LOCUS       NM_001378676            2775 bp    mRNA    linear   ROD 09-SEP-2021
DEFINITION  Mus musculus predicted gene, 35588 (Gm35588), mRNA.
ACCESSION   NM_001378676 XM_011250933
VERSION     NM_001378676.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2775)
  AUTHORS   Hansen GM, Markesich DC, Burnett MB, Zhu Q, Dionne KM, Richter LJ,
            Finnell RH, Sands AT, Zambrowicz BP and Abuin A.
  TITLE     Large-scale gene trapping in C57BL/6N mouse embryonic stem cells
  JOURNAL   Genome Res 18 (10), 1670-1679 (2008)
   PUBMED   18799693
REFERENCE   2  (bases 1 to 2775)
  AUTHORS   Carninci P, Kasukawa T, Katayama S, Gough J, Frith MC, Maeda N,
            Oyama R, Ravasi T, Lenhard B, Wells C, Kodzius R, Shimokawa K,
            Bajic VB, Brenner SE, Batalov S, Forrest AR, Zavolan M, Davis MJ,
            Wilming LG, Aidinis V, Allen JE, Ambesi-Impiombato A, Apweiler R,
            Aturaliya RN, Bailey TL, Bansal M, Baxter L, Beisel KW, Bersano T,
            Bono H, Chalk AM, Chiu KP, Choudhary V, Christoffels A, Clutterbuck
            DR, Crowe ML, Dalla E, Dalrymple BP, de Bono B, Della Gatta G, di
            Bernardo D, Down T, Engstrom P, Fagiolini M, Faulkner G, Fletcher
            CF, Fukushima T, Furuno M, Futaki S, Gariboldi M, Georgii-Hemming
            P, Gingeras TR, Gojobori T, Green RE, Gustincich S, Harbers M,
            Hayashi Y, Hensch TK, Hirokawa N, Hill D, Huminiecki L, Iacono M,
            Ikeo K, Iwama A, Ishikawa T, Jakt M, Kanapin A, Katoh M, Kawasawa
            Y, Kelso J, Kitamura H, Kitano H, Kollias G, Krishnan SP, Kruger A,
            Kummerfeld SK, Kurochkin IV, Lareau LF, Lazarevic D, Lipovich L,
            Liu J, Liuni S, McWilliam S, Madan Babu M, Madera M, Marchionni L,
            Matsuda H, Matsuzawa S, Miki H, Mignone F, Miyake S, Morris K,
            Mottagui-Tabar S, Mulder N, Nakano N, Nakauchi H, Ng P, Nilsson R,
            Nishiguchi S, Nishikawa S, Nori F, Ohara O, Okazaki Y, Orlando V,
            Pang KC, Pavan WJ, Pavesi G, Pesole G, Petrovsky N, Piazza S, Reed
            J, Reid JF, Ring BZ, Ringwald M, Rost B, Ruan Y, Salzberg SL,
            Sandelin A, Schneider C, Schonbach C, Sekiguchi K, Semple CA, Seno
            S, Sessa L, Sheng Y, Shibata Y, Shimada H, Shimada K, Silva D,
            Sinclair B, Sperling S, Stupka E, Sugiura K, Sultana R, Takenaka Y,
            Taki K, Tammoja K, Tan SL, Tang S, Taylor MS, Tegner J, Teichmann
            SA, Ueda HR, van Nimwegen E, Verardo R, Wei CL, Yagi K, Yamanishi
            H, Zabarovsky E, Zhu S, Zimmer A, Hide W, Bult C, Grimmond SM,
            Teasdale RD, Liu ET, Brusic V, Quackenbush J, Wahlestedt C, Mattick
            JS, Hume DA, Kai C, Sasaki D, Tomaru Y, Fukuda S, Kanamori-Katayama
            M, Suzuki M, Aoki J, Arakawa T, Iida J, Imamura K, Itoh M, Kato T,
            Kawaji H, Kawagashira N, Kawashima T, Kojima M, Kondo S, Konno H,
            Nakano K, Ninomiya N, Nishio T, Okada M, Plessy C, Shibata K,
            Shiraki T, Suzuki S, Tagami M, Waki K, Watahiki A, Okamura-Oho Y,
            Suzuki H, Kawai J and Hayashizaki Y.
  CONSRTM   FANTOM Consortium; RIKEN Genome Exploration Research Group and
            Genome Science Group (Genome Network Project Core Group)
  TITLE     The transcriptional landscape of the mammalian genome
  JOURNAL   Science 309 (5740), 1559-1563 (2005)
   PUBMED   16141072
  REMARK    Erratum:[Science. 2006 Mar 24;311(5768):1713]
REFERENCE   3  (bases 1 to 2775)
  AUTHORS   Hansen J, Floss T, Van Sloun P, Fuchtbauer EM, Vauti F, Arnold HH,
            Schnutgen F, Wurst W, von Melchner H and Ruiz P.
  TITLE     A large-scale, gene-driven mutagenesis approach for the functional
            analysis of the mouse genome
  JOURNAL   Proc Natl Acad Sci U S A 100 (17), 9918-9922 (2003)
   PUBMED   12904583
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC123045.2.
            
            On Mar 3, 2020 this sequence version replaced XM_011250933.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMN01164134
                              [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-114               AC123045.2         93101-93214
            115-228             AC123045.2         96791-96904
            229-355             AC123045.2         100033-100159
            356-416             AC123045.2         100355-100415
            417-2775            AC123045.2         102634-104992
FEATURES             Location/Qualifiers
     source          1..2775
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7"
     gene            1..2775
                     /gene="Gm35588"
                     /note="predicted gene, 35588"
                     /db_xref="GeneID:102639229"
                     /db_xref="MGI:MGI:5594747"
     exon            1..114
                     /gene="Gm35588"
                     /inference="alignment:Splign:2.1.0"
     exon            115..228
                     /gene="Gm35588"
                     /inference="alignment:Splign:2.1.0"
     CDS             196..1386
                     /gene="Gm35588"
                     /codon_start=1
                     /product="uncharacterized protein LOC102639229"
                     /protein_id="NP_001365605.1"
                     /db_xref="GeneID:102639229"
                     /db_xref="MGI:MGI:5594747"
                     /translation="MPNPQDPTTSLDALTFDDVHVHFTQEEWSLLDPSQKRLYKDVML
                     ETYRNFIAIGYNWEDHNIEEHCQSDKRYRRHERNPAGENQYEYILCDKAFTYHSHLQK
                     HEGIQTQEKPSEGFQHSEVLACHSSLQIHKRTDTGEKPYKCNQCDKSFSQLRYLRVHE
                     RTHTGEKPYVCNQCGKTFAHHCTLHLHRRTHTGEKPYECNQCGKAFAKNSYLQTHKVI
                     HTGEKPFKCNQCDKAYSQQSHLLIHKRTHTGEKPYKCSQCGKSFVSHSHLQAHERIHT
                     GEKPYKCNQCDKAFSQHPSLQMHKRTHTGEKPYKCNQCDKAFAQNSSLQMHTRTHTGE
                     KPYECHQCGKAFSRHSSLQTHKRHHTGEKPYECNHCGEVFAYLSSLQYHKRNHLGEEP
                     YPVL"
     exon            229..355
                     /gene="Gm35588"
                     /inference="alignment:Splign:2.1.0"
     exon            356..416
                     /gene="Gm35588"
                     /inference="alignment:Splign:2.1.0"
     exon            417..2775
                     /gene="Gm35588"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gttggtggtt caatgctgta gctgaggagg cttgagcggt ttgtgtgtcc tgctctgtgt
       61 gctactgctg ggtgccgtga ggggaattca ggcgagctct gaacccgtga catggtcact
      121 cagtgagtgt tcttcttgga gttgacctga attcagatag caactctcaa gtgaggaggc
      181 tcacaaacac ctgctatgcc aaatccacag gatccgacaa cttctctgga tgcattgacc
      241 tttgatgatg tgcatgtaca cttcactcaa gaggagtggt ccttgctgga tccatctcag
      301 aagagacttt acaaagatgt aatgctggag acctacagga acttcattgc tataggatac
      361 aattgggaag accataatat tgaagagcat tgtcaaagtg ataaaagata tagaaggcac
      421 gaaagaaatc ctgctggaga gaaccagtat gaatacatac tgtgtgataa agccttcaca
      481 taccatagtc atcttcaaaa gcatgaagga attcaaactc aagagaaacc ctctgaaggc
      541 tttcaacata gtgaagtcct tgcatgtcat agtagtctcc aaatacataa aagaacagat
      601 actggagaga aaccctacaa atgtaatcaa tgtgataaat ccttttcaca gctcaggtat
      661 cttcgagttc atgaaagaac acatactgga gagaaaccct atgtatgtaa tcaatgtggt
      721 aaaacttttg cacatcactg tactttacac ttgcatagaa gaacacatac tggagagaaa
      781 ccttatgaat gtaatcaatg tggcaaagcc tttgcaaaaa acagttatct tcaaacacat
      841 aaagtaatac atactggaga gaaacccttc aaatgtaatc aatgtgataa agcctattca
      901 caacagagtc atctcctaat acataaaaga acacatactg gagagaaacc ctataaatgt
      961 agtcagtgtg gtaaatcatt tgtatctcac agtcatcttc aagctcatga aagaattcat
     1021 accggagaga aaccttacaa gtgtaatcaa tgtgacaaag ccttttcaca acaccctagt
     1081 ctccaaatgc ataaaagaac acatactgga gagaaaccct acaaatgcaa tcaatgtgat
     1141 aaggcctttg cacaaaacag tagtctccaa atgcatacaa gaacacatac tggagagaaa
     1201 ccttatgaat gtcatcaatg tggtaaagcc ttttcacgtc acagtagtct ccaaacccat
     1261 aaaaggcacc atacaggaga gaagccctat gaatgtaatc actgtggtga agtctttgca
     1321 tatctcagta gtctccagta ccacaaaagg aatcatctgg gagaggaacc ctatccagtt
     1381 ctttaacatg gtaaggcctt tgtggatttc tgtagccttc atcatgaagt attcatactg
     1441 cagagaaacc atatgaatgg aagaaatgtg gtaaagcttt tgtacatcac agttatctct
     1501 taatgtagaa aaaaccagat attagaaatt gttatttgaa gtgttatcaa agtggttcca
     1561 tagcaggatt taatctggca gtttgggaga gtaagctaag tttgtatttg ccagaactgg
     1621 aaaagtgcca aacaagtcaa ttctacaaaa aaaccacccc tcatgggcag ccaatcagga
     1681 gctttagaag ccacccacct agcttgaacc atatatagtt aattatcaaa aattccccaa
     1741 accccccaga gccttagcca atcacagagg caccataccc ctcaagatag aaccaaccaa
     1801 tcaagagaaa gaaaggtaaa agccacccac tcctaaccta acagttttta aattgaccct
     1861 gaaaagccca catctctgtc ttccatcctg gtatatggat aacaatacag ttatgtctga
     1921 atgcataaaa gtagatagac tggagagaaa ctctatgaat gtaatcagtg tggtatagcc
     1981 tttgcataac atgatcatct ttgaatacat aaaaaacata ctgtcgtgaa attctatgaa
     2041 cgtaatcagt gtgataaagc ttttgcatat cacattcatc ttcaaagcca tgaaaggatt
     2101 tatactaaaa agaagcacta tgaaggtatt aaatattatg aagtctttgc acatcccagt
     2161 tatgactgaa tacagaaaag aacacatgct ggagcggaaa attaggaatg tattcagtgt
     2221 ggtaaagact ttgcatatca tagtcatctt tggatatata aaagaacaca tactggagag
     2281 aaaccctaca aatataatca atgagataga gcctttaaac agcacagtca tcttcaaagg
     2341 catgaaagaa agtcatgctg gagagaaact ctatgaatgt ctcaaatatg ttgaagcctt
     2401 tgcacatttt tgtaatcatc atcgtgatag tattcatact ggagagaaat cctatgaatg
     2461 caagaaatgt ggtaaacctt ttgtacataa taggagtcat tgaatgcaaa acatcaactg
     2521 tagagaaacc ttatacatgg actcactgtg gtaaagactg tgcacatcat agtagtctcc
     2581 taatacataa aagaacacat tctggagaga gaccctatga atgtaatcag tgtggtatag
     2641 cctttgcatg tagcatcagt ttttcatgag aaaaaaaaaa tcatactgca gagaagccct
     2701 ataaatgtgt taaagtttta catttcagtg tagtcttttt ttttattgaa gtaataaaat
     2761 ttattttaaa ataaa
//
