LOCUS       XM_017315275            1758 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus predicted gene 3993 (Gm3993), transcript
            variant X1, mRNA.
ACCESSION   XM_017315275
VERSION     XM_017315275.2
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000078.7) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_017315275.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1758
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="12"
     gene            1..1758
                     /gene="Gm3993"
                     /note="predicted gene 3993; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2 long
                     SRA reads, 53 Proteins, and 97% coverage of the annotated
                     genomic feature by RNAseq alignments, including 1 sample
                     with support for all annotated introns"
                     /db_xref="GeneID:102639021"
                     /db_xref="MGI:MGI:3782167"
     CDS             303..1022
                     /gene="Gm3993"
                     /codon_start=1
                     /product="hippocalcin-like protein 1 isoform X1"
                     /protein_id="XP_017170764.2"
                     /db_xref="GeneID:102639021"
                     /db_xref="MGI:MGI:3782167"
                     /translation="MPDQISVSEFLAETLEDYKAPTASSFTTRTAQCRNTVAAVEEDA
                     VTYDDVHVNFTGEEWNLLDPSQKSLYKDVMLETYWNLTVIGYTWENHHIERHCQSSRR
                     NERDTSKFTEHVFHTCDTNSDGTINFRVFIIALSLTSRGKLEQKLKWAFSMSDLDSNG
                     YISFSEMLELVQAIYKMVSSMMKMPEDKSMPENRTDKIFRQMDTNNEGKMSLDKFNKG
                     AKSDPSIVRLLQCDPSSASQF"
ORIGIN      
        1 gaaggcaccg gggcaagcgg cctgttggcg cgcaattcca gctggctgtt cgcgctagca
       61 tcagggctcg atctagagga cgcggcagcc gcagctcctg gagcacagcg ggcagagctg
      121 cgggctgcac gcgcacctgc agccaccggg cgtcccgcgg aggctcccgc gccctgcggc
      181 gacttccgcg cccgcgctcc cctttgtcaa agtccccaag cggcggcagg ggcggcggcg
      241 gggtcggagc ccgcgccgtg ggcgactgag gcggccgcag tccgcgcccc ggcgccctgg
      301 cgatgccgga ccagatctct gtgtcggaat tcctggccga gacccttgag gactacaagg
      361 cgcccacggc ctctagcttc accacgcgca cggcccagtg ccggaacacc gtggcggcgg
      421 tcgaggagga tgcagtgact tatgatgatg tgcatgtgaa cttcactggg gaagagtgga
      481 atttgctgga tccttcccag aagagtctct acaaagatgt gatgctggag acctactgga
      541 acctcactgt tataggctac acttgggaaa accatcatat tgaaagacat tgtcaaagtt
      601 caagaagaaa tgaaagagac acctccaagt tcactgaaca tgtcttccac acgtgtgaca
      661 ccaacagtga cggcactatc aacttccgag tgttcatcat tgctctgagc ctgacctctc
      721 ggggcaagct ggaacagaag ctgaagtggg ccttcagcat gtctgaccta gacagcaatg
      781 gctacatcag cttcagtgaa atgctggagt tagtgcaggc catctacaag atggtgtcct
      841 ccatgatgaa gatgcccgag gacaagtcca tgcctgagaa tcgaacagac aagatcttca
      901 ggcagatgga cacaaacaat gaaggcaaaa tgtccctgga taaattcaac aaaggtgcca
      961 agagcgaccc atccattgtc cggttgctgc agtgtgaccc cagcagtgct agccagttct
     1021 gaggggaatg ggcttttaca cacttgtgaa aacacaggct tgacctgcca tcttcagctt
     1081 tgcttgcaaa agtggttttc tctgtgattt ctcctgctct ctagggacct gggtccagac
     1141 agcacatcac actctcctgg tctggctgga tgcagctccc tcctctgtct gatccaatag
     1201 atgtccctcc ccatccagtc caggctggtt ccttccaagg tttcaagtgt tctccgctgt
     1261 agggctcctt ccctgcccac agagggcctg gaggccctta aggacaccag acaggacttt
     1321 tcagtatctt accgagacca gctgatttat tctatgatcc cagctgactt tgtgaggatg
     1381 aagaagatgg acagtaaata ggcaagcact tcctgtgcat ggcttcacct cccttcttca
     1441 ttttctccga ccaaagctgc ttgcatgtat atactgcagt atcctttctt ttaatatata
     1501 agttttgtat aaagtgagaa ggttcagccc ctgtatttaa agcctctgac tgcctttaaa
     1561 gcatggtccc ctatggcctg tgattctccc cacccccaag tctggctgtg ctgtggtatt
     1621 taagtattca tttgcctaat tacacaggag atacatgcat gcccaaggct gtggacatct
     1681 gccctccgtc ctgcaaacac aggtgttcct gtgtgctcca tccttccttt ccattgatct
     1741 ggcatattaa aatgatca
//
