LOCUS       XM_036157742            1103 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus predicted gene 3973 (Gm3973), transcript
            variant X1, mRNA.
ACCESSION   XM_036157742
VERSION     XM_036157742.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000078.7) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1103
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="12"
     gene            1..1103
                     /gene="Gm3973"
                     /note="predicted gene 3973; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3 long
                     SRA reads, 1 Protein, and 82% coverage of the annotated
                     genomic feature by RNAseq alignments, including 17 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:100042698"
                     /db_xref="MGI:MGI:3800304"
     CDS             280..771
                     /gene="Gm3973"
                     /codon_start=1
                     /product="hippocalcin-like protein 1 isoform X1"
                     /protein_id="XP_036013635.1"
                     /db_xref="GeneID:100042698"
                     /db_xref="MGI:MGI:3800304"
                     /translation="MDKQNSKLRPEVLQDLQNHKEFTDHELQEWCMGFLNDCPTGHLT
                     VDNFKIQPNFFPYRDASKLTEHVFHTFDTNSDSTINSPVFIIAVSMTSWGKLEQKVKW
                     AFSMSDLDSNGYISCSEMLEIVQVPALDRAWSMGSAGIQDPHPRPHTPGQVIPLPTCY
                     LVY"
ORIGIN      
        1 cgaacattta ctttacagtg atgtcagtac catgctttgt gatgtacaca tgtatgggat
       61 attttaggat gcagtgactt atgatgatgt gcatgtgaac ttcactgggg aagagtggaa
      121 tttgctggat ccttcccaga agagtctcta caaagatgta atgctggaga cctactggaa
      181 cctcactgtt ataggctaca cttgggaaaa ccatcatatt gaaagacatt gtcaaagttc
      241 aagaagaaat gaaaggttta gtctccactg ccagctgcca tggacaagca gaacagcaag
      301 ctgcgtcctg aggtgctgca ggacctgcag aatcacaagg agttcaccga ccatgagctt
      361 caggagtggt gcatgggctt cctcaatgac tgtcccactg gccacctgac tgtggacaat
      421 ttcaagatcc agcccaactt cttcccctac agagatgcct ccaagctcac tgaacatgtc
      481 ttccatacct ttgacaccaa cagtgacagc actatcaact ccccagtgtt catcattgct
      541 gtgagcatga cctcttgggg caagctcgag cagaaggtca agtgggcctt cagcatgtct
      601 gacctagaca gcaatggcta catcagctgc agtgaaatgc tggagatagt gcaggtacct
      661 gcacttgaca gggcctggag catggggagt gcagggatcc aggaccccca tccccggccc
      721 catacaccag gccaggtcat tcctctgccc acttgctacc tggtgtacta aaggactgca
      781 tgtctttgca gagaataaca taaaagccaa gcatctatcg attgcttgct ggacatccag
      841 ccccagctga gctcatccat cacacatttc tatcaaatgg gtcttttttt taaacttcta
      901 atgagatctg aggctcagat aggtgattaa gaattgtcaa agtggccagg catggtggtg
      961 catgccttta atcccagcac tcgggaggca gaggcaggtg gatttctgag tttgtggcca
     1021 gcctggtcta caaagtgagt gccagcatct gccaggacta cacagagaaa ccctgtatcg
     1081 agaaacaaac aaacaaacaa aca
//
