LOCUS       XM_006526420            1287 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus predicted gene 3650 (Gm3650), mRNA.
ACCESSION   XM_006526420
VERSION     XM_006526420.5
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000084.7) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_006526420.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 17% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1287
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="18"
     gene            1..1287
                     /gene="Gm3650"
                     /note="predicted gene 3650; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     ESTs, 245 long SRA reads, 2 Proteins, and 87% coverage of
                     the annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:100042074"
                     /db_xref="MGI:MGI:3781826"
     CDS             1..924
                     /gene="Gm3650"
                     /codon_start=1
                     /product="spatacsin-like"
                     /protein_id="XP_006526483.1"
                     /db_xref="GeneID:100042074"
                     /db_xref="MGI:MGI:3781826"
                     /translation="MGLPLLNTFPVTELRCTAHKCNLYLWSLNRNVTLLTLLNNKLED
                     FLLTSDLRYTLFSGQTGTLKTALLDYIKRCRPGDSEKHNMIALCFSMCREIGENHEAA
                     ACIQLKLIESQPWEESLKDGAQLKQLLLKALTLMLDAAESYAKDSCVRQALHCNRLTK
                     LITLQIHFLNSGQNTMLINLGHQKLMDCIMTLPRFYQASIVAEAYDFVPDWAEVLYQQ
                     VILKGDFSYLEEFKQQKLLRPNIFEDISKKYKQHQPTDRVTENLKKLLSYCEDIYLYY
                     KLAYEHKFFEIVNMLLKDPQTGCCLKDMLAG"
ORIGIN      
        1 atggggctgc cacttttaaa cacctttcca gtcacagaat taagatgtac agcacacaag
       61 tgcaacttgt acctttggtc actcaatcgc aatgtcactc tcttaacact tttaaataat
      121 aagctggaag atttcctgct gaccagtgac cttagatata cccttttttc tgggcagacc
      181 ggcaccctga agacagccct actagactac atcaaacgtt gccgccctgg agacagcgaa
      241 aagcacaata tgattgccct gtgcttcagt atgtgccggg agataggaga gaatcacgag
      301 gcagcggcct gcatccaact gaagctgatt gagtctcagc cctgggagga aagcctcaag
      361 gatggagccc aactaaaaca gctcctgctt aaagccctga ctctgatgtt ggatgcagca
      421 gagagttacg ccaaggactc ctgtgttcga caggccctgc actgtaaccg gctcaccaag
      481 ttgataacac tacagattca ctttctcaac agtggccaga atacaatgct tatcaacttg
      541 ggccatcaga agctaatgga ctgtatcatg accctacctc ggttctacca ggcttctatt
      601 gtagctgagg cctatgactt tgttcctgac tgggctgaag tactctacca acaagtgatt
      661 cttaaaggag actttagtta tttggaagaa tttaagcagc agaagttact aagacccaat
      721 atatttgaag acatttccaa aaaatataaa caacaccagc ctaccgacag ggtcacagaa
      781 aacctgaaga agttactttc atattgtgaa gatatctacc tgtattacaa gttggcatat
      841 gaacacaaat tttttgaaat tgtaaatatg cttctgaagg accctcagac gggatgctgc
      901 cttaaagata tgctcgcagg ttagaagatt ggaaaggcgc ctgattgctt gcttgtacct
      961 atacagctct aagggatgtt caatcctaat aaagtatttg gagatcttta cccccatttg
     1021 agttgaaaag cccagaaata taccatactg cactagtcgt ttgtggctgt agggaacgga
     1081 ggaaaaatta gtattgagat cagaagtgtt ttgttagagt ggcttctaca tcagagaaac
     1141 aatagtggtt aaagaacgcc tgtacctgca ggttccagtt tcaaagcaat ttaatcttat
     1201 ttacacagtt aaggaacacg tgatacattt tcatgagtta gaaactgaac tttctataat
     1261 aaaatagttt ttatttcagt gtcatta
//
