LOCUS       XM_055019665            1844 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus predicted gene 3858 (Gm3858), mRNA.
ACCESSION   XM_055019665
VERSION     XM_055019665.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000086.8) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 32% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1844
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="X"
     gene            1..1844
                     /gene="Gm3858"
                     /note="predicted gene 3858; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     ESTs, 1 Protein, and 71% coverage of the annotated genomic
                     feature by RNAseq alignments, including 1 sample with
                     support for all annotated introns"
                     /db_xref="GeneID:100042465"
                     /db_xref="MGI:MGI:3782030"
     CDS             1..1629
                     /gene="Gm3858"
                     /codon_start=1
                     /product="uncharacterized protein CXorf49 homolog"
                     /protein_id="XP_054875640.1"
                     /db_xref="GeneID:100042465"
                     /db_xref="MGI:MGI:3782030"
                     /translation="MSCNKEGAVEEVSLDPEDGEATNTCLDGPCSLQDLNLDPDMGSH
                     ISENEVKTEDNSEFDSGSKLQALESGMVDLQDHGEQPVSSARDEGDLMDCLPPDSNKV
                     EDKVQQPTDQMSQDVRSHSSPKSCATQQSTTWADTVADCSRRNRLGKRLGDVKQASMA
                     PVQHCGPKGGRACRTKKKKKVIKSKKTIPEDIQDPASDPDSSSDEYNEMHVMRVTICF
                     KNGGHIITGNAMAPEDKTRKRNVQLRGNFHHMTGSLRMSAPKGHMLGIGKLGASCSNR
                     KASVFRGKEQSRPPYPGAAVGVLRKASPKKKSAQEKKPLQDIPRATGRRPVPLWGQRP
                     KAAPVEVPTFPPINSVPTLESSKKHDTTPLEATEFTHGTSRKRAVAKNTRETLPVARE
                     DRGLECKDTMKNSTVMTQTSESSKVKEIDHAQVPPHRAEQPSVCMHRGEMSSGDSNTR
                     APQVPADSQLVAPSQGGTGTSPSPSPSPSPRASAPHGDQDRSVVPPLPVGEKQHQAPG
                     ILGCQQCTLLEKEACRLRKQLAVIRALNKRFQNL"
ORIGIN      
        1 atgagctgca ataaggaggg ggcagttgaa gaagtaagtt tagaccctga ggatggggaa
       61 gctactaaca cctgtttgga tggcccctgc tcactgcagg atctcaacct ggaccctgat
      121 atgggatctc acataagtga gaatgaggtc aagactgagg acaactctga gtttgactca
      181 gggtccaagc tacaggcact agaatcggga atggtggacc tccaggatca cggagagcag
      241 cccgtctcgt cagccagaga cgaaggggat cttatggact gcttgcctcc tgacagtaac
      301 aaggttgagg ataaggtgca acagccaacc gaccaaatga gccaggatgt tagaagccac
      361 tcatccccaa aaagctgtgc cacccaacag tctactactt gggcagatac agtggcagac
      421 tgcagcagaa gaaacaggct gggcaagagg ttgggagatg taaagcaggc ttctatggcc
      481 ccagtccaac actgtgggcc caaaggaggc agggcctgca ggacaaaaaa gaaaaagaaa
      541 gtcatcaaga gtaagaaaac aatccctgag gatatccaag acccagcgtc tgaccccgac
      601 tcatcatcag atgaatataa tgagatgcat gtgatgaggg tgaccatttg cttcaagaat
      661 ggaggacata tcataactgg caatgctatg gctcctgaag acaaaaccag aaaaagaaat
      721 gtccaactca ggggcaattt tcatcatatg actggctctc tgcgtatgtc tgctcccaag
      781 ggccatatgt tgggcatagg aaagctaggg gcctcttgtt ctaacagaaa agcatctgtg
      841 ttcagaggca aggaacagag taggcctcct tacccaggag ctgctgtggg tgtgctgagg
      901 aaggccagtc ctaaaaagaa atcagcccag gagaagaaac ccctacagga tatcccaaga
      961 gccactgggc gaagacctgt cccactgtgg gggcagagac ccaaggcagc tcctgtggaa
     1021 gtacccacct ttcctccaat aaacagcgtc cctacacttg agagttctaa gaagcatgac
     1081 acaacacccc tagaggccac cgaatttaca catggtacat ccagaaagag agcagtagca
     1141 aagaatacaa gggaaaccct gccagtggcc agagaagaca ggggccttga gtgtaaagac
     1201 accatgaaga attcgacagt gatgacccaa acatcagagt cctccaaggt taaggaaatt
     1261 gaccatgccc aagttccacc acacagggca gagcagcctt ccgtgtgcat gcatcgtgga
     1321 gaaatgagca gtggagactc caacaccaga gcccctcaag ttccagcaga ttcccagctt
     1381 gtggccccga gccagggagg caccggcacc agccccagcc ccagccccag ccccagcccc
     1441 agagcatctg caccccatgg tgaccaagat cgatctgtgg ttcccccact ccctgttggg
     1501 gagaagcagc atcaagcacc agggatactg ggatgtcagc agtgtacttt gcttgagaaa
     1561 gaagcatgca ggctgagaaa acaactagcg gtcattcggg ccctcaacaa aaggttccag
     1621 aatctttgaa gcgaatgttc tgctatccac agtcctttcc acggaaacct gggcctggcc
     1681 tgactattct gcctgaatgc ttggacccag aatcccttaa ggagaggaca gactactccg
     1741 acccaggatc ccaaagctgt ccctgcttat tccttttcct tattctacag ccagagccac
     1801 ctttatgccc ctgtttttgc cccatgtgtc ccggtaacag atat
//
