LOCUS       NM_001177580             412 bp    mRNA    linear   ROD 07-OCT-2020
DEFINITION  Mus musculus predicted gene, 21953 (Gm21953), mRNA.
ACCESSION   NM_001177580 XM_001487802 XM_001487803
VERSION     NM_001177580.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 412)
  AUTHORS   Okazaki Y, Furuno M, Kasukawa T, Adachi J, Bono H, Kondo S, Nikaido
            I, Osato N, Saito R, Suzuki H, Yamanaka I, Kiyosawa H, Yagi K,
            Tomaru Y, Hasegawa Y, Nogami A, Schonbach C, Gojobori T, Baldarelli
            R, Hill DP, Bult C, Hume DA, Quackenbush J, Schriml LM, Kanapin A,
            Matsuda H, Batalov S, Beisel KW, Blake JA, Bradt D, Brusic V,
            Chothia C, Corbani LE, Cousins S, Dalla E, Dragani TA, Fletcher CF,
            Forrest A, Frazer KS, Gaasterland T, Gariboldi M, Gissi C, Godzik
            A, Gough J, Grimmond S, Gustincich S, Hirokawa N, Jackson IJ,
            Jarvis ED, Kanai A, Kawaji H, Kawasawa Y, Kedzierski RM, King BL,
            Konagaya A, Kurochkin IV, Lee Y, Lenhard B, Lyons PA, Maglott DR,
            Maltais L, Marchionni L, McKenzie L, Miki H, Nagashima T, Numata K,
            Okido T, Pavan WJ, Pertea G, Pesole G, Petrovsky N, Pillai R,
            Pontius JU, Qi D, Ramachandran S, Ravasi T, Reed JC, Reed DJ, Reid
            J, Ring BZ, Ringwald M, Sandelin A, Schneider C, Semple CA, Setou
            M, Shimada K, Sultana R, Takenaka Y, Taylor MS, Teasdale RD, Tomita
            M, Verardo R, Wagner L, Wahlestedt C, Wang Y, Watanabe Y, Wells C,
            Wilming LG, Wynshaw-Boris A, Yanagisawa M, Yang I, Yang L, Yuan Z,
            Zavolan M, Zhu Y, Zimmer A, Carninci P, Hayatsu N,
            Hirozane-Kishikawa T, Konno H, Nakamura M, Sakazume N, Sato K,
            Shiraki T, Waki K, Kawai J, Aizawa K, Arakawa T, Fukuda S, Hara A,
            Hashizume W, Imotani K, Ishii Y, Itoh M, Kagawa I, Miyazaki A,
            Sakai K, Sasaki D, Shibata K, Shinagawa A, Yasunishi A, Yoshino M,
            Waterston R, Lander ES, Rogers J, Birney E and Hayashizaki Y.
  CONSRTM   FANTOM Consortium; RIKEN Genome Exploration Research Group Phase I
            & II Team
  TITLE     Analysis of the mouse transcriptome based on functional annotation
            of 60,770 full-length cDNAs
  JOURNAL   Nature 420 (6915), 563-573 (2002)
   PUBMED   12466851
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL844494.42 and BY102321.1.
            
            On or before Apr 18, 2010 this sequence version replaced
            XM_001487802.1, XM_001487803.1.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BY102321.1, SRR7345562.1401961.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849376
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-26                AL844494.42        92275-92300         c
            27-334              BY102321.1         2-309
            335-412             AL844494.42        91266-91343         c
FEATURES             Location/Qualifiers
     source          1..412
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4"
     gene            1..412
                     /gene="Gm21953"
                     /gene_synonym="Gm13308"
                     /note="predicted gene, 21953"
                     /db_xref="GeneID:621580"
                     /db_xref="MGI:MGI:5439404"
     exon            1..85
                     /gene="Gm21953"
                     /gene_synonym="Gm13308"
                     /inference="alignment:Splign:2.1.0"
     exon            86..152
                     /gene="Gm21953"
                     /gene_synonym="Gm13308"
                     /inference="alignment:Splign:2.1.0"
     CDS             106..369
                     /gene="Gm21953"
                     /gene_synonym="Gm13308"
                     /codon_start=1
                     /product="C-C motif chemokine 27-like"
                     /protein_id="NP_001171051.1"
                     /db_xref="CCDS:CCDS57271.1"
                     /db_xref="GeneID:621580"
                     /db_xref="MGI:MGI:5439404"
                     /translation="MSRLRRYEVALEAEEEIYWGCFYFFPRLRMWRRERSSAHPREQK
                     LEPLRGLMSCLSSGLRPAPQRSGRGLLCRTPTAAAQTAGALKI"
     exon            153..212
                     /gene="Gm21953"
                     /gene_synonym="Gm13308"
                     /inference="alignment:Splign:2.1.0"
     exon            213..412
                     /gene="Gm21953"
                     /gene_synonym="Gm13308"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgtaattgt taacggtccg tttcccgggc tgagccaggg agggcgggga gtttaggctg
       61 tgccgacccc tgagcccccc ttcaggaacc gttcagagcc tggacatgtc gcgattgagg
      121 agatacgagg tggcgctgga agcggaggag gagatctact ggggctgctt ctactttttt
      181 cctcggttgc gaatgtggcg cagggagcgg agctcggcgc acccccggga gcagaagctg
      241 gagcctctgc ggggcctaat gagctgtttg tcgagcggcc tgaggcctgc tccccagcgc
      301 tcgggtcgtg gtctcctctg tcgcaccccc accgctgctg cacagacagc cggtgcatta
      361 aagatttaaa gtcacgccca ctgcctccct gactttacca ccgcagacgc ca
//
