctgggaatc aaactcaggc cccttggaag
     1741 accagcgctc ttaatcactg aatctcagcc ccttccttta gctatactac aagccctacc
     1801 tgtaaatcct aaaaagttgt tttctgcttt taacttaatt gcatgttaat aaatacatgg
     1861 gtggcctgcc ctaggtaaaa tacaagttac ctgtagcccc ttttaatcct gagtttagtt
     1921 gagaaaagta gaacataaaa ctggggaaag gatactctgc ctattgttag tatcaaaagt
     1981 aagtaatgca aattatatat ttaaaaacat acataccgaa gagaaggggg tgatgcatgc
     2041 agaagcaggt ggatcgaggc cagcctggtc tacagattga gtgtgagttc caggacagcc
     2101 agggctaccc agagaaaccc tgtctcaaaa aacaaaaaga caaatatata tatatatata
     2161 tatatatgca gagacaggtt caagttctgc aagttcaagg ccaccctggt ttatgtagca
     2221 aatcctagga cagtcaaggc tacatagaga gatgctatct caaaagcaaa aacatacagg
     2281 cagctgaccc ccattaactc caaaggagga tatttggggt aataaaggaa ataagaatcc
     2341 tccatatctt aagacctttc ccagtaagct attgacagct tatatagtta gaatgaccta
     2401 gtttagtgtc cctatcatac agtaatgttt aggaggaaga aaatcctacc tatctgctat
     2461 caagaagtta tcacagactt gatattgaag tgtaaacatt agtgggccct actaaataaa
     2521 cttaacttct ggatttagta tagttatgct gttataggaa agagtctacc ttgtatggaa
     2581 ggtgctaaaa taggcactgc agatcttgag tccacaccag tgtcagatat tgagatttaa
     2641 accaacctgt attatttctg tgctaaccat atcaacagtt gtatgtaggg acagatgggc
     2701 attaagccac aatgagaggg aaatgtgtag taagactatt tgagcaaaaa gaagggcttg
     2761 ggagggagtt accaagtcta aagacattaa gcaattatag taatgttgat ggagcagaca
     2821 gtggctagat ttgaagcaat gtgttaggaa agctgaggtc cttagagttt atcctacaag
     2881 aaatgagaaa gagttgtttc actaaagagt tgtttttcag tactttttca gtagatcatt
     2941 ctgatgtttt ctagctcttg tttctactga gaagcaagta gcaattcaaa aaaaaaaaaa
     3001 aaccaacttt cttttatgtg tgatgggttt tgcttacatg cagttccctc agagaccaga
     3061 agagggcacc aaattctgga actgaaatac cagacagttg ttagttgcga gtgggtgcta
     3121 ggaacccaac tcgtcttcta aagaccacag tgacaggagc tgaactatga ccctgaaagg
     3181 acattgtaca gcataaaaat tttttaaaaa ggataaaact gtaggcataa tgtttttata
     3241 cactgtgtta atcaaatgct gatttctctg ccctcatacc ttgtttcagt ccagacacag
     3301 cattgtaatg cttataccaa gaatctcctg tctcaggttt gtgtgtaaaa cagttcttat
     3361 tctgtgcctt gtcaataaat gctgatcacc cagtggctgg gtagaaaaga cagtcgcacc
     3421 caccagccag aggaaggaga gagggagaga gggagattca gatcagcagc aggatggagg
     3481 aagtggagcc atgaagaagg ggtctgaaga gctgggtcat tatcacggga tggggctggg
     3541 aggtagccac attagcgcag aagtttagga tagatcactt aactatgggt aatgaggcgt
     3601 agttttaaat aaatcttgat ttctctgtga agttactggg gactagcata acataaataa
     3661 atacagtcac cagattaatt cacagccaca tttatattaa agaaatttca ttcacattaa
     3721 gccatagagc aagggggagc agggtaggcc ataccgttgt ccaatcatac tttgacataa
     3781 ggattgaaca agggagtgtc catccatcag gactggagtt ggtccctggg cctgggaaca
     3841 ggaacttgtt tgacgctgcc gacaagatgg agaagttgtc cttgagatgt ctggactcag
     3901 gcaactgttt ccttacgaca gaagctgttc agctactggg aatccccagc tcccctggga
     3961 cctgggacct ggaatttagt ttctctgtat agtcgaatgg agtctgaaaa tgaaatggag
     4021 tctgaaaatg aaatccttag aatgagtttc tctagcttgt tcccaacgat gtctatgctc
     4081 acccttagca ggttacaccc aagattacat atgtggacat atgctgccca gggtcttact
     4141 gaatctccca agctggcctc aaatttagga gcatcctgcc tcagctttct aagacactga
     4201 gattacaggc ttatagctct atgtctggct cagtttgcat aatgtctgtt gatatctaat
     4261 gtctagtaat ccctgaaaat cttaagtatc aacacttccc aacgctggct accttgctaa
     4321 tggatttgga tttgtttgga gataatttag aaacatttta ttcagaaaaa cagaaatcac
     4381 attttaccac aatggaggaa atttaggatt atgtgttaat ggactgaaaa aactgacgcc
     4441 aggtttggtg gctcatgcct gtcaccccat tattgggagg atcaccccag gttcaaagcc
     4501 agcatgggta tatagtgaga ccctgtctca gaggatcaca aaataaataa taaaataaaa
     4561 taaaatgcag ggaggggcca gagatgacat tgaggtaacc caaaggaagt tgctttgtgg
     4621 atcagctacc acccctaggg ctagtgaaaa gggagatcaa gtctggacta aagcacttga
     4681 gcagtaaggc atgacccagc tgggatatag ctcagacctc caggaggaag ctctcaggtt
     4741 ggctcttcta ctgctcaggg aatgatgtgc aagtagaata atgccaaaag taatcccaaa
     4801 aataagggta aaatcaagtc aaacagcaaa tgataaggca agtggaaaga gggaagtccc
     4861 tctcctgcca tctaatctat tgacttgttt gctttgtcaa gtatgtgtgt gtgtgtgtgt
     4921 atgtgtttgt ttatttgcag tactgggggc tcagtttttg ccttctaatc tccccctgtt
     4981 gacttatttg cttttattta ttcgtttatt cattaatttg cagtgctggg agttgagcct
     5041 aaagcagctt gctacatagt atgagctata tccccagtag actttctttt ttttgaaaac
     5101 cagtctgagt aagttgccaa agctaaccct gaactttgtg atccacctgc cacagcttcc
     5161 caagtagcta gaattacagc cctatgccat cgggctcagc ccctctgtaa tgtcctttgt
     5221 aggcagaacc ctgtgagaga tactggtagc atcagaaaag tgaaacatgt ggggctgagc
     5281 cttagcatca catacgaaag tatagacggg agctaaggca gtaccttaat gatcagtcac
     5341 gtcaacagaa gcgtgagcag aatgaagagc agcccagatt agactcacat tgatgctgcc
     5401 tggtaggctt ttacaagcct agaggtccct ttgaagacat cctcaggatc ccatatcagt
     5461 tctctactgt atcgtgataa ctgctagtgt taaaattttt taattataat ttttctttat
     5521 tcttgagaat ttcatacatg tatacaataa aatattatca tatctgtccc catttccctc
     5581 ctctaactcc ccatgtgccc ctcaacatac cctactccca acataatgac ttttttggtt
     5641 ttgatttttg ttttagtttt gtttgtgaca gggtttctct gtctctgtta gccctgcctg
     5701 tcctagaaat gactttttta gaaaagtaac ccattaagtc caattactgc tgtccacagt
     5761 ggagggaggg gaacctggaa
//
