LOCUS       XM_030248866            5940 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus predicted gene, 41408 (Gm41408), mRNA.
ACCESSION   XM_030248866
VERSION     XM_030248866.2
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000081.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_030248866.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 12% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..5940
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="15"
     gene            1..5940
                     /gene="Gm41408"
                     /note="predicted gene, 41408; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 1 EST, 32 long SRA reads, and 93% coverage of the
                     annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:105246049"
                     /db_xref="MGI:MGI:5624293"
     CDS             1..972
                     /gene="Gm41408"
                     /codon_start=1
                     /product="translation initiation factor IF-2"
                     /protein_id="XP_030104726.1"
                     /db_xref="GeneID:105246049"
                     /db_xref="MGI:MGI:5624293"
                     /translation="MVLSHFVQAPTAPALIIFIEPIHGWADTGAGHTCAVSISRPVGP
                     RAARAAGFKNDGGGGEAAAEGGRERPRPGAGQRFLVQAPGRSQPSEVWFHKRDPEARG
                     RTRTPRESGPAWERPEARPTRSHCGWGSCGPGLEPLPASAEAPQPAPPRSAPRPRARP
                     NWTSAPRRPGPRLPTLLAAKDTARAAREPQTLPARPARAPAAPRCAAPRGASSALSGP
                     PCLPEAEVPRPRRRRRPGLRQSAAKFCTMDSSGRSEARAARGLARTAGSGARRQPRSR
                     RPGQAALAPRRLRHRRSPPPPCLAAPSLSPSLLPRGSAAPPQVGALW"
ORIGIN      
        1 atggttctgt cacactttgt ccaggctccc acggcgcctg ccctcatcat cttcattgag
       61 cccatccatg gttgggctga cactggagct gggcacacct gtgcagtttc gatctcccgg
      121 ccggttggac cgcgggcagc ccgggcagcg ggttttaaaa acgacggcgg gggtggggag
      181 gcggccgccg agggagggag ggagaggccg aggccaggcg ccggccagcg cttcctcgtt
      241 caggcgccgg ggaggtcaca gcctagtgaa gtttggtttc acaagcggga cccggaggct
      301 cggggacgaa cgcgaactcc acgggaaagc gggccagcct gggagcgccc ggaagcacgg
      361 ccgacacgtt cccactgcgg gtgggggagc tgcgggccgg gcctggagcc ccttcctgcc
      421 tcggccgagg ccccgcagcc cgcgccgccc cgctctgctc ctaggccccg cgcgcgccca
      481 aactggacct ccgccccgcg ccgcccgggg ccgcggctcc caactttgct cgcagcgaaa
      541 gacaccgccc gagccgcgcg cgagccccaa actttgcccg cccgcccggc ccgcgccccc
      601 gccgcgccgc gctgcgctgc gccccggggc gcctcgtccg ctctctccgg cccgccgtgt
      661 ttacctgagg ccgaggtccc gcggccgcgc cggcgcagga ggcccggtct ccgtcagtcc
      721 gccgctaagt tctgcaccat ggactcctcc ggccgctcgg aagcgcgcgc ggcccgcggg
      781 ctggctcgga cggccgggtc gggagcacgc aggcagccac gcagcaggag acccgggcag
      841 gcggcgctag ctccgcgccg cttgcgccac cgccgctccc ctcccccgcc gtgtctggcg
      901 gctccctccc tttctccctc cctccttccg cggggctcag ccgcgccgcc acaggtcggc
      961 gcactgtggt gacgacgcgg gcgggcgggc gggcgggcgg ctggacccgc cgcacgctac
     1021 ctgctcgcgg gcgctgccgt actcccccgg acctccaggg ggcgcccgcg agccgcgacg
     1081 gacggacgga cgtggtgggc ggggcacgcc gcccggctgg agagcgggag ctccggcgtc
     1141 tgcgagtggc cggggcttct gggaaacatt cttcttgccc cgccctcttg ccgctcggag
     1201 cgctacgcgc acgcgccgtg ctcagtcctc gctccacccc tttccccctc atccccaccc
     1261 ccgcccctgc gccctggccg cgctctctct ggtcgtggcc tttcctggca ggctccgtgg
     1321 gcgacaataa agatgttttg gagagactgc agtcccgaga agaactcgtg cgtagttggc
     1381 acggatgaag tactccgccc gctgcacgtg cgcggcggcc tgccagcccg ggacacactc
     1441 ccacgcccta agcccgcgtc cccgaggcta gccgagcctg gctggcttta agtgcttcca
     1501 ctttcagtca ctctgcgatg tcctcctgcc ctgcagcgcc ctcggatctt ttgtttcacc
     1561 tcggaggtgt ctttacaggc ttttcgtcag gcgctggctt tttcaccccc tgctccacgc
     1621 tctagctttt cctagttgtc ctcttgcaat ccacgctgtc gcctggccac cccaacccag
     1681 gctgttccct ccctacctcc agcccagcag cgtcccctgc cctcctctct gatcctgtcg
     1741 cttccctggc atcttcatcc tgtgctactt ggctgttcag tgcccgtcac gtcacaccga
     1801 agtttgggat gatgtctcgt taagctcttc acagagccga gcaccagcaa gggactgggt
     1861 aaataaccgc ttaggaatgc aatgaatggc agccttgtct ctcccagtgt cagtgagcta
     1921 tcttcatagg tttggaaatg tggtgttcct gtgtgcaagt atttcgcagt gatttagagg
     1981 tgttaaaata ctttgttctg atgaaacaag actttctgag ggacctttct cttgtaatga
     2041 cgacgaatga agctggtgat taagaaaacc taaaaacctg ttgaaactgt tgtgtgacag
     2101 aatcaagtca aaggcactgt taaccatcct gcagagataa agtttagctt tcctgtgtac
     2161 actcggggtc cagaattcac cctagagaat tttatcagta agagcaattc ccggtgaaga
     2221 tgtgatattc ttttgtatgt attttatttt gtttttaatg cagagtctca ctgtgcagac
     2281 cgatcctcaa actccacatc tcctacttca aatttattgc tctacctttt gtgttcgcaa
     2341 catttaaaat tcactctgta gccatcgtgc tgggtaacag agcacgagaa aaggctcctc
     2401 ctgcctaact gccctttgac cacctcccgc ccccatccac ctccccctcc acacacacaa
     2461 tacttaccta acagaaacga aggtgcattg taatataggc tgtttcttgt tccccaagag
     2521 agagaccctg cctatttcta tatatggtgt tctcctcttt actgtgtttg catgataaga
     2581 atgtgttttg tttccttttt ttttttttaa atttatcaga gagggtaaat ataaaacaga
     2641 tggataatgt cgatggcata cctgttaata ctttagactc atttataatc ataaacaagt
     2701 gagggctagg gaggtggctc attaagtgct taccacacaa gcatgaggac ctgaggttga
     2761 ctccccagaa cccacagaaa gttgggcacc atagcaggca tccgtaattc cagggctttc
     2821 acggagagac aacaggagag acctctgaag ctagcctgct gtcagagaca acagacccta
     2881 cctgtagagt gtagaaggca agaattgata cccaaggttg tcctctgacc ccacttgtgc
     2941 actgtgggac acacactttc acgagtacac cacaacagag aagtacccca tgaacaaaca
     3001 tgtacataca gagagcattt tagtttattt tttatgtata tgggtatttt gcttacatgt
     3061 atgtctgcac cacattcttg cagtgcccat ggaggccaga agaggaagac aaggtgtctg
     3121 gggctggact tccaggtgga gttatgaacc aggttgttgt tgctgatact caaacctagc
     3181 tcatctggaa gagaaatgct aataactgac ctgaactatc tctccagtct ccctccccct
     3241 cccccccaaa agagatttgc taagatctac aaatggtgca cataaaaata ccttcattga
     3301 aattctcaat tgtgttgcag tttctcgggc aaccatcctt tcacagtgtg atagaaaccc
     3361 atagcattga aaaaccaaaa acaaacaaac aaacccatag cagcagcttt gaaaatgaaa
     3421 ggtgatcggt caatgtatac atttttatgg gttcatcaga aataattgct ataatctgtc
     3481 ttttatgaat gtaacacaaa acaaaattca cattaagaga agaagaaaaa agaaatcatg
     3541 gaataaagac cttgggttac ttaacccctt ggcagtttta aacaaataac cccgtgtttt
     3601 atcttcgatt tttatataac aggaggtttt caatttaatc tgtatagtgt gtttatgtca
     3661 ataaaaattt acaaattcaa aaggtatgca gttaagactc atggacaaaa tgtggtcaaa
     3721 tatgcaatgt ccatataacg aatggaaact aaatgctata aggaaaagtt acaggaactt
     3781 tcacaaaata atatagcttt attaaaacca atattccact caagaaagat gaacctccag
     3841 atacagtctc ttaacactaa tcagcgtaac caaatacaga cagagtcagt ggtgtgcccg
     3901 cattggtgtg cacaggggtt agcattctgc attgtaagtc aataaagcaa gccctcctag
     3961 ctccagcccc agccactggg aagtacacat aaatgattgt acactctgca ataataccct
     4021 agctgtgaac tttgaatcac gtggtaaatt gccatccgcg tgggtgacac cagaaccccg
     4081 cagccctagc accaaattca gtgctgttca atcttggcat cagctgttct caccgaacaa
     4141 atactgtggc cgaccactgc tgacgtgatc aagcccgtat cattttaccc atgttaccac
     4201 ctgtccaagg tccatcacct tcgagaaaag ctcttgcgcg cgccagactt gaccagcaag
     4261 aacgacgctg caacaggatc cttctgcaca cgtttattgg gagagcttga ttgcagaggc
     4321 gaaaagaccc cgagcccaga actgatgctg tttatatagg cctaggagag gcttgtctca
     4381 cacccggatt ggttatgcac tatgcctcat ttgcatgttc ctcatctgat tagctactct
     4441 ctctctctgt acctcacaga gcctcattat catacctcat ttgcatgtct cacatctgat
     4501 tggttatact ctcaaagcct cattatcatg cccgggccag gcagtgtctt tgcaaaaaac
     4561 tttactgcat atgtacacat tggttgtttg tccaaactta tgcgtggtgg ccagcagtag
     4621 tcagtgccac tctgcaacgg cacatgtggc ttcccacaaa aagctgtact ctccttgatg
     4681 tcacaccctc tggcagaggc tggctataac tgggtttatc gctaacagtt gtcaaacagc
     4741 agggcagaga caccttcaaa ggcgagcaag gccagtttgc tacgtcaaat gtcttggtta
     4801 ccctgaggat gtaacaacca atgctccact ggtagtgaca gactactgaa ctacagacag
     4861 cgagtttggt gtgggaagga aatcttggct gcaggcagat acttctgtcc tcagaggcaa
     4921 agtttttcag cattggtcat tgatttcttt ctcaactaga caaattttaa tcatcttttc
     4981 cacactccag gagatataga tgctctagat aatgcaagag agatttgatg acgcctccac
     5041 aaaactacct tggtcatcca gtccatttgc caagtttgca tagtcactca cctagagagg
     5101 cagttcgtca ttgcagtcca tgttaaacat tgcctcccat ccaccctaat gtgtcccttg
     5161 aagcgctggg tccttcccag aattccatct cagcaggcca gtgttctcca cggctgccta
     5221 acggaagctt ctgcccatca gatttcacgg ctacccaact gtggctctgg atgccgtaat
     5281 taagttaact gtgcttccac ctcagggcgt ggcagacagg tcacgtgacc atgtgccgga
     5341 gaagtccacc tctgtgtcca gttaatgata agatttccaa ggctttgcat cctccagcta
     5401 cttcattctc agaatagccc tcagataaac ctcttccagg acaaaacgtc ctgaatgaaa
     5461 tccccttcca cgaaaatgtc tacatgcagt ctgcccggcc tccactgttt agagacaaga
     5521 cagcacttgt gcaggatctg aggattgaga cattgtaaca cataaaaact gaactccgag
     5581 ggaaggagtt taaggatagc atcctgttac ggcagaagat gcctgggctg tttggcccca
     5641 ctcagacaag tcccgtgatc cagagtttca tttttctgcg aatctgggaa agaaatgtaa
     5701 cggaaataat accaagtcat gtctcaaagt cctttctttc cataagttta taaaaatatt
     5761 tacctaaggg agcctgacag tgacttaagt cactcctagt cacggtatct gcgactgcag
     5821 acactacacc tggtctacag tctcacagga gcaagagaga tgatagttgg cctgtttgtg
     5881 tgttattttt taatttatta aacattttga tgcatgtgta gaacacattc tggtcacgat
//
