LOCUS       NM_001368229            2087 bp    mRNA    linear   ROD 22-APR-2022
DEFINITION  Mus musculus predicted gene 3696 (Gm3696), transcript variant 2,
            mRNA.
ACCESSION   NM_001368229
VERSION     NM_001368229.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2087)
  AUTHORS   Tu S, Shin Y, Zago WM, States BA, Eroshkin A, Lipton SA, Tong GG
            and Nakanishi N.
  TITLE     Takusan: a large gene family that regulates synaptic activity
  JOURNAL   Neuron 55 (1), 69-85 (2007)
   PUBMED   17610818
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC141567.4 and AC164618.3.
            
            Transcript Variant: This variant (2) differs in the 5' UTR and
            coding sequence compared to variant 1. The resulting isoform (b) is
            shorter at the N-terminus compared to isoform a. Variants 2 and 3
            both encode the same isoform (b).
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR1660817.154306.1,
                                           SRR7345562.1710343.1 [ECO:0000332]
            RNAseq introns              :: partial sample support SAMN00849380,
                                           SAMN00849390 [ECO:0000350]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-131               AC141567.4         76337-76467         c
            132-282             AC141567.4         71529-71679         c
            283-445             AC164618.3         198295-198457       c
            446-577             AC164618.3         197213-197344       c
            578-759             AC164618.3         196356-196537       c
            760-2087            AC164618.3         191531-192858       c
FEATURES             Location/Qualifiers
     source          1..2087
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="14"
                     /map="14"
     gene            1..2087
                     /gene="Gm3696"
                     /gene_synonym="100042149; 544988; Gm10014; Gm5794"
                     /note="predicted gene 3696"
                     /db_xref="GeneID:100042149"
                     /db_xref="MGI:MGI:3781872"
     exon            1..131
                     /gene="Gm3696"
                     /gene_synonym="100042149; 544988; Gm10014; Gm5794"
                     /inference="alignment:Splign:2.1.0"
     exon            132..282
                     /gene="Gm3696"
                     /gene_synonym="100042149; 544988; Gm10014; Gm5794"
                     /inference="alignment:Splign:2.1.0"
     exon            283..445
                     /gene="Gm3696"
                     /gene_synonym="100042149; 544988; Gm10014; Gm5794"
                     /inference="alignment:Splign:2.1.0"
     CDS             318..764
                     /gene="Gm3696"
                     /gene_synonym="100042149; 544988; Gm10014; Gm5794"
                     /note="isoform b is encoded by transcript variant 2;
                     alpha25-takusan; alpha32-takusan; alpha5-takusan"
                     /codon_start=1
                     /product="alpha25-takusan isoform b"
                     /protein_id="NP_001355158.1"
                     /db_xref="GeneID:100042149"
                     /db_xref="MGI:MGI:3781872"
                     /translation="MTKKRSKRNELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRM
                     NTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLNE
                     NVRILLNENRRLLVEQAGHKCPVGKKRGSLRRPQEHLCPKCQGTAV"
     exon            446..577
                     /gene="Gm3696"
                     /gene_synonym="100042149; 544988; Gm10014; Gm5794"
                     /inference="alignment:Splign:2.1.0"
     exon            578..759
                     /gene="Gm3696"
                     /gene_synonym="100042149; 544988; Gm10014; Gm5794"
                     /inference="alignment:Splign:2.1.0"
     exon            760..2087
                     /gene="Gm3696"
                     /gene_synonym="100042149; 544988; Gm10014; Gm5794"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggcgaacgcg tcggaagcca gagagcgccg tgtccctgcg ctctgtcggt cagcgggcgc
       61 gggccggcag gatggagctg cagcacgtgc gccccgtgct tggatcccag agcccagcct
      121 gggaggaacc ggggctgctg gtgtaccacc atcatcccca acactcctgt tcagaagatg
      181 ggtgaggaaa gtggaaagtc taatcagtca gccgatgacc agtgggaaaa aagagctaca
      241 agatcacctg atcttcatca gtgagaaagc tttgcacaag agggtctgct agaaatactt
      301 caacccaaaa ttccaaaatg accaagaaga gatcaaaaag aaatgaacta gaagaactga
      361 aattggatat gaggaagatc agcaatgaca tggaggaaat gtgtggaatc ctgaaccttt
      421 acatgtatga ggatttgaac tacaggatga acactgaatt caacatcatt aaatcacaac
      481 atgagaagac aatgttggat atgaataaaa tgatccagtc cataattggt tccatgcagt
      541 actccaagga actgatagaa gataactatt cctacagcat taaggaggac cacctcctcc
      601 gtgagtgcac tcaactcaac gaaaacgtaa ggatattact gaatgagaac agaaggctgc
      661 tggtggagca ggctggccat aagtgtcctg tggggaagaa aagaggttct ctgaggaggc
      721 cacaagaaca tctgtgtccc aagtgccaag gaacagcagt gtgatatagt ccagcagaaa
      781 gcagaacatg gcacagacca cgacatgatc tccctcaaag agaagtgctg gaggaagagc
      841 actgagtgtg cacaggaaat acaccactgt tgcctctcat ccctaataac catggctgta
      901 atgggctgta tgctcctctt ttattttgtt tctttggtat gaacaggcct taatttcatc
      961 tagcctctgg cccaggaaga gtgcacattt aaagggactc agagaaatgc tgagacacat
     1021 caagagctgc tgggcatcca ggaagattct gagagtttat atttatcttt tcctgatggg
     1081 tcatcatcaa taattacatg gagatcagtc aacaaaattg taaaaccttg gatccaagtc
     1141 tacaacatgt gttctgcttt gacttgggag gccatatcct tcagacccac actccaaaag
     1201 gagagtgttg cttaaatttc tcctgcaaag tttgttacct ccaggaacta cttttctact
     1261 aagttgccaa ggacagccac aggctgtaag tctgtgctac aaaatgagca gactaagaat
     1321 tttgctttgc acaatttttg tggtttgatt ttggtttgag ttttgattag tttagttatt
     1381 tgttttttct tgttttcatt caaagttttg ttatttattg gttatttatt gttcttttaa
     1441 ttaatttgat attttgataa ggttatacac agtacatatt gactgtcagc tttcagttac
     1501 aattgagtac attgcatttt ttcttatgac taacacagtg atctccaact cttcactcta
     1561 agagccttgt tatttcagtt gtgatcatga aatcccacag atatcagacc cagatggatc
     1621 tctatactct tcatgggact tgggctccat agtttcttct gagccgtact taactacaaa
     1681 gtccttcata cattcagtat ggagagtttg tccaactgtc tggataggaa cttaatgatg
     1741 gaaaacttac ccatgctgca tcgttgctgt caaatattta gctactgtga aaatcctgtg
     1801 gatgatggtg ttgaacgcat taatggcaaa tacatcagta tttctgtaat agctctcatt
     1861 aaatcaaagc atagtctaag ggaataaaaa gctgtcagaa aacacagcag tgtatgcttc
     1921 tgcgttcctt caaatataca atcactggta attgcaagtg gtttctgtgg gggtccttca
     1981 atgttcattt tattacttta tgattcacct gtgtctgcca aaaaacatca ttcaaaaaca
     2041 atgaagattg taattaggta tcatcctata aaatcctaac aaatgcc
//
