LOCUS       XM_036162135             754 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus predicted pseudogene 378 (Gm378), mRNA.
ACCESSION   XM_036162135
VERSION     XM_036162135.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000086.8) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..754
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="X"
     gene            1..754
                     /gene="Gm378"
                     /note="predicted pseudogene 378; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein, and 46% coverage of the annotated genomic feature
                     by RNAseq alignments"
                     /db_xref="GeneID:213454"
                     /db_xref="MGI:MGI:2685224"
     CDS             62..754
                     /gene="Gm378"
                     /codon_start=1
                     /product="polycomb group RING finger protein 6-like"
                     /protein_id="XP_036018028.1"
                     /db_xref="GeneID:213454"
                     /db_xref="MGI:MGI:2685224"
                     /translation="MSLPSSSLAKPVVESSPEAQGGLGADKHERAEGAEEAKKTLWPA
                     HPGLPPAGTTASLSGEEGQSSSGEVGTQECLASEPPQWEEGKAEEKAVVESEEKAAVE
                     SDQEERLIPLSQMIPYISCFICKGYLIDAATITECLHTFCKSCIVKHFEHSNRCPKCN
                     IIVHQAKPHKNLRMDPQLQSIVYKLVAGLEENEKKQRREFNKEHCLGPPEPAAVPQPG
                     HSSEENTKEVVE"
ORIGIN      
        1 atctcgactt atctctagcc tctacctaac ttcccgtctc tgctttacac aaaatctggc
       61 catgtcttta cccagttcat cccttgctaa gccagtggtg gagagcagcc cagaggccca
      121 aggtggcctg ggtgctgaca aacatgagag agctgaggga gcagaggaag caaagaaaac
      181 cctgtggcct gcacacccgg gtttgcctcc tgcaggcacc acagcatccc tgtctggtga
      241 ggagggccag tcctccagtg gggaagtggg aactcaggaa tgcctggcat ctgagcctcc
      301 tcagtgggaa gagggtaagg cagaggagaa ggcagtagtg gagtcagagg aaaaggcagc
      361 agtagagtct gaccaggaag agcgtctcat tcctctctca cagatgatcc catacatctc
      421 ctgttttatt tgcaaaggct acttaataga tgcggcaacc attacagaat gtcttcatac
      481 tttctgtaaa agctgcatcg taaaacattt tgagcacagc aacagatgtc caaagtgcaa
      541 cattatagtg caccaggcca aacctcataa aaacttgagg atggatccac aattacaaag
      601 catagtatac aaattagtgg caggtctaga ggaaaatgaa aaaaagcaga ggcgtgaatt
      661 taataaagaa cattgtctgg gaccaccaga acccgctgct gttccacagc caggccattc
      721 aagtgaagag aacactaagg aagttgtgga atag
//
