LOCUS       NM_001270431             377 bp    mRNA    linear   ROD 08-OCT-2020
DEFINITION  Mus musculus predicted gene, 20878 (Gm20878), mRNA.
ACCESSION   NM_001270431 XM_001473379
VERSION     NM_001270431.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 377)
  CONSRTM   IUIS/WHO Subcommittee on Chemokine Nomenclature
  TITLE     Chemokine/chemokine receptor nomenclature
  JOURNAL   J Immunol Methods 262 (1-2), 1-3 (2002)
   PUBMED   12080938
REFERENCE   2  (bases 1 to 377)
  AUTHORS   Nakano H and Gunn MD.
  TITLE     Gene duplications at the chemokine locus on mouse chromosome 4:
            multiple strain-specific haplotypes and the deletion of secondary
            lymphoid-organ chemokine and EBI-1 ligand chemokine genes in the
            plt mutation
  JOURNAL   J Immunol 166 (1), 361-369 (2001)
   PUBMED   11123313
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CT868690.24 and CK137407.1.
            
            On Jul 7, 2012 this sequence version replaced XM_001473379.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: CK137407.1, SRR7345562.1401961.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849376
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-29                CT868690.24        171447-171475       c
            30-373              CK137407.1         1-344
            374-377             CT868690.24        170476-170479       c
FEATURES             Location/Qualifiers
     source          1..377
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4"
     gene            1..377
                     /gene="Gm20878"
                     /note="predicted gene, 20878"
                     /db_xref="GeneID:100041579"
                     /db_xref="MGI:MGI:5434234"
     exon            1..85
                     /gene="Gm20878"
                     /inference="alignment:Splign:2.1.0"
     exon            86..152
                     /gene="Gm20878"
                     /inference="alignment:Splign:2.1.0"
     CDS             106..369
                     /gene="Gm20878"
                     /codon_start=1
                     /product="C-C motif chemokine 27-like"
                     /protein_id="NP_001257360.1"
                     /db_xref="CCDS:CCDS57268.1"
                     /db_xref="GeneID:100041579"
                     /db_xref="MGI:MGI:5434234"
                     /translation="MSRLRRYEVALEAEEEIYWGCFYFFPRLRMWRRERSSAHPREQK
                     LEPLRGLMSCLSSGLRPAPQRSGRGLLCRTPTAAAQTAGALKI"
     exon            153..212
                     /gene="Gm20878"
                     /inference="alignment:Splign:2.1.0"
     exon            213..377
                     /gene="Gm20878"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgtaattgt taacggtccg tttcccgggc tgagccaggg agggcgggga gtttaggctg
       61 tgccgacccc tgagcccccc ttcaggaacc gttcagagcc tggacatgtc gcgattgagg
      121 agatacgagg tggcgctgga agcggaggag gagatctact ggggctgctt ctactttttt
      181 cctcggttgc gaatgtggcg cagggagcgg agctcggcgc acccccggga gcagaagctg
      241 gagcctctgc ggggcctaat gagctgtttg tcgagcggcc tgaggcctgc tccccagcgc
      301 tcgggtcgtg gtctcctctg tcgcaccccc accgctgctg cacagacagc cggtgcatta
      361 aagatttaaa gtcacgc
//
