LOCUS       NM_001374156            2436 bp    mRNA    linear   ROD 06-AUG-2023
DEFINITION  Mus musculus predicted gene 3173 (Gm3173), transcript variant 1,
            mRNA.
ACCESSION   NM_001374156 XM_017316307
VERSION     NM_001374156.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2436)
  AUTHORS   Tu S, Shin Y, Zago WM, States BA, Eroshkin A, Lipton SA, Tong GG
            and Nakanishi N.
  TITLE     Takusan: a large gene family that regulates synaptic activity
  JOURNAL   Neuron 55 (1), 69-85 (2007)
   PUBMED   17610818
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC186381.2 and AC196039.1.
            
            On Sep 11, 2019 this sequence version replaced XM_017316307.1.
            
            Transcript Variant: This variant (1) represents the longest
            transcript and encodes the longer isoform (a). Variants 1 and 2
            both encode the same isoform (a).
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR1660815.238943.1 [ECO:0000332]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-425               AC186381.2         17669-18093         c
            426-539             AC186381.2         16183-16296         c
            540-690             AC186381.2         12879-13029         c
            691-825             AC186381.2         2966-3100           c
            826-988             AC186381.2         2071-2233           c
            989-1120            AC186381.2         989-1120            c
            1121-1303           AC186381.2         130-312             c
            1304-2436           AC196039.1         49878-51010         c
FEATURES             Location/Qualifiers
     source          1..2436
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="14"
                     /map="14 2.45 cM"
     gene            1..2436
                     /gene="Gm3173"
                     /gene_synonym="100041162"
                     /note="predicted gene 3173"
                     /db_xref="GeneID:100169868"
                     /db_xref="MGI:MGI:3781352"
     exon            1..425
                     /gene="Gm3173"
                     /gene_synonym="100041162"
                     /inference="alignment:Splign:2.1.0"
     exon            426..539
                     /gene="Gm3173"
                     /gene_synonym="100041162"
                     /inference="alignment:Splign:2.1.0"
     exon            540..690
                     /gene="Gm3173"
                     /gene_synonym="100041162"
                     /inference="alignment:Splign:2.1.0"
     exon            691..825
                     /gene="Gm3173"
                     /gene_synonym="100041162"
                     /inference="alignment:Splign:2.1.0"
     CDS             696..1379
                     /gene="Gm3173"
                     /gene_synonym="100041162"
                     /note="isoform a is encoded by transcript variant 1;
                     alpha4-takusan; alpha27-takusan"
                     /codon_start=1
                     /product="uncharacterized protein LOC100169868 isoform a"
                     /protein_id="NP_001361085.1"
                     /db_xref="GeneID:100169868"
                     /db_xref="MGI:MGI:3781352"
                     /translation="MFSWLLRLFQKENGDEGETRPTEKEEGILSHEKGRRKWFWRRHR
                     SARNTSTQNSKMTKKRSKINELEELKLDMRKISNDIEEMCGILNLYMYEDLNYRMNTE
                     FNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLHENVR
                     ILLNENRRLLVEQAGHKCPVGKKRGSLRRPARTSVSQVPRNSSPAESRTWHRPGHDLP
                     QREVLEEEH"
     exon            826..988
                     /gene="Gm3173"
                     /gene_synonym="100041162"
                     /inference="alignment:Splign:2.1.0"
     exon            989..1120
                     /gene="Gm3173"
                     /gene_synonym="100041162"
                     /inference="alignment:Splign:2.1.0"
     exon            1121..1303
                     /gene="Gm3173"
                     /gene_synonym="100041162"
                     /inference="alignment:Splign:2.1.0"
     exon            1304..2436
                     /gene="Gm3173"
                     /gene_synonym="100041162"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gaccgcccgg tggctgcttt cctttccgcg ccatatatgg cctggcaggg gggggtcaca
       61 tgcatcccgg gccgccggcc gggaggggtc gctggggaag gggcagacgg cgggagaaaa
      121 ggggagaggg tcggaggcag agacaggaga ggggtggggt ggcggattct ggggccatgg
      181 gaggcagcaa aggctcgagg agccgagcgc tcgccactgc gccatggagc tgcactcatg
      241 cggctgcgga ggtggtggtg gaggaaggga cccacgcggg gggcgggggg ggggtgcgaa
      301 cgcgtcggaa gccagagagc gccgtgtccc tgcgctctgt aggtcagcgg gcgcgggccg
      361 gcaggatgga gccgcagcac gtgcgccccg tgcttggatc ccagagccca gcctgggagg
      421 aaatgaaaat cttcagtact cgtctcgcaa catgaacgtt taaagctaaa accttcacag
      481 agatgtgaga tggagcagga gcagtggcta aatgttgaac tcttcaaaac ttggcgtatg
      541 ggctgctggt gtactaccat catccccaac actcctgttc agaagatggg tgaggaaagt
      601 ggaaagccta accactcagc cgatgaccag tgggaaaaat gagctacaag atcacctgat
      661 cttcatcagt gagaaagctt tgcacaagag caggaatgtt ttcctggctg ctcaggctat
      721 ttcagaaaga gaatggcgat gaaggagaga ccagaccaac agagaaggaa gagggaatcc
      781 tttctcatga aaaaggaaga aggaaatggt tctggagaag gcacaggtct gctagaaata
      841 cttcaaccca aaattccaaa atgactaaga agagatcaaa aataaatgaa ctagaagaac
      901 tgaaattgga tatgaggaag atcagcaatg acattgagga aatgtgtgga atcctaaacc
      961 tttacatgta tgaggatttg aactacagga tgaacactga attcaacatc attaaatcac
     1021 aacatgagaa gacaatgttg gatatgaata aaatgatcca gtcaataatt ggttccatgc
     1081 agtactctaa ggaactgata gaagataact attcctacag cattaaggag gaccacctcc
     1141 tccgtgagtg cactcaactc cacgaaaacg taaggatatt actgaatgag aacagaaggc
     1201 tgctggtgga gcaggctggc cacaagtgtc ctgtggggaa gaaaagaggt tctctgagga
     1261 ggccagcaag aacatctgtg tcccaagtgc caaggaacag cagtccagca gaaagcagaa
     1321 catggcacag accaggacat gatctccctc aaagagaagt gctggaggaa gagcactgag
     1381 tgtgcacagg aaatacacca ctgttgcctc tcatccctaa taaccatggc tgtaatgggc
     1441 tgtatgctcc tcctttattt tgtttctttg gtatgaacag gccttaattt catctagcct
     1501 ctggcccagg aagagtgcac atttaaaggg actcagagaa atgctgagac acatcaagag
     1561 ctgctgggca tccaggaaga atctgagtgc aaatttatct tttcctgatg ggtcatcatc
     1621 aataattaca tggagatcag tcaacaaaat tgtaaaacct tggatccaag tctacaacat
     1681 gtgttctgct ttgacttggg aggccatatc cttcagaccc acactccaaa aggagagtgt
     1741 tgcttaaatt tctcctgcaa agatttttac ctgcaggaac tgcttttcta ctaagttgcc
     1801 aaggacagcc acaggctgta aggctgtgct acaaaatgag cagactaaga attttgcttt
     1861 gcacaatttt tgtggtttga ttttggtttg agttttgatt agtttaggta tttggttttt
     1921 cttgttttca ttcaaagttt tgttatttat tggttattta ttgttctttt aagtaatttg
     1981 atattttgat aagattatac acagtacata ttgactgtca gctttcagtt acaattgagt
     2041 acattgcatt tattcttata actaacacag tgatctccaa ctcttcactc taagagcctt
     2101 gttatttcag gtgtgatcat gaaatcccac agatatcaga cccagatgga tctctgcact
     2161 cttcatggga cttgggctcc atagtttctc ctgagccaga ctgaactaca aagtccttca
     2221 tacattcagt atggagagta tgtccaactg tctggatagg aacttaatga tggaaaactt
     2281 acccatgctg catcgttgct gtcaaatatt tagctactgt gaaaatactg tggatgatgg
     2341 tgttgaacgc attaatggca aatacatcag tttttctgta atagctctca ttaaatcaaa
     2401 gcatagtcta agggaataaa aagctgtcag aaaaca
//
