LOCUS       NM_001372229             945 bp    mRNA    linear   ROD 23-FEB-2022
DEFINITION  Mus musculus predicted gene, 30191 (Gm30191), transcript variant 2,
            mRNA.
ACCESSION   NM_001372229 XM_030253973
VERSION     NM_001372229.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 945)
  AUTHORS   Kole C, Berdugo N, Da Silva C, Ait-Ali N, Millet-Puel G, Pagan D,
            Blond F, Poidevin L, Ripp R, Fontaine V, Wincker P, Zack DJ, Sahel
            JA, Poch O and Leveillard T.
  TITLE     Identification of an Alternative Splicing Product of the Otx2 Gene
            Expressed in the Neural Retina and Retinal Pigmented Epithelial
            Cells
  JOURNAL   PLoS One 11 (3), e0150758 (2016)
   PUBMED   26985665
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL627314.6.
            
            On Aug 26, 2019 this sequence version replaced XM_030253973.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR17784644.357507.1,
                                           ERR3363660.2452214.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164136 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-405               AL627314.6         118810-119214
            406-489             AL627314.6         120164-120247
            490-587             AL627314.6         120350-120447
            588-945             AL627314.6         121607-121964
FEATURES             Location/Qualifiers
     source          1..945
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4"
     gene            1..945
                     /gene="Gm30191"
                     /gene_synonym="C4H1orf232"
                     /note="predicted gene, 30191"
                     /db_xref="GeneID:115489946"
                     /db_xref="MGI:MGI:5589350"
     exon            1..405
                     /gene="Gm30191"
                     /gene_synonym="C4H1orf232"
                     /inference="alignment:Splign:2.1.0"
     CDS             316..885
                     /gene="Gm30191"
                     /gene_synonym="C4H1orf232"
                     /note="isoform 2 is encoded by transcript variant 2;
                     chromosome 4 C1orf232 homolog"
                     /codon_start=1
                     /product="uncharacterized protein C1orf232 homolog isoform
                     2"
                     /protein_id="NP_001359158.1"
                     /db_xref="GeneID:115489946"
                     /db_xref="MGI:MGI:5589350"
                     /translation="MREAVADSKDLRSCHTKKIVPTPISAVDTKRESPTLEESEKAEP
                     TEETFNPMSQLARRVQGVGVKGWLTMSSLFNKEDEDKLLPPEPCADHPLAAPPSSQAA
                     TAETEPRGPGFWDAFASRWQQQQQAAASMLRGVETAAERDPEPQDKPDEEATECPETR
                     EADPAAGFKWGFLTHKLAEMRVKAAPKGD"
     exon            406..489
                     /gene="Gm30191"
                     /gene_synonym="C4H1orf232"
                     /inference="alignment:Splign:2.1.0"
     exon            490..587
                     /gene="Gm30191"
                     /gene_synonym="C4H1orf232"
                     /inference="alignment:Splign:2.1.0"
     exon            588..945
                     /gene="Gm30191"
                     /gene_synonym="C4H1orf232"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agagccactg gtgcccactg agctaccagc cttctgtgcc tgagtgccag gacccttttc
       61 ccctgcagcc atgaaccaag ccttctggaa aacttacaag tccaaagtgc tacagacgct
      121 gagtggagaa tctgaagaga acttggcaga ggaggtgggt actgtcctta ttttctaggc
      181 cagacagaca gccagccaag gtagggagca cagagagcat taaatagtct ggggaagaag
      241 acaattgtag gtgggcttcc aaacagcaca gcgcagcgac agagatgttc aagaaaatga
      301 aggagagcta gggccatgag agaagcagtc gctgactcca aggatctcag gagctgccat
      361 acgaaaaaga tcgttccaac gccaatatcg gcagtagaca caaaaaggga gagccccacc
      421 ttggaggagt ctgagaaggc agaacccacg gaggagacgt tcaaccccat gtcacagctg
      481 gcccgcaggg ttcagggggt tggggtgaaa ggctggctga caatgtcatc tctgtttaac
      541 aaagaagacg aggacaaact gctgccacca gagccctgtg ctgatcaccc gctggctgcg
      601 cccccttcct cgcaggcggc cacagctgag accgagccgc gcggaccagg attctgggac
      661 gcgttcgcca gcaggtggca gcagcagcag caggcggcgg cgtccatgct gcgcggcgtg
      721 gagaccgccg cggagaggga cccggagccc caggacaagc ctgacgagga ggctaccgag
      781 tgccccgaga cacgggaggc ggatccagcg gcaggcttca agtggggttt cctcacccac
      841 aaactggcag agatgagggt gaaggctgcg cccaagggcg actagctggc ccgccacgtt
      901 ggtgcccctt cttccctacc tcccataaaa tcgtctggat tgaca
//
