LOCUS       NM_001177535            1258 bp    mRNA    linear   ROD 05-MAR-2024
DEFINITION  Mus musculus Aly/REF export factor family member 10 (Alyreffm10),
            mRNA.
ACCESSION   NM_001177535 XM_001480538 XM_001480542 XM_001480543
VERSION     NM_001177535.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1258)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 1258)
  AUTHORS   Zambrowicz,B.P., Abuin,A., Ramirez-Solis,R., Richter,L.J.,
            Piggott,J., BeltrandelRio,H., Buxton,E.C., Edwards,J., Finch,R.A.,
            Friddle,C.J., Gupta,A., Hansen,G., Hu,Y., Huang,W., Jaing,C.,
            Key,B.W. Jr., Kipp,P., Kohlhauff,B., Ma,Z.Q., Markesich,D.,
            Payne,R., Potter,D.G., Qian,N., Shaw,J., Schrick,J., Shi,Z.Z.,
            Sparks,M.J., Van Sligtenhorst,I., Vogel,P., Walke,W., Xu,N.,
            Zhu,Q., Person,C. and Sands,A.T.
  TITLE     Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap
            screen to identify potential targets for therapeutic intervention
  JOURNAL   Proc Natl Acad Sci U S A 100 (24), 14109-14114 (2003)
   PUBMED   14610273
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC141428.5.
            
            On or before Apr 16, 2010 this sequence version replaced
            XM_001480538.1, XM_001480542.1, XM_001480543.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMN01164134
                              [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-106               AC141428.5         81288-81393         c
            107-1258            AC141428.5         78913-80064         c
FEATURES             Location/Qualifiers
     source          1..1258
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="10"
                     /map="10 54.72 cM"
     gene            1..1258
                     /gene="Alyreffm10"
                     /gene_synonym="100043292; Gm4340"
                     /note="Aly/REF export factor family member 10"
                     /db_xref="GeneID:100043292"
                     /db_xref="MGI:MGI:3782524"
     exon            1..106
                     /gene="Alyreffm10"
                     /gene_synonym="100043292; Gm4340"
                     /inference="alignment:Splign:2.1.0"
     exon            107..1258
                     /gene="Alyreffm10"
                     /gene_synonym="100043292; Gm4340"
                     /inference="alignment:Splign:2.1.0"
     CDS             133..939
                     /gene="Alyreffm10"
                     /gene_synonym="100043292; Gm4340"
                     /codon_start=1
                     /product="RNA and export factor-binding protein 2-like"
                     /protein_id="NP_001171006.1"
                     /db_xref="CCDS:CCDS88081.1"
                     /db_xref="GeneID:100043292"
                     /db_xref="MGI:MGI:3782524"
                     /translation="MTTMADKMDMSLEDIIKLTKIQQRRHDRPDSRVNRGTGSKRYRP
                     AFTHGGRNRLAPYCRPKQLPDKWQHDLFIGGFRGQNHVDTGGKLFLSNLHFGVSDADI
                     QLLFAEFGTLKKSAVHYDRCGRSLGTAQVHFERKADALKAMREYNGAPLDGRPMNIQL
                     ATSQIDRQGRPAQSKNRGGMTRNPGSGVLSGGGTKKWTLGGSQGRGRGTIRNSKLQQQ
                     QQQQKQKQQQQQQKQQQKQQQKQQQKQQQQLSAEELDAQLDAYQEMMDTS"
ORIGIN      
        1 tcttgctcct tcgcctgctt gctgtgtgag actgagtaac tgctagatcc ttggacttcc
       61 attcacagct tcgactgaac aattgttggg aatttggctg ccgactgtac cttggataca
      121 aggccaaatt ccatgactac catggctgac aaaatggaca tgtcattgga agacatcatt
      181 aagctgacca agatccagca aagacgtcat gacaggcctg attcccgggt gaatcgaggc
      241 actgggtcta agaggtatag gccagctttc acccatggtg gaaggaacag gctggcacca
      301 tactgcagac caaaacaact tccagacaag tggcagcatg acctgttcat tggaggcttc
      361 aggggtcaaa accacgtgga tactggtggg aagctcttct tgtcaaatct gcacttcgga
      421 gtgtcagatg ctgatattca gctactcttt gctgaatttg gaacgttgaa gaaatctgct
      481 gtgcactatg atcgctgtgg acgaagttta gggacagcac aggtgcactt tgaaaggaaa
      541 gcagatgccc tgaaggctat gagagagtac aatggcgccc ctttggatgg ccgccctatg
      601 aacatccagc ttgccacctc acagattgat agacaaggaa gacctgcaca aagcaaaaat
      661 aggggcggca tgacaagaaa ccctggctct ggagtattaa gtggtggagg caccaagaaa
      721 tggacacttg gaggcagcca gggaagaggg agaggcacca tcaggaactc aaaactgcag
      781 caacagcagc agcagcagaa gcagaagcag cagcagcagc agcagaagca gcagcagaag
      841 cagcagcaga agcagcagca gaagcagcag cagcagctat ctgcagagga gctggatgcc
      901 cagctggatg cttatcagga aatgatggac accagctgaa caattgagca aagctgcaca
      961 agaacggaac ccatggcctg gtctgtgatg cctagactga gggttggcta ctggaccatg
     1021 aacacaatgg tggattcctc ctttgcttct tttgcttttc tcctgtttta aaaccccatg
     1081 taaagttctt tctttctctc cttctttctt ttatttacat tcagaaatac acctgttttg
     1141 tgctgagtta ttttgtggat aaattatagt ttttgctttt gtgaagttgg cattttcacc
     1201 tttgccctaa taaaattgtg tgtagaaata aacaagtatt ctggagtcat aaagtaat
//
