LOCUS       NM_001243113            1154 bp    mRNA    linear   ROD 05-AUG-2023
DEFINITION  Mus musculus predicted gene 3409 (Gm3409), mRNA.
ACCESSION   NM_001243113 XM_001476887
VERSION     NM_001243113.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1154)
  AUTHORS   Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, Magen
            A, Canidio E, Pagani M, Peluso I, Lin-Marq N, Koch M, Bilio M,
            Cantiello I, Verde R, De Masi C, Bianchi SA, Cicchini J, Perroud E,
            Mehmeti S, Dagand E, Schrinner S, Nurnberger A, Schmidt K, Metz K,
            Zwingmann C, Brieske N, Springer C, Hernandez AM, Herzog S, Grabbe
            F, Sieverding C, Fischer B, Schrader K, Brockmeyer M, Dettmer S,
            Helbig C, Alunni V, Battaini MA, Mura C, Henrichsen CN,
            Garcia-Lopez R, Echevarria D, Puelles E, Garcia-Calero E, Kruse S,
            Uhr M, Kauck C, Feng G, Milyaev N, Ong CK, Kumar L, Lam M, Semple
            CA, Gyenesei A, Mundlos S, Radelof U, Lehrach H, Sarmientos P,
            Reymond A, Davidson DR, Dolle P, Antonarakis SE, Yaspo ML, Martinez
            S, Baldock RA, Eichele G and Ballabio A.
  TITLE     A high-resolution anatomical atlas of the transcriptome in the
            mouse embryo
  JOURNAL   PLoS Biol 9 (1), e1000582 (2011)
   PUBMED   21267068
  REMARK    Publication Status: Online-Only
COMMENT     PREDICTED REFSEQ: This record has not been reviewed and the
            function is unknown. The reference sequence was derived from
            AC093356.15.
            
            On Jul 23, 2011 this sequence version replaced XM_001476887.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMN00849384
                              [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-160               AC093356.15        167370-167529
            161-363             AC093356.15        167713-167915
            364-411             AC093356.15        168454-168501
            412-605             AC093356.15        169146-169339
            606-1154            AC093356.15        169601-170149
FEATURES             Location/Qualifiers
     source          1..1154
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="5"
                     /map="5 85.23 cM"
     gene            1..1154
                     /gene="Gm3409"
                     /gene_synonym="100041566"
                     /note="predicted gene 3409"
                     /db_xref="GeneID:100041566"
                     /db_xref="MGI:MGI:3781587"
     exon            1..160
                     /gene="Gm3409"
                     /gene_synonym="100041566"
                     /inference="alignment:Splign:2.1.0"
     CDS             29..976
                     /gene="Gm3409"
                     /gene_synonym="100041566"
                     /codon_start=1
                     /product="uncharacterized protein LOC100041566"
                     /protein_id="NP_001230042.1"
                     /db_xref="CCDS:CCDS85006.1"
                     /db_xref="GeneID:100041566"
                     /db_xref="MGI:MGI:3781587"
                     /translation="MFSCFQGSRGSGHKKAKSGFLVRFWRRLIRPLIHFRHASHSEPK
                     VCSQNEQEPDSLPKRPQFNYDSQEYVVQMIHYIPAAIQKRDHICITIFLGVYRTYAST
                     WEVLDLLMRTYASFRPDCIKDQQTKRAIFRFLFGWFKKYPQDFYESPDLAVVRQFIDY
                     VKHNVPSSDVDRARELLSLLEDQEAIELQIEQAPEPSEQDASGRQETLALRPASETEP
                     QGDKQPREDPELVKGAVLDPSEPKATIELPPSLHQAVPTSDGTLSPVDVTADEATGVA
                     ADEAADVAADVSPARQLFVSYTVQLGTPDFVIPLPEVDI"
     exon            161..363
                     /gene="Gm3409"
                     /gene_synonym="100041566"
                     /inference="alignment:Splign:2.1.0"
     exon            364..411
                     /gene="Gm3409"
                     /gene_synonym="100041566"
                     /inference="alignment:Splign:2.1.0"
     exon            412..605
                     /gene="Gm3409"
                     /gene_synonym="100041566"
                     /inference="alignment:Splign:2.1.0"
     exon            606..1154
                     /gene="Gm3409"
                     /gene_synonym="100041566"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cttgtctgga agtcctagag ggaacaagat gttctcctgt ttccagggtt ccagaggctc
       61 cggccacaaa aaagccaaga gcggtttcct tgttcgcttt tggagacgtt tgattcgccc
      121 tctgatacac ttcaggcatg cttcccacag tgagcccaag gtctgttctc aaaatgaaca
      181 ggagccagac tctctgccca agcgccccca gttcaactat gacagccaag aatacgtggt
      241 acaaatgatc cactacattc cagctgctat tcagaaacgt gaccacatct gtatcaccat
      301 atttcttggc gtctaccgaa cgtatgccag cacttgggag gtgctggacc tgctgatgag
      361 aacgtatgca tccttccggc ctgactgtat aaaggaccag caaactaaga gagccatatt
      421 caggtttctg ttcggctggt ttaagaaata cccccaggat ttttatgagt ccccagacct
      481 ggctgttgtg aggcagttca ttgactatgt gaagcacaat gtgccttcct cagatgtaga
      541 tagagccagg gagctgctct ccctgctgga agatcaggag gcaatagagc tacagattga
      601 gcaagctcca gagccctcag agcaggatgc ctctgggagg caggagactc tggctctgag
      661 gccagcttct gagacagagc cacagggaga caagcaaccc cgagaggatc ctgagcttgt
      721 gaaaggagca gttctggatc cctctgaacc aaaagccaca atagagctgc ctccgtcttt
      781 acatcaagct gtgcccacat cagatggtac actctcacct gtagatgtta ctgcagatga
      841 ggcgacaggt gtggctgcag atgaggctgc agatgttgct gcagatgttt cacctgccag
      901 gcagttattt gtgtcttaca ctgtgcagtt aggtacacca gatttcgtca tccctctgcc
      961 tgaggttgac atatagttag gagaatggtc tgcagagttc tacccagctg aggttcccca
     1021 cctaagctta tctcatgttt ttagagacaa tatcttatag ctttgttgga ttctttgttt
     1081 ttcatattgt tgttttcatt tttgtgtttt taattatgtt tgaatattaa taaaaataat
     1141 tatttgttcg tctt
//
